EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00001015005 (Gene tree)
Gene ID: -
Gene Symbol: Prdm12
Alias: LOC381359
Full Name: PR domain containing 12
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Plus strand
Length: 13408 bases
Position: chrscaffold_3:119624017-119637424
Accession: 2685844
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001014021	zf-C2H2	PF00096.26	8.9e-13	1	2
ENSCGRP00001014021	zf-C2H2	PF00096.26	8.9e-13	2	2
ENSCGRP00001014021	zf-met	PF12874.7	7.7e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001018258	-	1101	-	ENSCGRP00001014021	366 (aa)	-	-

Gene Model

Click here to download ENSCGRG00001015005's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001015005's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00001015005	Prdm12	68	47.273	ENSCGRG00001010581	Prdm5	95	47.273

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001015005	Prdm12	100	98.093	ENSG00000130711	PRDM12	100	98.093	Homo_sapiens
ENSCGRG00001015005	Prdm12	99	75.130	ENSAPOG00000016051	prdm12b	90	80.870	Acanthochromis_polyacanthus
ENSCGRG00001015005	Prdm12	99	64.011	ENSAPOG00000018234	-	93	66.860	Acanthochromis_polyacanthus
ENSCGRG00001015005	Prdm12	88	94.427	ENSAMEG00000016234	PRDM12	99	94.427	Ailuropoda_melanoleuca
ENSCGRG00001015005	Prdm12	90	79.827	ENSACIG00000019578	prdm12b	93	79.943	Amphilophus_citrinellus
ENSCGRG00001015005	Prdm12	99	75.711	ENSACIG00000005193	-	91	80.290	Amphilophus_citrinellus
ENSCGRG00001015005	Prdm12	99	76.178	ENSAOCG00000015040	prdm12b	92	80.571	Amphiprion_ocellaris
ENSCGRG00001015005	Prdm12	99	76.781	ENSAPEG00000015092	prdm12b	92	81.268	Amphiprion_percula
ENSCGRG00001015005	Prdm12	100	72.135	ENSAPEG00000022849	-	89	78.363	Amphiprion_percula
ENSCGRG00001015005	Prdm12	99	74.545	ENSATEG00000014595	-	96	82.371	Anabas_testudineus
ENSCGRG00001015005	Prdm12	93	98.529	ENSANAG00000020616	PRDM12	100	98.529	Aotus_nancymaae
ENSCGRG00001015005	Prdm12	89	81.871	ENSACLG00000007631	-	87	81.871	Astatotilapia_calliptera
ENSCGRG00001015005	Prdm12	99	77.989	ENSACLG00000011876	prdm12b	92	82.440	Astatotilapia_calliptera
ENSCGRG00001015005	Prdm12	99	82.749	ENSAMXG00000033665	prdm12b	90	88.323	Astyanax_mexicanus
ENSCGRG00001015005	Prdm12	99	78.356	ENSAMXG00000008540	PRDM12	90	84.356	Astyanax_mexicanus
ENSCGRG00001015005	Prdm12	100	98.087	ENSBTAG00000023797	PRDM12	100	98.087	Bos_taurus
ENSCGRG00001015005	Prdm12	100	96.995	ENSCJAG00000020540	PRDM12	100	96.995	Callithrix_jacchus
ENSCGRG00001015005	Prdm12	88	97.523	ENSCAFG00000023076	PRDM12	99	97.523	Canis_familiaris
ENSCGRG00001015005	Prdm12	100	98.634	ENSCAFG00020024046	PRDM12	100	98.634	Canis_lupus_dingo
ENSCGRG00001015005	Prdm12	100	98.087	ENSCHIG00000025005	PRDM12	100	98.087	Capra_hircus
ENSCGRG00001015005	Prdm12	93	92.647	ENSCPOG00000005901	PRDM12	95	98.403	Cavia_porcellus
ENSCGRG00001015005	Prdm12	100	97.814	ENSCCAG00000037485	PRDM12	100	97.814	Cebus_capucinus
ENSCGRG00001015005	Prdm12	100	97.814	ENSCATG00000020327	PRDM12	100	97.814	Cercocebus_atys
ENSCGRG00001015005	Prdm12	91	98.204	ENSCLAG00000005499	PRDM12	92	98.204	Chinchilla_lanigera
ENSCGRG00001015005	Prdm12	100	98.087	ENSCSAG00000014756	PRDM12	100	98.087	Chlorocebus_sabaeus
ENSCGRG00001015005	Prdm12	100	88.525	ENSCPBG00000022628	PRDM12	94	92.814	Chrysemys_picta_bellii
ENSCGRG00001015005	Prdm12	99	77.333	ENSCVAG00000017166	prdm12b	92	82.405	Cyprinodon_variegatus
ENSCGRG00001015005	Prdm12	99	72.564	ENSCVAG00000000944	-	90	77.778	Cyprinodon_variegatus
ENSCGRG00001015005	Prdm12	99	81.283	ENSDARG00000007430	prdm12b	93	85.965	Danio_rerio
ENSCGRG00001015005	Prdm12	99	97.541	ENSDNOG00000042302	PRDM12	99	97.541	Dasypus_novemcinctus
ENSCGRG00001015005	Prdm12	88	62.393	ENSEBUG00000016780	prdm12b	78	63.818	Eptatretus_burgeri
ENSCGRG00001015005	Prdm12	100	97.541	ENSEASG00005008472	PRDM12	100	97.541	Equus_asinus_asinus
ENSCGRG00001015005	Prdm12	100	97.268	ENSECAG00000005933	PRDM12	100	97.268	Equus_caballus
ENSCGRG00001015005	Prdm12	99	79.947	ENSELUG00000009905	prdm12b	91	86.012	Esox_lucius
ENSCGRG00001015005	Prdm12	99	75.881	ENSELUG00000013674	PRDM12	89	83.333	Esox_lucius
ENSCGRG00001015005	Prdm12	100	98.361	ENSFCAG00000043086	PRDM12	100	98.361	Felis_catus
ENSCGRG00001015005	Prdm12	100	88.798	ENSFALG00000001445	PRDM12	84	93.114	Ficedula_albicollis
ENSCGRG00001015005	Prdm12	99	75.926	ENSFHEG00000003944	prdm12b	92	81.395	Fundulus_heteroclitus
ENSCGRG00001015005	Prdm12	99	73.657	ENSFHEG00000007746	-	88	80.236	Fundulus_heteroclitus
ENSCGRG00001015005	Prdm12	91	82.282	ENSGMOG00000011797	prdm12b	94	82.282	Gadus_morhua
ENSCGRG00001015005	Prdm12	100	88.798	ENSGALG00000003895	PRDM12	94	93.114	Gallus_gallus
ENSCGRG00001015005	Prdm12	100	77.067	ENSGAFG00000010827	prdm12b	90	82.301	Gambusia_affinis
ENSCGRG00001015005	Prdm12	100	78.191	ENSGACG00000016713	prdm12b	91	83.728	Gasterosteus_aculeatus
ENSCGRG00001015005	Prdm12	100	88.798	ENSGAGG00000014083	PRDM12	94	93.114	Gopherus_agassizii
ENSCGRG00001015005	Prdm12	100	98.087	ENSGGOG00000010568	PRDM12	100	98.087	Gorilla_gorilla
ENSCGRG00001015005	Prdm12	99	76.517	ENSHBUG00000022878	prdm12b	93	80.692	Haplochromis_burtoni
ENSCGRG00001015005	Prdm12	89	81.871	ENSHBUG00000022537	-	80	81.871	Haplochromis_burtoni
ENSCGRG00001015005	Prdm12	100	97.268	ENSHGLG00000013939	PRDM12	100	97.268	Heterocephalus_glaber_female
ENSCGRG00001015005	Prdm12	89	80.994	ENSHCOG00000003663	prdm12b	89	79.656	Hippocampus_comes
ENSCGRG00001015005	Prdm12	99	72.849	ENSHCOG00000021167	-	95	76.471	Hippocampus_comes
ENSCGRG00001015005	Prdm12	99	75.881	ENSIPUG00000019544	PRDM12	90	82.012	Ictalurus_punctatus
ENSCGRG00001015005	Prdm12	99	81.671	ENSIPUG00000017053	prdm12b	91	87.126	Ictalurus_punctatus
ENSCGRG00001015005	Prdm12	99	95.041	ENSSTOG00000005986	PRDM12	87	99.701	Ictidomys_tridecemlineatus
ENSCGRG00001015005	Prdm12	90	99.394	ENSJJAG00000005424	Prdm12	100	99.394	Jaculus_jaculus
ENSCGRG00001015005	Prdm12	99	75.610	ENSKMAG00000021205	-	92	81.651	Kryptolebias_marmoratus
ENSCGRG00001015005	Prdm12	89	78.212	ENSKMAG00000016921	prdm12b	89	78.492	Kryptolebias_marmoratus
ENSCGRG00001015005	Prdm12	99	74.677	ENSLBEG00000007776	-	89	81.602	Labrus_bergylta
ENSCGRG00001015005	Prdm12	99	76.984	ENSLBEG00000017769	prdm12b	88	84.132	Labrus_bergylta
ENSCGRG00001015005	Prdm12	99	86.027	ENSLACG00000017560	PRDM12	94	90.090	Latimeria_chalumnae
ENSCGRG00001015005	Prdm12	99	80.863	ENSLOCG00000005429	prdm12b	93	86.431	Lepisosteus_oculatus
ENSCGRG00001015005	Prdm12	91	97.353	ENSLAFG00000006979	PRDM12	91	97.353	Loxodonta_africana
ENSCGRG00001015005	Prdm12	100	92.098	ENSMFAG00000040322	PRDM12	91	98.503	Macaca_fascicularis
ENSCGRG00001015005	Prdm12	100	97.814	ENSMNEG00000037234	PRDM12	100	97.814	Macaca_nemestrina
ENSCGRG00001015005	Prdm12	99	75.584	ENSMAMG00000013212	prdm12b	90	83.383	Mastacembelus_armatus
ENSCGRG00001015005	Prdm12	89	81.250	ENSMAMG00000018988	-	86	81.548	Mastacembelus_armatus
ENSCGRG00001015005	Prdm12	89	81.871	ENSMZEG00005000415	PRDM12	86	81.871	Maylandia_zebra
ENSCGRG00001015005	Prdm12	93	92.962	ENSMGAG00000005438	PRDM12	94	93.114	Meleagris_gallopavo
ENSCGRG00001015005	Prdm12	100	97.814	ENSMAUG00000013040	Prdm12	100	97.814	Mesocricetus_auratus
ENSCGRG00001015005	Prdm12	100	96.995	ENSMICG00000015480	PRDM12	100	96.995	Microcebus_murinus
ENSCGRG00001015005	Prdm12	98	96.089	ENSMOCG00000021026	Prdm12	93	99.708	Microtus_ochrogaster
ENSCGRG00001015005	Prdm12	100	90.710	ENSMODG00000012108	PRDM12	94	95.210	Monodelphis_domestica
ENSCGRG00001015005	Prdm12	99	66.133	ENSMALG00000021901	prdm12b	88	71.171	Monopterus_albus
ENSCGRG00001015005	Prdm12	100	99.454	MGP_CAROLIEiJ_G0023414	Prdm12	100	99.454	Mus_caroli
ENSCGRG00001015005	Prdm12	100	99.454	ENSMUSG00000079466	Prdm12	100	99.454	Mus_musculus
ENSCGRG00001015005	Prdm12	100	99.454	MGP_PahariEiJ_G0024871	Prdm12	100	99.454	Mus_pahari
ENSCGRG00001015005	Prdm12	100	99.454	MGP_SPRETEiJ_G0024331	Prdm12	100	99.454	Mus_spretus
ENSCGRG00001015005	Prdm12	100	95.082	ENSNGAG00000018480	Prdm12	100	95.082	Nannospalax_galili
ENSCGRG00001015005	Prdm12	99	72.074	ENSNBRG00000024312	-	95	76.608	Neolamprologus_brichardi
ENSCGRG00001015005	Prdm12	99	75.393	ENSNBRG00000006727	prdm12b	93	80.000	Neolamprologus_brichardi
ENSCGRG00001015005	Prdm12	100	80.601	ENSMEUG00000003828	PRDM12	94	84.132	Notamacropus_eugenii
ENSCGRG00001015005	Prdm12	90	97.879	ENSOPRG00000008680	PRDM12	100	97.879	Ochotona_princeps
ENSCGRG00001015005	Prdm12	94	98.542	ENSODEG00000016282	PRDM12	64	98.542	Octodon_degus
ENSCGRG00001015005	Prdm12	63	88.646	ENSOANG00000001043	PRDM12	91	96.447	Ornithorhynchus_anatinus
ENSCGRG00001015005	Prdm12	86	92.652	ENSOCUG00000008241	PRDM12	98	93.770	Oryctolagus_cuniculus
ENSCGRG00001015005	Prdm12	100	75.979	ENSORLG00000007114	prdm12b	92	81.556	Oryzias_latipes
ENSCGRG00001015005	Prdm12	99	72.308	ENSORLG00000017558	-	87	80.352	Oryzias_latipes
ENSCGRG00001015005	Prdm12	90	80.980	ENSORLG00020019565	prdm12b	91	81.268	Oryzias_latipes_hni
ENSCGRG00001015005	Prdm12	99	72.123	ENSORLG00020013167	-	87	80.117	Oryzias_latipes_hni
ENSCGRG00001015005	Prdm12	90	80.692	ENSORLG00015007621	prdm12b	92	81.322	Oryzias_latipes_hsok
ENSCGRG00001015005	Prdm12	99	72.308	ENSORLG00015003435	-	87	80.352	Oryzias_latipes_hsok
ENSCGRG00001015005	Prdm12	99	73.454	ENSOMEG00000007762	-	94	78.632	Oryzias_melastigma
ENSCGRG00001015005	Prdm12	100	75.389	ENSOMEG00000004134	prdm12b	91	80.571	Oryzias_melastigma
ENSCGRG00001015005	Prdm12	91	99.099	ENSOGAG00000007557	PRDM12	100	99.099	Otolemur_garnettii
ENSCGRG00001015005	Prdm12	78	97.561	ENSPPAG00000031506	-	99	95.904	Pan_paniscus
ENSCGRG00001015005	Prdm12	100	86.104	ENSPPRG00000023024	PRDM12	86	90.149	Panthera_pardus
ENSCGRG00001015005	Prdm12	100	98.361	ENSPTRG00000021475	PRDM12	100	98.361	Pan_troglodytes
ENSCGRG00001015005	Prdm12	100	98.361	ENSPTRG00000043324	-	100	98.361	Pan_troglodytes
ENSCGRG00001015005	Prdm12	100	97.814	ENSPANG00000025967	PRDM12	100	97.814	Papio_anubis
ENSCGRG00001015005	Prdm12	93	78.348	ENSPKIG00000004305	PRDM12	94	80.539	Paramormyrops_kingsleyae
ENSCGRG00001015005	Prdm12	99	80.263	ENSPKIG00000007228	prdm12b	94	85.345	Paramormyrops_kingsleyae
ENSCGRG00001015005	Prdm12	100	88.525	ENSPSIG00000006739	PRDM12	94	92.814	Pelodiscus_sinensis
ENSCGRG00001015005	Prdm12	99	72.846	ENSPMGG00000002356	-	88	80.655	Periophthalmus_magnuspinnatus
ENSCGRG00001015005	Prdm12	100	76.702	ENSPMGG00000008867	prdm12b	92	82.799	Periophthalmus_magnuspinnatus
ENSCGRG00001015005	Prdm12	91	100.000	ENSPEMG00000009969	Prdm12	91	100.000	Peromyscus_maniculatus_bairdii
ENSCGRG00001015005	Prdm12	100	90.984	ENSPCIG00000024119	PRDM12	94	95.509	Phascolarctos_cinereus
ENSCGRG00001015005	Prdm12	99	77.454	ENSPFOG00000019841	prdm12b	93	81.924	Poecilia_formosa
ENSCGRG00001015005	Prdm12	90	83.036	ENSPLAG00000016626	prdm12b	90	82.596	Poecilia_latipinna
ENSCGRG00001015005	Prdm12	97	76.630	ENSPMEG00000016698	prdm12b	89	82.067	Poecilia_mexicana
ENSCGRG00001015005	Prdm12	96	73.077	ENSPREG00000003211	-	90	77.982	Poecilia_reticulata
ENSCGRG00001015005	Prdm12	100	76.963	ENSPREG00000015073	prdm12b	89	82.456	Poecilia_reticulata
ENSCGRG00001015005	Prdm12	96	96.296	ENSPPYG00000019694	PRDM12	95	97.904	Pongo_abelii
ENSCGRG00001015005	Prdm12	100	98.907	ENSPCOG00000022255	PRDM12	100	98.907	Propithecus_coquereli
ENSCGRG00001015005	Prdm12	100	98.087	ENSPVAG00000001511	PRDM12	100	98.087	Pteropus_vampyrus
ENSCGRG00001015005	Prdm12	89	81.871	ENSPNYG00000013589	-	86	81.871	Pundamilia_nyererei
ENSCGRG00001015005	Prdm12	99	75.853	ENSPNYG00000009607	prdm12b	93	79.943	Pundamilia_nyererei
ENSCGRG00001015005	Prdm12	99	74.531	ENSPNAG00000013396	PRDM12	88	80.547	Pygocentrus_nattereri
ENSCGRG00001015005	Prdm12	99	82.574	ENSPNAG00000024532	prdm12b	91	88.922	Pygocentrus_nattereri
ENSCGRG00001015005	Prdm12	100	99.454	ENSRNOG00000009218	Prdm12	100	99.454	Rattus_norvegicus
ENSCGRG00001015005	Prdm12	87	98.423	ENSRBIG00000042712	PRDM12	91	96.049	Rhinopithecus_bieti
ENSCGRG00001015005	Prdm12	88	98.442	ENSRROG00000043554	PRDM12	100	98.442	Rhinopithecus_roxellana
ENSCGRG00001015005	Prdm12	100	90.736	ENSSHAG00000015972	PRDM12	94	95.224	Sarcophilus_harrisii
ENSCGRG00001015005	Prdm12	99	74.807	ENSSMAG00000003754	prdm12b	90	80.627	Scophthalmus_maximus
ENSCGRG00001015005	Prdm12	93	81.395	ENSSDUG00000019071	-	90	83.486	Seriola_dumerili
ENSCGRG00001015005	Prdm12	99	75.258	ENSSDUG00000023498	prdm12b	90	81.214	Seriola_dumerili
ENSCGRG00001015005	Prdm12	99	77.717	ENSSLDG00000013562	-	93	84.356	Seriola_lalandi_dorsalis
ENSCGRG00001015005	Prdm12	99	75.844	ENSSLDG00000009557	prdm12b	90	82.216	Seriola_lalandi_dorsalis
ENSCGRG00001015005	Prdm12	100	88.251	ENSSPUG00000013424	PRDM12	94	92.515	Sphenodon_punctatus
ENSCGRG00001015005	Prdm12	99	66.321	ENSSPAG00000022420	-	87	74.769	Stegastes_partitus
ENSCGRG00001015005	Prdm12	99	75.718	ENSSPAG00000018824	prdm12b	90	81.871	Stegastes_partitus
ENSCGRG00001015005	Prdm12	100	98.634	ENSSSCG00000005703	PRDM12	100	98.634	Sus_scrofa
ENSCGRG00001015005	Prdm12	99	76.842	ENSTRUG00000018659	prdm12b	92	82.405	Takifugu_rubripes
ENSCGRG00001015005	Prdm12	99	74.799	ENSTRUG00000013239	-	93	81.325	Takifugu_rubripes
ENSCGRG00001015005	Prdm12	99	75.405	ENSTNIG00000005859	-	92	81.155	Tetraodon_nigroviridis
ENSCGRG00001015005	Prdm12	99	77.165	ENSTNIG00000009020	prdm12b	91	83.481	Tetraodon_nigroviridis
ENSCGRG00001015005	Prdm12	95	98.281	ENSUAMG00000009653	PRDM12	97	98.281	Ursus_americanus
ENSCGRG00001015005	Prdm12	91	99.096	ENSVVUG00000027662	PRDM12	79	99.096	Vulpes_vulpes
ENSCGRG00001015005	Prdm12	100	77.748	ENSXCOG00000002836	prdm12b	91	82.596	Xiphophorus_couchianus
ENSCGRG00001015005	Prdm12	99	77.333	ENSXMAG00000005537	prdm12b	91	82.111	Xiphophorus_maculatus
ENSCGRG00001015005	Prdm12	99	74.219	ENSXMAG00000028012	-	88	80.294	Xiphophorus_maculatus