EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00001015021 (Gene tree)
Gene ID: -
Gene Symbol: Tnrc6a
Alias: 2010321I05Rik|3110054G10Rik|CAGH26|D130023A07Rik|Tnrc6
Full Name: trinucleotide repeat containing 6a
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Plus strand
Length: 77036 bases
Position: chrscaffold_9:17215754-17292789
Accession: 2385292
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001014053	Ago_hook	PF10427.9	7.8e-19	1	1
ENSCGRP00001014057	Ago_hook	PF10427.9	1.3e-16	1	1
ENSCGRP00001014061	Ago_hook	PF10427.9	1.4e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001018298	-	5916	-	ENSCGRP00001014061	1906 (aa)	-	-
ENSCGRT00001018290	-	5712	-	ENSCGRP00001014053	1903 (aa)	-	-
ENSCGRT00001018294	-	5709	-	ENSCGRP00001014057	1902 (aa)	-	-

Gene Model

Click here to download ENSCGRG00001015021's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001015021's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00001015021	Tnrc6a	96	36.042	ENSCGRG00001020166	Tnrc6b	97	37.911
ENSCGRG00001015021	Tnrc6a	99	40.891	ENSCGRG00001022686	Tnrc6c	99	41.381

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001015021	Tnrc6a	100	94.619	ENSG00000090905	TNRC6A	100	94.723	Homo_sapiens
ENSCGRG00001015021	Tnrc6a	99	94.201	ENSAMEG00000009333	TNRC6A	100	94.201	Ailuropoda_melanoleuca
ENSCGRG00001015021	Tnrc6a	99	80.952	ENSAPLG00000009978	TNRC6A	100	80.743	Anas_platyrhynchos
ENSCGRG00001015021	Tnrc6a	100	53.272	ENSACAG00000011857	TNRC6A	100	55.007	Anolis_carolinensis
ENSCGRG00001015021	Tnrc6a	100	94.500	ENSANAG00000025252	TNRC6A	100	94.605	Aotus_nancymaae
ENSCGRG00001015021	Tnrc6a	93	56.203	ENSAMXG00000019919	tnrc6a	99	57.101	Astyanax_mexicanus
ENSCGRG00001015021	Tnrc6a	100	93.333	ENSBTAG00000017999	TNRC6A	100	92.913	Bos_taurus
ENSCGRG00001015021	Tnrc6a	99	93.805	ENSCJAG00000020677	TNRC6A	100	92.890	Callithrix_jacchus
ENSCGRG00001015021	Tnrc6a	99	93.881	ENSCAFG00000017531	TNRC6A	99	93.827	Canis_familiaris
ENSCGRG00001015021	Tnrc6a	99	92.715	ENSCAFG00020021160	TNRC6A	99	92.715	Canis_lupus_dingo
ENSCGRG00001015021	Tnrc6a	100	93.333	ENSCHIG00000019448	TNRC6A	100	93.015	Capra_hircus
ENSCGRG00001015021	Tnrc6a	100	94.188	ENSTSYG00000012711	TNRC6A	100	94.398	Carlito_syrichta
ENSCGRG00001015021	Tnrc6a	99	94.745	ENSCPOG00000036684	TNRC6A	100	94.587	Cavia_porcellus
ENSCGRG00001015021	Tnrc6a	100	94.401	ENSCCAG00000033664	TNRC6A	100	94.610	Cebus_capucinus
ENSCGRG00001015021	Tnrc6a	99	94.380	ENSCATG00000019284	TNRC6A	99	94.380	Cercocebus_atys
ENSCGRG00001015021	Tnrc6a	100	89.843	ENSCLAG00000010217	TNRC6A	100	90.052	Chinchilla_lanigera
ENSCGRG00001015021	Tnrc6a	99	94.720	ENSCSAG00000006561	TNRC6A	98	94.828	Chlorocebus_sabaeus
ENSCGRG00001015021	Tnrc6a	95	89.592	ENSCHOG00000009374	TNRC6A	92	89.796	Choloepus_hoffmanni
ENSCGRG00001015021	Tnrc6a	91	81.120	ENSCPBG00000001881	TNRC6A	99	81.005	Chrysemys_picta_bellii
ENSCGRG00001015021	Tnrc6a	100	94.921	ENSCANG00000041549	TNRC6A	100	94.921	Colobus_angolensis_palliatus
ENSCGRG00001015021	Tnrc6a	99	99.369	ENSCGRG00000013351	Tnrc6a	99	99.369	Cricetulus_griseus_crigri
ENSCGRG00001015021	Tnrc6a	93	56.515	ENSDARG00000079688	tnrc6a	99	57.143	Danio_rerio
ENSCGRG00001015021	Tnrc6a	99	91.990	ENSDNOG00000013989	TNRC6A	99	92.203	Dasypus_novemcinctus
ENSCGRG00001015021	Tnrc6a	99	84.050	ENSETEG00000014658	TNRC6A	99	83.954	Echinops_telfairi
ENSCGRG00001015021	Tnrc6a	100	94.856	ENSEASG00005017693	TNRC6A	100	94.908	Equus_asinus_asinus
ENSCGRG00001015021	Tnrc6a	99	94.806	ENSECAG00000025056	TNRC6A	99	94.861	Equus_caballus
ENSCGRG00001015021	Tnrc6a	99	87.213	ENSEEUG00000004530	TNRC6A	99	87.272	Erinaceus_europaeus
ENSCGRG00001015021	Tnrc6a	100	93.026	ENSFCAG00000025236	TNRC6A	100	93.078	Felis_catus
ENSCGRG00001015021	Tnrc6a	99	78.509	ENSFALG00000003757	TNRC6A	97	78.778	Ficedula_albicollis
ENSCGRG00001015021	Tnrc6a	93	79.148	ENSGALG00000006068	TNRC6A	99	81.268	Gallus_gallus
ENSCGRG00001015021	Tnrc6a	91	80.391	ENSGAGG00000023209	TNRC6A	99	80.564	Gopherus_agassizii
ENSCGRG00001015021	Tnrc6a	100	94.053	ENSGGOG00000005137	TNRC6A	99	94.412	Gorilla_gorilla
ENSCGRG00001015021	Tnrc6a	94	73.195	ENSHGLG00000007368	-	93	73.139	Heterocephalus_glaber_female
ENSCGRG00001015021	Tnrc6a	99	92.891	ENSHGLG00000012474	-	100	92.838	Heterocephalus_glaber_female
ENSCGRG00001015021	Tnrc6a	99	92.413	ENSHGLG00100012496	-	100	92.202	Heterocephalus_glaber_male
ENSCGRG00001015021	Tnrc6a	99	93.326	ENSSTOG00000023394	TNRC6A	99	90.992	Ictidomys_tridecemlineatus
ENSCGRG00001015021	Tnrc6a	99	69.378	ENSLACG00000006277	TNRC6A	100	69.741	Latimeria_chalumnae
ENSCGRG00001015021	Tnrc6a	99	82.561	ENSLOCG00000005517	tnrc6a	93	82.561	Lepisosteus_oculatus
ENSCGRG00001015021	Tnrc6a	98	93.595	ENSLAFG00000004209	TNRC6A	99	93.484	Loxodonta_africana
ENSCGRG00001015021	Tnrc6a	99	92.980	ENSMFAG00000003824	TNRC6A	99	93.136	Macaca_fascicularis
ENSCGRG00001015021	Tnrc6a	100	94.555	ENSMMUG00000020428	TNRC6A	100	94.660	Macaca_mulatta
ENSCGRG00001015021	Tnrc6a	100	94.427	ENSMNEG00000034854	TNRC6A	100	94.427	Macaca_nemestrina
ENSCGRG00001015021	Tnrc6a	99	92.687	ENSMLEG00000042737	TNRC6A	97	92.479	Mandrillus_leucophaeus
ENSCGRG00001015021	Tnrc6a	99	79.005	ENSMGAG00000006455	TNRC6A	99	76.643	Meleagris_gallopavo
ENSCGRG00001015021	Tnrc6a	100	98.686	ENSMAUG00000012750	Tnrc6a	100	98.686	Mesocricetus_auratus
ENSCGRG00001015021	Tnrc6a	100	95.455	ENSMICG00000030685	TNRC6A	100	95.350	Microcebus_murinus
ENSCGRG00001015021	Tnrc6a	100	98.056	ENSMOCG00000000152	Tnrc6a	100	98.056	Microtus_ochrogaster
ENSCGRG00001015021	Tnrc6a	99	81.096	ENSMODG00000016348	TNRC6A	99	78.486	Monodelphis_domestica
ENSCGRG00001015021	Tnrc6a	99	96.023	MGP_CAROLIEiJ_G0030425	Tnrc6a	100	96.426	Mus_caroli
ENSCGRG00001015021	Tnrc6a	100	96.689	ENSMUSG00000052707	Tnrc6a	100	96.689	Mus_musculus
ENSCGRG00001015021	Tnrc6a	99	96.820	MGP_PahariEiJ_G0013635	Tnrc6a	100	97.069	Mus_pahari
ENSCGRG00001015021	Tnrc6a	99	96.588	MGP_SPRETEiJ_G0031539	Tnrc6a	100	96.712	Mus_spretus
ENSCGRG00001015021	Tnrc6a	97	83.028	ENSMPUG00000012324	TNRC6A	100	82.705	Mustela_putorius_furo
ENSCGRG00001015021	Tnrc6a	99	91.737	ENSMLUG00000002701	TNRC6A	100	91.368	Myotis_lucifugus
ENSCGRG00001015021	Tnrc6a	99	95.483	ENSNGAG00000020702	Tnrc6a	100	95.273	Nannospalax_galili
ENSCGRG00001015021	Tnrc6a	99	91.697	ENSNLEG00000011851	TNRC6A	98	92.884	Nomascus_leucogenys
ENSCGRG00001015021	Tnrc6a	76	88.164	ENSMEUG00000015959	-	74	87.832	Notamacropus_eugenii
ENSCGRG00001015021	Tnrc6a	95	98.881	ENSOPRG00000005819	TNRC6A	96	98.881	Ochotona_princeps
ENSCGRG00001015021	Tnrc6a	99	89.024	ENSODEG00000012802	TNRC6A	99	88.700	Octodon_degus
ENSCGRG00001015021	Tnrc6a	90	82.166	ENSOANG00000007672	TNRC6A	99	81.983	Ornithorhynchus_anatinus
ENSCGRG00001015021	Tnrc6a	99	91.689	ENSOCUG00000004325	TNRC6A	100	91.478	Oryctolagus_cuniculus
ENSCGRG00001015021	Tnrc6a	99	94.759	ENSOGAG00000006666	TNRC6A	98	94.657	Otolemur_garnettii
ENSCGRG00001015021	Tnrc6a	99	92.476	ENSOARG00000017950	TNRC6A	98	93.364	Ovis_aries
ENSCGRG00001015021	Tnrc6a	100	93.965	ENSPPAG00000028379	TNRC6A	100	94.471	Pan_paniscus
ENSCGRG00001015021	Tnrc6a	100	93.026	ENSPPRG00000005861	TNRC6A	100	93.078	Panthera_pardus
ENSCGRG00001015021	Tnrc6a	99	92.002	ENSPTIG00000006346	TNRC6A	99	92.002	Panthera_tigris_altaica
ENSCGRG00001015021	Tnrc6a	100	93.968	ENSPTRG00000007898	TNRC6A	99	94.020	Pan_troglodytes
ENSCGRG00001015021	Tnrc6a	100	91.967	ENSPANG00000018523	TNRC6A	100	92.123	Papio_anubis
ENSCGRG00001015021	Tnrc6a	90	75.369	ENSPKIG00000012859	tnrc6a	99	75.369	Paramormyrops_kingsleyae
ENSCGRG00001015021	Tnrc6a	77	77.214	ENSPSIG00000003965	TNRC6A	99	77.079	Pelodiscus_sinensis
ENSCGRG00001015021	Tnrc6a	100	97.739	ENSPEMG00000016318	Tnrc6a	100	97.791	Peromyscus_maniculatus_bairdii
ENSCGRG00001015021	Tnrc6a	99	82.581	ENSPCIG00000012106	TNRC6A	100	82.686	Phascolarctos_cinereus
ENSCGRG00001015021	Tnrc6a	99	93.845	ENSPPYG00000007202	TNRC6A	98	94.056	Pongo_abelii
ENSCGRG00001015021	Tnrc6a	95	98.969	ENSPCAG00000008260	TNRC6A	94	98.969	Procavia_capensis
ENSCGRG00001015021	Tnrc6a	100	92.577	ENSPCOG00000010134	TNRC6A	100	92.682	Propithecus_coquereli
ENSCGRG00001015021	Tnrc6a	89	70.991	ENSPVAG00000012066	TNRC6A	97	70.519	Pteropus_vampyrus
ENSCGRG00001015021	Tnrc6a	100	96.190	ENSRNOG00000024737	Tnrc6a	100	96.190	Rattus_norvegicus
ENSCGRG00001015021	Tnrc6a	99	94.662	ENSRBIG00000014222	TNRC6A	99	94.718	Rhinopithecus_bieti
ENSCGRG00001015021	Tnrc6a	99	94.913	ENSRROG00000032360	TNRC6A	98	94.969	Rhinopithecus_roxellana
ENSCGRG00001015021	Tnrc6a	99	93.760	ENSSBOG00000036197	TNRC6A	99	95.230	Saimiri_boliviensis_boliviensis
ENSCGRG00001015021	Tnrc6a	91	82.678	ENSSHAG00000008811	TNRC6A	99	82.963	Sarcophilus_harrisii
ENSCGRG00001015021	Tnrc6a	90	67.216	ENSSFOG00015008920	tnrc6a	99	69.115	Scleropages_formosus
ENSCGRG00001015021	Tnrc6a	74	83.152	ENSSARG00000002479	TNRC6A	89	83.877	Sorex_araneus
ENSCGRG00001015021	Tnrc6a	93	77.815	ENSSPUG00000010525	TNRC6A	100	77.871	Sphenodon_punctatus
ENSCGRG00001015021	Tnrc6a	100	93.219	ENSSSCG00000038870	TNRC6A	99	95.347	Sus_scrofa
ENSCGRG00001015021	Tnrc6a	99	78.788	ENSTGUG00000006142	TNRC6A	100	79.206	Taeniopygia_guttata
ENSCGRG00001015021	Tnrc6a	99	91.854	ENSTBEG00000014965	TNRC6A	100	92.010	Tupaia_belangeri
ENSCGRG00001015021	Tnrc6a	93	95.474	ENSTTRG00000002008	TNRC6A	90	95.366	Tursiops_truncatus
ENSCGRG00001015021	Tnrc6a	79	93.396	ENSUAMG00000006656	-	93	93.396	Ursus_americanus
ENSCGRG00001015021	Tnrc6a	99	94.105	ENSUMAG00000008274	TNRC6A	99	95.512	Ursus_maritimus
ENSCGRG00001015021	Tnrc6a	56	83.739	ENSVPAG00000010764	-	57	83.628	Vicugna_pacos
ENSCGRG00001015021	Tnrc6a	95	98.919	ENSVVUG00000005380	TNRC6A	99	93.779	Vulpes_vulpes
ENSCGRG00001015021	Tnrc6a	96	65.360	ENSXETG00000030437	TNRC6A	99	65.553	Xenopus_tropicalis