EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00001015432 (Gene tree)
Gene ID: -
Gene Symbol: Gfi1
Alias: Gfi-1|Pal-1|Pal1
Full Name: growth factor independent 1 transcription repressor
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Minus strand
Length: 6666 bases
Position: chrscaffold_4:2397740-2404405
Accession: 103170
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001014601	zf-C2H2	PF00096.26	2.6e-28	1	6
ENSCGRP00001014601	zf-C2H2	PF00096.26	2.6e-28	2	6
ENSCGRP00001014601	zf-C2H2	PF00096.26	2.6e-28	3	6
ENSCGRP00001014601	zf-C2H2	PF00096.26	2.6e-28	4	6
ENSCGRP00001014601	zf-C2H2	PF00096.26	2.6e-28	5	6
ENSCGRP00001014601	zf-C2H2	PF00096.26	2.6e-28	6	6
ENSCGRP00001014601	zf-met	PF12874.7	1.5e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001018838	-	1269	-	ENSCGRP00001014601	422 (aa)	-	-

Gene Model

Click here to download ENSCGRG00001015432's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001015432's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00001015432	Gfi1	50	38.462	ENSCGRG00001010581	Prdm5	74	41.463
ENSCGRG00001015432	Gfi1	56	40.462	ENSCGRG00001019408	Zbtb17	55	40.462
ENSCGRG00001015432	Gfi1	53	44.048	ENSCGRG00001023858	Zfp560	63	44.048
ENSCGRG00001015432	Gfi1	50	45.238	ENSCGRG00001020646	Gm3854	58	45.238
ENSCGRG00001015432	Gfi1	52	40.268	ENSCGRG00001024630	-	83	38.372
ENSCGRG00001015432	Gfi1	57	36.364	ENSCGRG00001006591	Zkscan3	57	43.836
ENSCGRG00001015432	Gfi1	53	42.857	ENSCGRG00001012523	-	88	42.857

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001015432	Gfi1	100	86.493	ENSG00000162676	GFI1	100	86.493	Homo_sapiens
ENSCGRG00001015432	Gfi1	100	62.383	ENSAPOG00000015189	gfi1ab	100	62.238	Acanthochromis_polyacanthus
ENSCGRG00001015432	Gfi1	100	62.911	ENSACIG00000016354	gfi1ab	100	62.383	Amphilophus_citrinellus
ENSCGRG00001015432	Gfi1	100	54.292	ENSAOCG00000008339	gfi1ab	100	54.060	Amphiprion_ocellaris
ENSCGRG00001015432	Gfi1	100	63.170	ENSAPEG00000023870	gfi1ab	100	62.673	Amphiprion_percula
ENSCGRG00001015432	Gfi1	100	59.434	ENSATEG00000009167	gfi1ab	89	57.920	Anabas_testudineus
ENSCGRG00001015432	Gfi1	88	71.314	ENSAPLG00000015700	GFI1	100	70.777	Anas_platyrhynchos
ENSCGRG00001015432	Gfi1	100	69.355	ENSACAG00000004498	GFI1	100	69.124	Anolis_carolinensis
ENSCGRG00001015432	Gfi1	100	84.597	ENSANAG00000019656	GFI1	100	84.597	Aotus_nancymaae
ENSCGRG00001015432	Gfi1	100	62.617	ENSACLG00000026458	gfi1ab	93	62.383	Astatotilapia_calliptera
ENSCGRG00001015432	Gfi1	54	87.568	ENSAMXG00000006669	GFI1	73	87.568	Astyanax_mexicanus
ENSCGRG00001015432	Gfi1	100	58.676	ENSAMXG00000039600	gfi1ab	100	57.991	Astyanax_mexicanus
ENSCGRG00001015432	Gfi1	100	85.545	ENSBTAG00000016723	GFI1	100	85.545	Bos_taurus
ENSCGRG00001015432	Gfi1	100	83.886	ENSCJAG00000017609	GFI1	100	83.886	Callithrix_jacchus
ENSCGRG00001015432	Gfi1	100	86.256	ENSCAFG00000020155	GFI1	100	86.256	Canis_familiaris
ENSCGRG00001015432	Gfi1	100	86.256	ENSCAFG00020013371	GFI1	88	86.256	Canis_lupus_dingo
ENSCGRG00001015432	Gfi1	100	85.308	ENSCHIG00000016135	GFI1	100	85.308	Capra_hircus
ENSCGRG00001015432	Gfi1	100	87.915	ENSCPOG00000011727	GFI1	100	86.256	Cavia_porcellus
ENSCGRG00001015432	Gfi1	100	84.597	ENSCCAG00000036072	GFI1	100	84.597	Cebus_capucinus
ENSCGRG00001015432	Gfi1	100	86.019	ENSCATG00000037873	GFI1	100	86.019	Cercocebus_atys
ENSCGRG00001015432	Gfi1	100	82.227	ENSCLAG00000005915	GFI1	100	81.567	Chinchilla_lanigera
ENSCGRG00001015432	Gfi1	86	84.066	ENSCSAG00000001469	GFI1	100	84.066	Chlorocebus_sabaeus
ENSCGRG00001015432	Gfi1	100	86.019	ENSCANG00000034077	GFI1	100	86.019	Colobus_angolensis_palliatus
ENSCGRG00001015432	Gfi1	100	57.506	ENSCSEG00000017729	GFI1	100	57.506	Cynoglossus_semilaevis
ENSCGRG00001015432	Gfi1	100	58.314	ENSCVAG00000004930	GFI1	100	58.469	Cyprinodon_variegatus
ENSCGRG00001015432	Gfi1	100	58.548	ENSCVAG00000011828	gfi1ab	100	59.251	Cyprinodon_variegatus
ENSCGRG00001015432	Gfi1	100	62.383	ENSDARG00000044457	gfi1ab	100	62.383	Danio_rerio
ENSCGRG00001015432	Gfi1	100	83.452	ENSDNOG00000000782	GFI1	97	85.106	Dasypus_novemcinctus
ENSCGRG00001015432	Gfi1	100	83.529	ENSEBUG00000008075	gfi1ab	57	83.529	Eptatretus_burgeri
ENSCGRG00001015432	Gfi1	100	85.343	ENSEASG00005015509	GFI1	86	85.343	Equus_asinus_asinus
ENSCGRG00001015432	Gfi1	92	78.920	ENSECAG00000006647	GFI1	92	78.920	Equus_caballus
ENSCGRG00001015432	Gfi1	100	79.147	ENSEEUG00000000198	GFI1	100	79.384	Erinaceus_europaeus
ENSCGRG00001015432	Gfi1	100	63.805	ENSELUG00000003015	gfi1ab	99	62.181	Esox_lucius
ENSCGRG00001015432	Gfi1	100	58.216	ENSELUG00000019033	GFI1	100	57.044	Esox_lucius
ENSCGRG00001015432	Gfi1	100	87.204	ENSFCAG00000005914	GFI1	100	87.204	Felis_catus
ENSCGRG00001015432	Gfi1	100	57.110	ENSFHEG00000000341	GFI1	100	57.437	Fundulus_heteroclitus
ENSCGRG00001015432	Gfi1	100	60.829	ENSFHEG00000010997	gfi1ab	100	59.674	Fundulus_heteroclitus
ENSCGRG00001015432	Gfi1	100	61.916	ENSGMOG00000007737	gfi1ab	100	61.449	Gadus_morhua
ENSCGRG00001015432	Gfi1	100	70.998	ENSGALG00000043650	GFI1	100	70.534	Gallus_gallus
ENSCGRG00001015432	Gfi1	100	60.417	ENSGAFG00000016637	gfi1ab	100	60.185	Gambusia_affinis
ENSCGRG00001015432	Gfi1	100	59.165	ENSGAFG00000018063	GFI1	100	59.861	Gambusia_affinis
ENSCGRG00001015432	Gfi1	100	62.824	ENSGACG00000004257	gfi1ab	97	62.061	Gasterosteus_aculeatus
ENSCGRG00001015432	Gfi1	100	86.493	ENSGGOG00000005320	GFI1	100	86.493	Gorilla_gorilla
ENSCGRG00001015432	Gfi1	100	61.557	ENSHBUG00000011969	gfi1ab	100	62.118	Haplochromis_burtoni
ENSCGRG00001015432	Gfi1	100	87.204	ENSHGLG00000008020	GFI1	100	87.204	Heterocephalus_glaber_female
ENSCGRG00001015432	Gfi1	100	87.204	ENSHGLG00100000610	GFI1	100	87.204	Heterocephalus_glaber_male
ENSCGRG00001015432	Gfi1	100	55.738	ENSHCOG00000019555	GFI1	100	55.269	Hippocampus_comes
ENSCGRG00001015432	Gfi1	100	52.455	ENSHCOG00000008590	gfi1ab	100	50.670	Hippocampus_comes
ENSCGRG00001015432	Gfi1	100	62.028	ENSIPUG00000010071	gfi1ab	87	61.163	Ictalurus_punctatus
ENSCGRG00001015432	Gfi1	100	57.309	ENSIPUG00000013414	GFI1	100	56.613	Ictalurus_punctatus
ENSCGRG00001015432	Gfi1	100	87.204	ENSSTOG00000014583	GFI1	100	87.204	Ictidomys_tridecemlineatus
ENSCGRG00001015432	Gfi1	100	60.656	ENSKMAG00000003810	gfi1ab	100	59.485	Kryptolebias_marmoratus
ENSCGRG00001015432	Gfi1	100	63.700	ENSLBEG00000027776	gfi1ab	100	62.471	Labrus_bergylta
ENSCGRG00001015432	Gfi1	100	67.290	ENSLACG00000013362	GFI1	98	67.290	Latimeria_chalumnae
ENSCGRG00001015432	Gfi1	99	77.222	ENSLACG00000017590	-	99	77.222	Latimeria_chalumnae
ENSCGRG00001015432	Gfi1	100	66.047	ENSLOCG00000004711	gfi1ab	100	65.349	Lepisosteus_oculatus
ENSCGRG00001015432	Gfi1	100	79.858	ENSLAFG00000018346	GFI1	100	80.095	Loxodonta_africana
ENSCGRG00001015432	Gfi1	100	86.019	ENSMFAG00000045801	GFI1	100	86.019	Macaca_fascicularis
ENSCGRG00001015432	Gfi1	100	86.019	ENSMNEG00000036338	GFI1	100	86.019	Macaca_nemestrina
ENSCGRG00001015432	Gfi1	100	86.019	ENSMLEG00000036181	GFI1	100	86.019	Mandrillus_leucophaeus
ENSCGRG00001015432	Gfi1	100	62.676	ENSMAMG00000008125	gfi1ab	100	62.037	Mastacembelus_armatus
ENSCGRG00001015432	Gfi1	100	62.676	ENSMZEG00005009895	gfi1ab	100	62.617	Maylandia_zebra
ENSCGRG00001015432	Gfi1	87	72.973	ENSMGAG00000008187	GFI1	99	72.432	Meleagris_gallopavo
ENSCGRG00001015432	Gfi1	100	87.441	ENSMICG00000047208	GFI1	100	87.441	Microcebus_murinus
ENSCGRG00001015432	Gfi1	100	56.542	ENSMMOG00000005556	gfi1ab	88	91.398	Mola_mola
ENSCGRG00001015432	Gfi1	100	75.057	ENSMODG00000011802	GFI1	100	75.638	Monodelphis_domestica
ENSCGRG00001015432	Gfi1	100	61.466	ENSMALG00000014672	gfi1ab	100	61.176	Monopterus_albus
ENSCGRG00001015432	Gfi1	100	93.144	MGP_CAROLIEiJ_G0027508	Gfi1	100	100.000	Mus_caroli
ENSCGRG00001015432	Gfi1	100	92.199	ENSMUSG00000029275	Gfi1	100	92.199	Mus_musculus
ENSCGRG00001015432	Gfi1	100	91.962	MGP_PahariEiJ_G0017280	Gfi1	100	100.000	Mus_pahari
ENSCGRG00001015432	Gfi1	100	92.199	MGP_SPRETEiJ_G0028507	Gfi1	100	92.199	Mus_spretus
ENSCGRG00001015432	Gfi1	100	78.199	ENSMPUG00000004178	GFI1	97	78.199	Mustela_putorius_furo
ENSCGRG00001015432	Gfi1	100	83.255	ENSMLUG00000015191	GFI1	97	82.547	Myotis_lucifugus
ENSCGRG00001015432	Gfi1	100	61.731	ENSNBRG00000015774	gfi1ab	100	58.916	Neolamprologus_brichardi
ENSCGRG00001015432	Gfi1	93	84.399	ENSNLEG00000010470	GFI1	97	84.399	Nomascus_leucogenys
ENSCGRG00001015432	Gfi1	100	86.019	ENSOPRG00000001473	GFI1	100	86.019	Ochotona_princeps
ENSCGRG00001015432	Gfi1	100	62.207	ENSONIG00000019246	gfi1ab	100	62.150	Oreochromis_niloticus
ENSCGRG00001015432	Gfi1	86	81.967	ENSOCUG00000023553	GFI1	93	82.514	Oryctolagus_cuniculus
ENSCGRG00001015432	Gfi1	100	58.726	ENSORLG00000013806	gfi1ab	100	59.859	Oryzias_latipes
ENSCGRG00001015432	Gfi1	100	59.070	ENSORLG00000005060	GFI1	100	57.968	Oryzias_latipes
ENSCGRG00001015432	Gfi1	100	59.670	ENSORLG00020001602	gfi1ab	100	59.390	Oryzias_latipes_hni
ENSCGRG00001015432	Gfi1	73	63.226	ENSORLG00020002817	GFI1	90	60.856	Oryzias_latipes_hni
ENSCGRG00001015432	Gfi1	100	58.645	ENSORLG00015006070	GFI1	100	58.178	Oryzias_latipes_hsok
ENSCGRG00001015432	Gfi1	100	58.080	ENSOMEG00000016722	GFI1	100	57.576	Oryzias_melastigma
ENSCGRG00001015432	Gfi1	100	72.941	ENSOGAG00000027913	GFI1	100	74.645	Otolemur_garnettii
ENSCGRG00001015432	Gfi1	69	97.143	ENSOARG00000016329	GFI1	84	97.143	Ovis_aries
ENSCGRG00001015432	Gfi1	100	73.882	ENSPPAG00000042186	GFI1	100	75.355	Pan_paniscus
ENSCGRG00001015432	Gfi1	100	87.204	ENSPPRG00000007521	GFI1	100	87.204	Panthera_pardus
ENSCGRG00001015432	Gfi1	100	86.256	ENSPTRG00000043053	GFI1	100	86.256	Pan_troglodytes
ENSCGRG00001015432	Gfi1	100	86.019	ENSPANG00000016433	GFI1	100	86.019	Papio_anubis
ENSCGRG00001015432	Gfi1	100	63.594	ENSPKIG00000004263	GFI1	100	63.364	Paramormyrops_kingsleyae
ENSCGRG00001015432	Gfi1	88	71.850	ENSPSIG00000008734	GFI1	97	71.046	Pelodiscus_sinensis
ENSCGRG00001015432	Gfi1	100	59.765	ENSPMGG00000012546	gfi1ab	100	59.765	Periophthalmus_magnuspinnatus
ENSCGRG00001015432	Gfi1	100	75.581	ENSPCIG00000013728	GFI1	100	75.581	Phascolarctos_cinereus
ENSCGRG00001015432	Gfi1	100	61.176	ENSPFOG00000023214	gfi1ab	100	60.941	Poecilia_formosa
ENSCGRG00001015432	Gfi1	100	60.000	ENSPLAG00000005376	GFI1	91	60.233	Poecilia_latipinna
ENSCGRG00001015432	Gfi1	100	61.176	ENSPLAG00000010879	gfi1ab	98	76.471	Poecilia_latipinna
ENSCGRG00001015432	Gfi1	100	61.176	ENSPMEG00000013694	gfi1ab	100	60.941	Poecilia_mexicana
ENSCGRG00001015432	Gfi1	100	60.000	ENSPMEG00000019299	GFI1	100	60.000	Poecilia_mexicana
ENSCGRG00001015432	Gfi1	100	52.596	ENSPREG00000007997	GFI1	100	52.822	Poecilia_reticulata
ENSCGRG00001015432	Gfi1	100	61.176	ENSPREG00000014097	gfi1ab	100	60.235	Poecilia_reticulata
ENSCGRG00001015432	Gfi1	100	72.235	ENSPCAG00000011020	GFI1	100	72.706	Procavia_capensis
ENSCGRG00001015432	Gfi1	100	87.441	ENSPCOG00000020540	GFI1	100	87.441	Propithecus_coquereli
ENSCGRG00001015432	Gfi1	100	83.886	ENSPVAG00000006928	GFI1	100	84.123	Pteropus_vampyrus
ENSCGRG00001015432	Gfi1	100	62.441	ENSPNYG00000021183	gfi1ab	100	62.383	Pundamilia_nyererei
ENSCGRG00001015432	Gfi1	58	50.206	ENSPNAG00000014299	-	61	57.868	Pygocentrus_nattereri
ENSCGRG00001015432	Gfi1	100	58.986	ENSPNAG00000027258	gfi1ab	100	57.737	Pygocentrus_nattereri
ENSCGRG00001015432	Gfi1	100	91.253	ENSRNOG00000002042	Gfi1	100	91.253	Rattus_norvegicus
ENSCGRG00001015432	Gfi1	100	86.019	ENSRBIG00000036467	GFI1	100	86.019	Rhinopithecus_bieti
ENSCGRG00001015432	Gfi1	100	86.019	ENSRROG00000031687	GFI1	100	86.019	Rhinopithecus_roxellana
ENSCGRG00001015432	Gfi1	100	84.360	ENSSBOG00000031300	GFI1	100	84.360	Saimiri_boliviensis_boliviensis
ENSCGRG00001015432	Gfi1	100	65.888	ENSSFOG00015020295	gfi1	100	64.486	Scleropages_formosus
ENSCGRG00001015432	Gfi1	100	62.529	ENSSMAG00000002782	gfi1ab	100	61.395	Scophthalmus_maximus
ENSCGRG00001015432	Gfi1	100	61.085	ENSSDUG00000022410	gfi1ab	100	60.190	Seriola_dumerili
ENSCGRG00001015432	Gfi1	100	60.849	ENSSLDG00000020163	gfi1ab	100	59.953	Seriola_lalandi_dorsalis
ENSCGRG00001015432	Gfi1	81	81.250	ENSSPAG00000009140	gfi1ab	99	81.250	Stegastes_partitus
ENSCGRG00001015432	Gfi1	100	84.597	ENSSSCG00000006902	GFI1	100	85.308	Sus_scrofa
ENSCGRG00001015432	Gfi1	88	71.698	ENSTGUG00000006060	GFI1	100	71.159	Taeniopygia_guttata
ENSCGRG00001015432	Gfi1	100	58.974	ENSTRUG00000000415	gfi1ab	100	58.581	Takifugu_rubripes
ENSCGRG00001015432	Gfi1	100	58.782	ENSTNIG00000000651	gfi1ab	97	59.624	Tetraodon_nigroviridis
ENSCGRG00001015432	Gfi1	100	85.071	ENSTTRG00000000082	GFI1	100	85.071	Tursiops_truncatus
ENSCGRG00001015432	Gfi1	100	82.270	ENSUAMG00000021124	GFI1	91	82.270	Ursus_americanus
ENSCGRG00001015432	Gfi1	100	67.217	ENSXETG00000023006	gfi1	98	65.647	Xenopus_tropicalis
ENSCGRG00001015432	Gfi1	52	80.734	ENSXCOG00000013213	-	63	80.734	Xiphophorus_couchianus
ENSCGRG00001015432	Gfi1	100	51.989	ENSXMAG00000009274	GFI1	70	52.910	Xiphophorus_maculatus
ENSCGRG00001015432	Gfi1	100	61.176	ENSXMAG00000010523	gfi1ab	100	60.000	Xiphophorus_maculatus