EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCGRG00001015599 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Plus strand
Length: 33255 bases
Position: chrscaffold_16:43539557-43572811
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001014829	RNA_pol_Rpb1_5	PF04998.17	2.7e-49	1	1
ENSCGRP00001014829	RNA_pol_Rpb1_4	PF05000.17	4.8e-32	1	1
ENSCGRP00001014829	RNA_pol_Rpb1_2	PF00623.20	6.6e-75	1	1
ENSCGRP00001014829	RNA_pol_Rpb1_3	PF04983.18	1e-41	1	1
ENSCGRP00001014829	RNA_pol_Rpb1_1	PF04997.12	4.9e-97	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001019067	-	3522	-	ENSCGRP00001014829	1174 (aa)	-	-

Gene Model

Click here to download ENSCGRG00001015599's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001015599's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001015599	-	92	98.718	ENSG00000148606	POLR3A	95	97.895	Homo_sapiens
ENSCGRG00001015599	-	73	86.411	ENSAPOG00000022727	polr3a	99	86.411	Acanthochromis_polyacanthus
ENSCGRG00001015599	-	92	98.176	ENSAMEG00000017801	POLR3A	78	98.176	Ailuropoda_melanoleuca
ENSCGRG00001015599	-	92	91.667	ENSACIG00000024504	polr3a	81	91.667	Amphilophus_citrinellus
ENSCGRG00001015599	-	92	89.020	ENSAOCG00000003949	-	78	89.020	Amphiprion_ocellaris
ENSCGRG00001015599	-	92	90.743	ENSAOCG00000002071	polr3a	78	90.743	Amphiprion_ocellaris
ENSCGRG00001015599	-	92	90.743	ENSAPEG00000013351	polr3a	78	90.743	Amphiprion_percula
ENSCGRG00001015599	-	92	90.743	ENSAPEG00000001966	-	78	90.743	Amphiprion_percula
ENSCGRG00001015599	-	92	90.385	ENSATEG00000023277	polr3a	78	90.385	Anabas_testudineus
ENSCGRG00001015599	-	91	96.827	ENSAPLG00000015878	POLR3A	77	96.827	Anas_platyrhynchos
ENSCGRG00001015599	-	92	94.231	ENSACAG00000007985	POLR3A	82	94.231	Anolis_carolinensis
ENSCGRG00001015599	-	92	98.718	ENSANAG00000028922	POLR3A	78	98.718	Aotus_nancymaae
ENSCGRG00001015599	-	92	89.882	ENSACLG00000005914	polr3a	79	89.648	Astatotilapia_calliptera
ENSCGRG00001015599	-	92	90.385	ENSAMXG00000018852	polr3a	77	90.385	Astyanax_mexicanus
ENSCGRG00001015599	-	92	98.385	ENSBTAG00000013259	POLR3A	78	98.385	Bos_taurus
ENSCGRG00001015599	-	92	59.936	WBGene00004411	rpc-1	77	59.936	Caenorhabditis_elegans
ENSCGRG00001015599	-	92	98.718	ENSCJAG00000001015	POLR3A	78	98.718	Callithrix_jacchus
ENSCGRG00001015599	-	92	98.708	ENSCAFG00000015546	POLR3A	79	98.391	Canis_familiaris
ENSCGRG00001015599	-	92	98.708	ENSCAFG00020014711	POLR3A	78	98.708	Canis_lupus_dingo
ENSCGRG00001015599	-	92	98.278	ENSCHIG00000000352	POLR3A	78	98.278	Capra_hircus
ENSCGRG00001015599	-	92	98.170	ENSTSYG00000006671	POLR3A	78	98.170	Carlito_syrichta
ENSCGRG00001015599	-	91	97.484	ENSCAPG00000016031	POLR3A	78	97.484	Cavia_aperea
ENSCGRG00001015599	-	92	97.417	ENSCPOG00000022387	POLR3A	78	97.417	Cavia_porcellus
ENSCGRG00001015599	-	94	98.718	ENSCCAG00000032995	POLR3A	80	98.718	Cebus_capucinus
ENSCGRG00001015599	-	92	98.278	ENSCATG00000035842	POLR3A	78	98.278	Cercocebus_atys
ENSCGRG00001015599	-	92	97.524	ENSCLAG00000009629	POLR3A	78	97.524	Chinchilla_lanigera
ENSCGRG00001015599	-	92	98.718	ENSCSAG00000009292	POLR3A	78	98.718	Chlorocebus_sabaeus
ENSCGRG00001015599	-	78	94.737	ENSCHOG00000008368	POLR3A	77	94.737	Choloepus_hoffmanni
ENSCGRG00001015599	-	92	96.154	ENSCPBG00000002079	POLR3A	78	96.154	Chrysemys_picta_bellii
ENSCGRG00001015599	-	94	73.011	ENSCSAVG00000009925	-	78	73.011	Ciona_savignyi
ENSCGRG00001015599	-	76	98.077	ENSCANG00000041071	POLR3A	73	98.077	Colobus_angolensis_palliatus
ENSCGRG00001015599	-	100	87.277	ENSCGRG00000001019	Polr3a	96	87.277	Cricetulus_griseus_crigri
ENSCGRG00001015599	-	92	90.850	ENSCSEG00000016653	polr3a	78	90.850	Cynoglossus_semilaevis
ENSCGRG00001015599	-	92	90.097	ENSCVAG00000023049	polr3a	78	90.097	Cyprinodon_variegatus
ENSCGRG00001015599	-	92	91.389	ENSDARG00000102569	polr3a	78	91.389	Danio_rerio
ENSCGRG00001015599	-	92	98.062	ENSDNOG00000010194	POLR3A	78	98.062	Dasypus_novemcinctus
ENSCGRG00001015599	-	92	98.718	ENSDORG00000000184	Polr3a	78	98.718	Dipodomys_ordii
ENSCGRG00001015599	-	94	61.135	FBgn0030687	CG17209	79	61.135	Drosophila_melanogaster
ENSCGRG00001015599	-	83	98.701	ENSETEG00000007477	POLR3A	71	98.701	Echinops_telfairi
ENSCGRG00001015599	-	70	76.698	ENSEBUG00000013761	polr3a	98	76.698	Eptatretus_burgeri
ENSCGRG00001015599	-	92	98.718	ENSEASG00005023053	POLR3A	78	98.718	Equus_asinus_asinus
ENSCGRG00001015599	-	92	98.718	ENSECAG00000019416	POLR3A	81	98.718	Equus_caballus
ENSCGRG00001015599	-	90	95.371	ENSEEUG00000001774	POLR3A	79	95.371	Erinaceus_europaeus
ENSCGRG00001015599	-	92	89.103	ENSELUG00000014016	polr3a	78	89.103	Esox_lucius
ENSCGRG00001015599	-	92	98.816	ENSFCAG00000000843	POLR3A	78	98.816	Felis_catus
ENSCGRG00001015599	-	92	96.233	ENSFALG00000006913	POLR3A	78	96.233	Ficedula_albicollis
ENSCGRG00001015599	-	92	97.436	ENSFDAG00000007813	POLR3A	78	97.436	Fukomys_damarensis
ENSCGRG00001015599	-	86	91.973	ENSFHEG00000011922	polr3a	76	91.973	Fundulus_heteroclitus
ENSCGRG00001015599	-	93	90.385	ENSGMOG00000000291	polr3a	78	90.385	Gadus_morhua
ENSCGRG00001015599	-	92	96.663	ENSGALG00000004947	POLR3A	78	96.663	Gallus_gallus
ENSCGRG00001015599	-	92	89.989	ENSGAFG00000005112	polr3a	78	89.989	Gambusia_affinis
ENSCGRG00001015599	-	93	89.103	ENSGACG00000002304	polr3a	78	89.882	Gasterosteus_aculeatus
ENSCGRG00001015599	-	91	96.154	ENSGAGG00000010386	POLR3A	79	96.154	Gopherus_agassizii
ENSCGRG00001015599	-	92	98.718	ENSGGOG00000027729	POLR3A	77	98.718	Gorilla_gorilla
ENSCGRG00001015599	-	92	89.774	ENSHBUG00000018098	polr3a	78	89.774	Haplochromis_burtoni
ENSCGRG00001015599	-	93	97.527	ENSHGLG00000017899	POLR3A	78	97.632	Heterocephalus_glaber_female
ENSCGRG00001015599	-	93	97.527	ENSHGLG00100008483	POLR3A	78	97.632	Heterocephalus_glaber_male
ENSCGRG00001015599	-	95	88.462	ENSHCOG00000001075	polr3a	80	88.462	Hippocampus_comes
ENSCGRG00001015599	-	54	86.950	ENSIPUG00000001706	polr3a	96	86.950	Ictalurus_punctatus
ENSCGRG00001015599	-	92	98.718	ENSSTOG00000012983	POLR3A	78	98.718	Ictidomys_tridecemlineatus
ENSCGRG00001015599	-	54	88.365	ENSJJAG00000016217	-	98	88.365	Jaculus_jaculus
ENSCGRG00001015599	-	92	90.635	ENSKMAG00000015290	polr3a	79	90.635	Kryptolebias_marmoratus
ENSCGRG00001015599	-	92	91.026	ENSLBEG00000017214	polr3a	78	91.026	Labrus_bergylta
ENSCGRG00001015599	-	92	92.949	ENSLACG00000018557	POLR3A	80	92.949	Latimeria_chalumnae
ENSCGRG00001015599	-	92	92.949	ENSLOCG00000004942	polr3a	78	92.949	Lepisosteus_oculatus
ENSCGRG00001015599	-	92	98.170	ENSLAFG00000016719	POLR3A	78	98.170	Loxodonta_africana
ENSCGRG00001015599	-	92	98.718	ENSMFAG00000032218	POLR3A	78	98.718	Macaca_fascicularis
ENSCGRG00001015599	-	92	98.718	ENSMMUG00000005514	POLR3A	78	98.718	Macaca_mulatta
ENSCGRG00001015599	-	88	93.284	ENSMNEG00000035163	POLR3A	80	98.130	Macaca_nemestrina
ENSCGRG00001015599	-	92	98.718	ENSMLEG00000030014	POLR3A	77	98.718	Mandrillus_leucophaeus
ENSCGRG00001015599	-	92	90.385	ENSMAMG00000017497	polr3a	78	90.385	Mastacembelus_armatus
ENSCGRG00001015599	-	92	89.882	ENSMZEG00005000576	polr3a	78	89.882	Maylandia_zebra
ENSCGRG00001015599	-	92	95.513	ENSMGAG00000005713	-	78	95.513	Meleagris_gallopavo
ENSCGRG00001015599	-	92	99.359	ENSMAUG00000016247	Polr3a	78	99.359	Mesocricetus_auratus
ENSCGRG00001015599	-	92	98.601	ENSMICG00000005937	POLR3A	78	98.601	Microcebus_murinus
ENSCGRG00001015599	-	92	99.359	ENSMOCG00000012185	Polr3a	78	99.359	Microtus_ochrogaster
ENSCGRG00001015599	-	92	89.451	ENSMMOG00000013822	polr3a	78	89.451	Mola_mola
ENSCGRG00001015599	-	92	97.632	ENSMODG00000001036	POLR3A	78	97.632	Monodelphis_domestica
ENSCGRG00001015599	-	92	90.385	ENSMALG00000001249	polr3a	78	90.385	Monopterus_albus
ENSCGRG00001015599	-	92	99.462	MGP_CAROLIEiJ_G0019016	Polr3a	78	99.462	Mus_caroli
ENSCGRG00001015599	-	92	99.462	ENSMUSG00000025280	Polr3a	99	98.600	Mus_musculus
ENSCGRG00001015599	-	92	99.359	MGP_PahariEiJ_G0030029	Polr3a	78	99.359	Mus_pahari
ENSCGRG00001015599	-	92	99.359	MGP_SPRETEiJ_G0019894	Polr3a	78	99.359	Mus_spretus
ENSCGRG00001015599	-	92	98.708	ENSMPUG00000003790	POLR3A	77	98.708	Mustela_putorius_furo
ENSCGRG00001015599	-	92	98.077	ENSMLUG00000011522	POLR3A	78	98.077	Myotis_lucifugus
ENSCGRG00001015599	-	92	98.718	ENSNGAG00000015863	Polr3a	78	98.718	Nannospalax_galili
ENSCGRG00001015599	-	93	90.108	ENSNBRG00000014262	polr3a	80	90.108	Neolamprologus_brichardi
ENSCGRG00001015599	-	79	97.243	ENSNLEG00000010501	POLR3A	69	97.243	Nomascus_leucogenys
ENSCGRG00001015599	-	86	93.548	ENSMEUG00000012446	POLR3A	74	93.548	Notamacropus_eugenii
ENSCGRG00001015599	-	92	97.436	ENSOPRG00000001880	-	78	97.436	Ochotona_princeps
ENSCGRG00001015599	-	92	96.154	ENSODEG00000015146	POLR3A	78	96.154	Octodon_degus
ENSCGRG00001015599	-	92	90.312	ENSONIG00000016129	polr3a	78	90.312	Oreochromis_niloticus
ENSCGRG00001015599	-	91	97.026	ENSOANG00000007013	POLR3A	78	97.026	Ornithorhynchus_anatinus
ENSCGRG00001015599	-	92	98.077	ENSOCUG00000012450	POLR3A	78	98.077	Oryctolagus_cuniculus
ENSCGRG00001015599	-	92	90.527	ENSORLG00000008958	polr3a	78	90.527	Oryzias_latipes
ENSCGRG00001015599	-	92	90.527	ENSORLG00020007525	polr3a	79	90.527	Oryzias_latipes_hni
ENSCGRG00001015599	-	92	90.527	ENSORLG00015006633	polr3a	78	90.527	Oryzias_latipes_hsok
ENSCGRG00001015599	-	92	90.385	ENSOMEG00000012865	polr3a	78	90.385	Oryzias_melastigma
ENSCGRG00001015599	-	92	98.278	ENSOGAG00000010995	POLR3A	78	98.278	Otolemur_garnettii
ENSCGRG00001015599	-	92	98.067	ENSOARG00000009656	POLR3A	78	98.067	Ovis_aries
ENSCGRG00001015599	-	55	96.250	ENSPPAG00000041726	-	99	96.250	Pan_paniscus
ENSCGRG00001015599	-	92	98.816	ENSPPRG00000002128	POLR3A	78	98.816	Panthera_pardus
ENSCGRG00001015599	-	92	98.816	ENSPTIG00000020916	POLR3A	78	98.816	Panthera_tigris_altaica
ENSCGRG00001015599	-	92	98.718	ENSPTRG00000002664	POLR3A	78	98.718	Pan_troglodytes
ENSCGRG00001015599	-	92	98.718	ENSPANG00000022508	POLR3A	78	98.718	Papio_anubis
ENSCGRG00001015599	-	92	92.142	ENSPKIG00000008140	polr3a	77	94.444	Paramormyrops_kingsleyae
ENSCGRG00001015599	-	91	95.513	ENSPSIG00000002092	POLR3A	78	95.513	Pelodiscus_sinensis
ENSCGRG00001015599	-	52	81.494	ENSPMGG00000010601	polr3a	97	81.494	Periophthalmus_magnuspinnatus
ENSCGRG00001015599	-	92	99.359	ENSPEMG00000006768	Polr3a	78	99.359	Peromyscus_maniculatus_bairdii
ENSCGRG00001015599	-	92	97.309	ENSPCIG00000015842	POLR3A	78	97.309	Phascolarctos_cinereus
ENSCGRG00001015599	-	54	88.836	ENSPFOG00000021951	polr3a	100	88.836	Poecilia_formosa
ENSCGRG00001015599	-	54	88.836	ENSPFOG00000022090	POLR3A	99	88.836	Poecilia_formosa
ENSCGRG00001015599	-	92	90.312	ENSPLAG00000000997	polr3a	78	90.312	Poecilia_latipinna
ENSCGRG00001015599	-	54	88.836	ENSPLAG00000008311	-	96	88.836	Poecilia_latipinna
ENSCGRG00001015599	-	92	90.205	ENSPMEG00000006821	polr3a	78	90.205	Poecilia_mexicana
ENSCGRG00001015599	-	92	90.205	ENSPREG00000002385	polr3a	78	90.205	Poecilia_reticulata
ENSCGRG00001015599	-	84	98.718	ENSPPYG00000002305	POLR3A	76	98.718	Pongo_abelii
ENSCGRG00001015599	-	74	93.458	ENSPCAG00000005690	POLR3A	65	93.458	Procavia_capensis
ENSCGRG00001015599	-	92	98.384	ENSPCOG00000028311	POLR3A	78	98.384	Propithecus_coquereli
ENSCGRG00001015599	-	92	98.718	ENSPVAG00000015553	POLR3A	78	98.718	Pteropus_vampyrus
ENSCGRG00001015599	-	92	89.882	ENSPNYG00000020987	polr3a	78	89.882	Pundamilia_nyererei
ENSCGRG00001015599	-	92	90.385	ENSPNAG00000006629	polr3a	78	90.385	Pygocentrus_nattereri
ENSCGRG00001015599	-	92	99.359	ENSRNOG00000010008	Polr3a	78	99.359	Rattus_norvegicus
ENSCGRG00001015599	-	92	98.718	ENSRBIG00000034967	POLR3A	78	98.718	Rhinopithecus_bieti
ENSCGRG00001015599	-	92	98.718	ENSRROG00000025527	POLR3A	80	98.718	Rhinopithecus_roxellana
ENSCGRG00001015599	-	92	53.092	YOR116C	RPO31	76	53.092	Saccharomyces_cerevisiae
ENSCGRG00001015599	-	92	98.718	ENSSBOG00000022199	POLR3A	78	98.718	Saimiri_boliviensis_boliviensis
ENSCGRG00001015599	-	92	97.201	ENSSHAG00000007588	POLR3A	73	97.201	Sarcophilus_harrisii
ENSCGRG00001015599	-	92	92.465	ENSSFOG00015014357	polr3a	78	92.465	Scleropages_formosus
ENSCGRG00001015599	-	92	89.989	ENSSMAG00000001780	polr3a	78	89.989	Scophthalmus_maximus
ENSCGRG00001015599	-	92	90.635	ENSSDUG00000019840	polr3a	78	90.635	Seriola_dumerili
ENSCGRG00001015599	-	92	90.635	ENSSLDG00000023908	polr3a	78	90.635	Seriola_lalandi_dorsalis
ENSCGRG00001015599	-	52	98.119	ENSSARG00000009916	POLR3A	57	98.119	Sorex_araneus
ENSCGRG00001015599	-	92	96.340	ENSSPUG00000013209	POLR3A	80	96.340	Sphenodon_punctatus
ENSCGRG00001015599	-	92	91.026	ENSSPAG00000017712	polr3a	78	91.026	Stegastes_partitus
ENSCGRG00001015599	-	92	98.170	ENSSSCG00000010327	POLR3A	78	98.170	Sus_scrofa
ENSCGRG00001015599	-	92	96.125	ENSTGUG00000006423	-	78	96.125	Taeniopygia_guttata
ENSCGRG00001015599	-	92	90.385	ENSTRUG00000013488	polr3a	98	87.212	Takifugu_rubripes
ENSCGRG00001015599	-	92	91.026	ENSTNIG00000013151	polr3a	78	91.026	Tetraodon_nigroviridis
ENSCGRG00001015599	-	58	98.077	ENSTBEG00000015288	POLR3A	51	98.077	Tupaia_belangeri
ENSCGRG00001015599	-	88	100.000	ENSTTRG00000007817	POLR3A	77	100.000	Tursiops_truncatus
ENSCGRG00001015599	-	92	98.077	ENSUAMG00000011283	POLR3A	94	97.708	Ursus_americanus
ENSCGRG00001015599	-	92	98.601	ENSUMAG00000013913	POLR3A	78	98.601	Ursus_maritimus
ENSCGRG00001015599	-	83	98.033	ENSVPAG00000003285	POLR3A	71	98.033	Vicugna_pacos
ENSCGRG00001015599	-	92	98.601	ENSVVUG00000025523	POLR3A	78	98.601	Vulpes_vulpes
ENSCGRG00001015599	-	84	92.250	ENSXETG00000018101	polr3a	82	92.250	Xenopus_tropicalis
ENSCGRG00001015599	-	54	88.365	ENSXCOG00000006098	polr3a	98	88.365	Xiphophorus_couchianus
ENSCGRG00001015599	-	92	89.989	ENSXMAG00000015213	polr3a	82	89.825	Xiphophorus_maculatus