EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00001016005 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Plus strand
Length: 741 bases
Position: chrscaffold_35:10927312-10928052
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001015382	LSM	PF01423.22	2.5e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001019623	-	291	-	ENSCGRP00001015382	96 (aa)	-	-

Gene Model

Click here to download ENSCGRG00001016005's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001016005's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00001016005	-	74	32.394	ENSCGRG00001011831	-	83	32.394
ENSCGRG00001016005	-	74	30.986	ENSCGRG00001010645	-	83	30.986
ENSCGRG00001016005	-	92	88.889	ENSCGRG00001000807	-	87	88.889
ENSCGRG00001016005	-	74	30.986	ENSCGRG00001013878	-	81	30.986
ENSCGRG00001016005	-	71	30.882	ENSCGRG00001013591	-	87	30.882

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001016005	-	92	88.889	ENSG00000130332	LSM7	86	90.000	Homo_sapiens
ENSCGRG00001016005	-	92	84.444	ENSAPOG00000015573	lsm7	78	84.444	Acanthochromis_polyacanthus
ENSCGRG00001016005	-	92	87.778	ENSAMEG00000005484	LSM7	87	87.778	Ailuropoda_melanoleuca
ENSCGRG00001016005	-	92	83.333	ENSACIG00000006498	lsm7	71	83.333	Amphilophus_citrinellus
ENSCGRG00001016005	-	92	84.444	ENSAOCG00000001077	lsm7	82	84.444	Amphiprion_ocellaris
ENSCGRG00001016005	-	92	84.444	ENSAPEG00000024447	lsm7	82	84.444	Amphiprion_percula
ENSCGRG00001016005	-	92	84.444	ENSAPEG00000000694	lsm7	87	84.444	Amphiprion_percula
ENSCGRG00001016005	-	92	84.444	ENSATEG00000008557	lsm7	87	84.444	Anabas_testudineus
ENSCGRG00001016005	-	92	88.889	ENSANAG00000037196	-	87	88.889	Aotus_nancymaae
ENSCGRG00001016005	-	92	80.000	ENSANAG00000022222	-	86	80.000	Aotus_nancymaae
ENSCGRG00001016005	-	93	82.418	ENSACLG00000021021	lsm7	87	83.333	Astatotilapia_calliptera
ENSCGRG00001016005	-	92	84.444	ENSAMXG00000037622	lsm7	87	84.444	Astyanax_mexicanus
ENSCGRG00001016005	-	92	88.889	ENSBTAG00000004521	LSM7	87	88.889	Bos_taurus
ENSCGRG00001016005	-	88	52.381	WBGene00003081	lsm-7	81	52.381	Caenorhabditis_elegans
ENSCGRG00001016005	-	56	90.741	ENSCJAG00000039713	-	66	90.741	Callithrix_jacchus
ENSCGRG00001016005	-	92	87.778	ENSCAFG00000019409	LSM7	87	87.778	Canis_familiaris
ENSCGRG00001016005	-	92	87.778	ENSCAFG00020018168	LSM7	66	87.778	Canis_lupus_dingo
ENSCGRG00001016005	-	92	88.889	ENSCHIG00000023663	LSM7	87	88.889	Capra_hircus
ENSCGRG00001016005	-	60	88.333	ENSCAPG00000014534	LSM7	85	88.333	Cavia_aperea
ENSCGRG00001016005	-	92	88.889	ENSCPOG00000014025	LSM7	89	88.889	Cavia_porcellus
ENSCGRG00001016005	-	93	89.011	ENSCCAG00000035456	LSM7	89	89.011	Cebus_capucinus
ENSCGRG00001016005	-	92	88.889	ENSCATG00000023543	LSM7	87	88.889	Cercocebus_atys
ENSCGRG00001016005	-	92	88.889	ENSCLAG00000011635	LSM7	87	88.889	Chinchilla_lanigera
ENSCGRG00001016005	-	92	88.889	ENSCSAG00000011599	LSM7	87	88.889	Chlorocebus_sabaeus
ENSCGRG00001016005	-	61	85.246	ENSCPBG00000021317	LSM7	65	85.246	Chrysemys_picta_bellii
ENSCGRG00001016005	-	86	73.494	ENSCING00000022134	-	84	73.494	Ciona_intestinalis
ENSCGRG00001016005	-	92	88.889	ENSCANG00000035525	LSM7	87	88.889	Colobus_angolensis_palliatus
ENSCGRG00001016005	-	100	100.000	ENSCGRG00000006821	-	100	100.000	Cricetulus_griseus_crigri
ENSCGRG00001016005	-	93	87.912	ENSCGRG00000014355	-	87	88.889	Cricetulus_griseus_crigri
ENSCGRG00001016005	-	93	84.615	ENSCSEG00000014900	lsm7	77	84.615	Cynoglossus_semilaevis
ENSCGRG00001016005	-	92	85.556	ENSCVAG00000021091	lsm7	83	85.556	Cyprinodon_variegatus
ENSCGRG00001016005	-	92	84.444	ENSDARG00000058328	lsm7	87	84.444	Danio_rerio
ENSCGRG00001016005	-	93	87.912	ENSDORG00000024460	Lsm7	89	87.912	Dipodomys_ordii
ENSCGRG00001016005	-	88	69.412	FBgn0261068	LSm7	77	69.412	Drosophila_melanogaster
ENSCGRG00001016005	-	92	87.778	ENSETEG00000012788	LSM7	88	87.778	Echinops_telfairi
ENSCGRG00001016005	-	76	49.315	ENSEBUG00000010470	-	69	49.315	Eptatretus_burgeri
ENSCGRG00001016005	-	92	76.667	ENSEBUG00000016992	lsm7	87	76.667	Eptatretus_burgeri
ENSCGRG00001016005	-	92	88.889	ENSECAG00000001440	LSM7	58	88.889	Equus_caballus
ENSCGRG00001016005	-	92	87.778	ENSFCAG00000003445	LSM7	87	87.778	Felis_catus
ENSCGRG00001016005	-	92	86.667	ENSFALG00000011912	LSM7	89	86.667	Ficedula_albicollis
ENSCGRG00001016005	-	86	88.235	ENSFDAG00000007661	LSM7	89	88.235	Fukomys_damarensis
ENSCGRG00001016005	-	82	83.951	ENSFHEG00000006349	lsm7	80	85.556	Fundulus_heteroclitus
ENSCGRG00001016005	-	89	85.882	ENSGMOG00000013320	lsm7	83	85.882	Gadus_morhua
ENSCGRG00001016005	-	92	85.556	ENSGAFG00000013902	lsm7	87	85.556	Gambusia_affinis
ENSCGRG00001016005	-	92	84.444	ENSGACG00000010390	lsm7	87	84.444	Gasterosteus_aculeatus
ENSCGRG00001016005	-	92	88.889	ENSGGOG00000010172	LSM7	87	88.889	Gorilla_gorilla
ENSCGRG00001016005	-	92	83.333	ENSHBUG00000004616	lsm7	87	83.333	Haplochromis_burtoni
ENSCGRG00001016005	-	92	88.889	ENSHGLG00000010587	LSM7	87	88.889	Heterocephalus_glaber_female
ENSCGRG00001016005	-	92	88.889	ENSHGLG00100000852	LSM7	87	88.889	Heterocephalus_glaber_male
ENSCGRG00001016005	-	92	83.333	ENSHCOG00000020252	lsm7	89	83.333	Hippocampus_comes
ENSCGRG00001016005	-	92	85.556	ENSIPUG00000024724	lsm7	87	85.556	Ictalurus_punctatus
ENSCGRG00001016005	-	93	87.912	ENSSTOG00000028372	LSM7	89	87.912	Ictidomys_tridecemlineatus
ENSCGRG00001016005	-	92	88.889	ENSJJAG00000001936	Lsm7	87	88.889	Jaculus_jaculus
ENSCGRG00001016005	-	92	85.556	ENSKMAG00000022151	lsm7	87	85.556	Kryptolebias_marmoratus
ENSCGRG00001016005	-	92	84.444	ENSLBEG00000005203	lsm7	87	84.444	Labrus_bergylta
ENSCGRG00001016005	-	83	87.805	ENSLACG00000015700	LSM7	87	88.889	Latimeria_chalumnae
ENSCGRG00001016005	-	92	87.778	ENSLOCG00000004356	lsm7	87	87.778	Lepisosteus_oculatus
ENSCGRG00001016005	-	92	88.889	ENSLAFG00000029302	LSM7	87	88.889	Loxodonta_africana
ENSCGRG00001016005	-	92	88.889	ENSMFAG00000044572	LSM7	87	88.889	Macaca_fascicularis
ENSCGRG00001016005	-	93	87.912	ENSMMUG00000000452	LSM7	89	87.912	Macaca_mulatta
ENSCGRG00001016005	-	92	88.889	ENSMNEG00000004393	LSM7	87	88.889	Macaca_nemestrina
ENSCGRG00001016005	-	92	88.889	ENSMLEG00000030852	LSM7	89	88.889	Mandrillus_leucophaeus
ENSCGRG00001016005	-	92	83.333	ENSMAMG00000005410	lsm7	87	83.333	Mastacembelus_armatus
ENSCGRG00001016005	-	92	83.333	ENSMZEG00005028055	lsm7	87	83.333	Maylandia_zebra
ENSCGRG00001016005	-	92	87.778	ENSMGAG00000000750	LSM7	78	87.778	Meleagris_gallopavo
ENSCGRG00001016005	-	92	88.889	ENSMAUG00000009276	Lsm7	87	88.889	Mesocricetus_auratus
ENSCGRG00001016005	-	92	88.889	ENSMICG00000009988	-	87	88.889	Microcebus_murinus
ENSCGRG00001016005	-	92	88.889	ENSMICG00000028619	-	87	88.889	Microcebus_murinus
ENSCGRG00001016005	-	92	88.889	ENSMOCG00000016925	Lsm7	87	88.889	Microtus_ochrogaster
ENSCGRG00001016005	-	92	84.444	ENSMMOG00000019645	lsm7	86	84.444	Mola_mola
ENSCGRG00001016005	-	92	88.889	ENSMODG00000004722	LSM7	87	88.889	Monodelphis_domestica
ENSCGRG00001016005	-	92	83.333	ENSMALG00000014511	lsm7	69	83.333	Monopterus_albus
ENSCGRG00001016005	-	92	87.778	MGP_CAROLIEiJ_G0015607	Lsm7	87	87.778	Mus_caroli
ENSCGRG00001016005	-	92	87.778	ENSMUSG00000035215	Lsm7	87	87.778	Mus_musculus
ENSCGRG00001016005	-	92	87.778	MGP_PahariEiJ_G0031020	Lsm7	87	87.778	Mus_pahari
ENSCGRG00001016005	-	92	87.778	MGP_SPRETEiJ_G0016425	Lsm7	87	87.778	Mus_spretus
ENSCGRG00001016005	-	92	88.889	ENSMLUG00000013097	-	87	88.889	Myotis_lucifugus
ENSCGRG00001016005	-	93	80.220	ENSMLUG00000024002	-	84	80.220	Myotis_lucifugus
ENSCGRG00001016005	-	92	87.778	ENSNGAG00000021637	Lsm7	87	87.778	Nannospalax_galili
ENSCGRG00001016005	-	84	83.133	ENSNBRG00000001237	-	73	82.418	Neolamprologus_brichardi
ENSCGRG00001016005	-	92	83.333	ENSNBRG00000015770	lsm7	78	83.333	Neolamprologus_brichardi
ENSCGRG00001016005	-	92	88.889	ENSNLEG00000002265	LSM7	87	88.889	Nomascus_leucogenys
ENSCGRG00001016005	-	89	69.412	ENSODEG00000008190	-	81	69.412	Octodon_degus
ENSCGRG00001016005	-	92	88.889	ENSODEG00000013590	-	87	88.889	Octodon_degus
ENSCGRG00001016005	-	92	82.222	ENSODEG00000018769	-	87	82.222	Octodon_degus
ENSCGRG00001016005	-	92	83.333	ENSONIG00000001801	lsm7	78	83.333	Oreochromis_niloticus
ENSCGRG00001016005	-	92	84.444	ENSORLG00000023951	lsm7	87	84.444	Oryzias_latipes
ENSCGRG00001016005	-	92	84.444	ENSORLG00020022226	lsm7	87	84.444	Oryzias_latipes_hni
ENSCGRG00001016005	-	92	84.444	ENSORLG00015020044	lsm7	83	84.444	Oryzias_latipes_hsok
ENSCGRG00001016005	-	92	84.444	ENSOMEG00000012806	lsm7	87	84.444	Oryzias_melastigma
ENSCGRG00001016005	-	92	88.889	ENSOGAG00000000144	-	88	88.889	Otolemur_garnettii
ENSCGRG00001016005	-	93	79.121	ENSOGAG00000024373	-	89	79.121	Otolemur_garnettii
ENSCGRG00001016005	-	92	88.889	ENSOARG00000014013	LSM7	87	88.889	Ovis_aries
ENSCGRG00001016005	-	92	88.889	ENSPPAG00000026500	LSM7	87	88.889	Pan_paniscus
ENSCGRG00001016005	-	92	87.778	ENSPPRG00000008624	LSM7	87	87.778	Panthera_pardus
ENSCGRG00001016005	-	92	87.778	ENSPTIG00000016252	LSM7	87	87.778	Panthera_tigris_altaica
ENSCGRG00001016005	-	92	88.889	ENSPTRG00000010233	LSM7	87	88.889	Pan_troglodytes
ENSCGRG00001016005	-	92	88.889	ENSPANG00000020668	LSM7	87	88.889	Papio_anubis
ENSCGRG00001016005	-	92	86.667	ENSPKIG00000011325	lsm7	87	86.667	Paramormyrops_kingsleyae
ENSCGRG00001016005	-	92	87.778	ENSPSIG00000017149	LSM7	79	87.778	Pelodiscus_sinensis
ENSCGRG00001016005	-	92	84.444	ENSPMGG00000006498	lsm7	87	84.444	Periophthalmus_magnuspinnatus
ENSCGRG00001016005	-	93	89.011	ENSPCIG00000030454	LSM7	89	89.011	Phascolarctos_cinereus
ENSCGRG00001016005	-	92	85.556	ENSPFOG00000012467	lsm7	80	85.556	Poecilia_formosa
ENSCGRG00001016005	-	92	85.556	ENSPLAG00000000252	lsm7	83	85.556	Poecilia_latipinna
ENSCGRG00001016005	-	93	84.615	ENSPMEG00000000587	lsm7	83	85.556	Poecilia_mexicana
ENSCGRG00001016005	-	81	69.620	ENSPREG00000016718	lsm7	63	69.620	Poecilia_reticulata
ENSCGRG00001016005	-	93	89.011	ENSPCOG00000017177	LSM7	89	89.011	Propithecus_coquereli
ENSCGRG00001016005	-	92	83.333	ENSPNYG00000006938	lsm7	87	83.333	Pundamilia_nyererei
ENSCGRG00001016005	-	93	83.516	ENSPNAG00000010141	lsm7	89	83.516	Pygocentrus_nattereri
ENSCGRG00001016005	-	92	88.889	ENSRNOG00000019552	Lsm7	87	88.889	Rattus_norvegicus
ENSCGRG00001016005	-	92	88.889	ENSRBIG00000035978	LSM7	87	88.889	Rhinopithecus_bieti
ENSCGRG00001016005	-	92	88.889	ENSRROG00000034044	LSM7	87	88.889	Rhinopithecus_roxellana
ENSCGRG00001016005	-	84	47.619	YNL147W	-	73	47.619	Saccharomyces_cerevisiae
ENSCGRG00001016005	-	92	88.889	ENSSBOG00000034899	LSM7	87	88.889	Saimiri_boliviensis_boliviensis
ENSCGRG00001016005	-	89	88.235	ENSSFOG00015006728	lsm7	83	88.235	Scleropages_formosus
ENSCGRG00001016005	-	92	84.444	ENSSMAG00000004195	lsm7	83	84.444	Scophthalmus_maximus
ENSCGRG00001016005	-	92	84.444	ENSSDUG00000001863	lsm7	87	84.444	Seriola_dumerili
ENSCGRG00001016005	-	92	84.444	ENSSLDG00000016339	lsm7	87	84.444	Seriola_lalandi_dorsalis
ENSCGRG00001016005	-	92	84.444	ENSSPAG00000015221	lsm7	87	84.444	Stegastes_partitus
ENSCGRG00001016005	-	93	89.011	ENSSSCG00000013463	LSM7	89	89.011	Sus_scrofa
ENSCGRG00001016005	-	92	86.667	ENSTGUG00000000067	LSM7	89	86.667	Taeniopygia_guttata
ENSCGRG00001016005	-	92	84.444	ENSTRUG00000022913	lsm7	87	84.444	Takifugu_rubripes
ENSCGRG00001016005	-	92	84.444	ENSTNIG00000015525	lsm7	87	84.444	Tetraodon_nigroviridis
ENSCGRG00001016005	-	59	77.966	ENSTBEG00000016602	LSM7	84	77.966	Tupaia_belangeri
ENSCGRG00001016005	-	92	87.778	ENSUAMG00000000912	LSM7	75	87.778	Ursus_americanus
ENSCGRG00001016005	-	92	87.778	ENSUMAG00000006556	LSM7	70	87.778	Ursus_maritimus
ENSCGRG00001016005	-	60	86.667	ENSVVUG00000002640	LSM7	55	86.667	Vulpes_vulpes
ENSCGRG00001016005	-	92	86.667	ENSXETG00000022166	lsm7	89	86.667	Xenopus_tropicalis
ENSCGRG00001016005	-	92	85.556	ENSXCOG00000002572	lsm7	88	85.556	Xiphophorus_couchianus
ENSCGRG00001016005	-	92	85.556	ENSXMAG00000018630	lsm7	87	85.556	Xiphophorus_maculatus