EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00001016009 (Gene tree)
Gene ID: -
Gene Symbol: Zfr
Alias: C920030H05Rik
Full Name: zinc finger RNA binding protein
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Plus strand
Length: 59822 bases
Position: chrscaffold_0:108469952-108529773
Accession: 1341890
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001015397	DZF	PF07528.14	7.4e-70	1	1
ENSCGRP00001015397	zf-met	PF12874.7	2.4e-21	1	3
ENSCGRP00001015397	zf-met	PF12874.7	2.4e-21	2	3
ENSCGRP00001015397	zf-met	PF12874.7	2.4e-21	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001019638	-	5332	-	ENSCGRP00001015397	1074 (aa)	-	-

Gene Model

Click here to download ENSCGRG00001016009's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001016009's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00001016009	Zfr	70	46.429	ENSCGRG00001019870	Zfr2	80	44.459

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001016009	Zfr	100	98.417	ENSG00000056097	ZFR	99	100.000	Homo_sapiens
ENSCGRG00001016009	Zfr	100	72.458	ENSAPOG00000009740	zfr	100	72.719	Acanthochromis_polyacanthus
ENSCGRG00001016009	Zfr	100	98.417	ENSAMEG00000006184	ZFR	100	98.417	Ailuropoda_melanoleuca
ENSCGRG00001016009	Zfr	94	84.656	ENSACIG00000015926	zfr	100	75.117	Amphilophus_citrinellus
ENSCGRG00001016009	Zfr	100	73.929	ENSAOCG00000013876	zfr	100	74.749	Amphiprion_ocellaris
ENSCGRG00001016009	Zfr	100	76.846	ENSAPEG00000024383	zfr	100	77.393	Amphiprion_percula
ENSCGRG00001016009	Zfr	100	76.138	ENSATEG00000010271	zfr	100	77.615	Anabas_testudineus
ENSCGRG00001016009	Zfr	78	85.269	ENSAPLG00000015627	-	100	85.509	Anas_platyrhynchos
ENSCGRG00001016009	Zfr	100	88.137	ENSACAG00000007880	ZFR	100	88.126	Anolis_carolinensis
ENSCGRG00001016009	Zfr	100	98.603	ENSANAG00000023333	ZFR	100	98.603	Aotus_nancymaae
ENSCGRG00001016009	Zfr	94	84.656	ENSACLG00000016832	zfr	100	75.234	Astatotilapia_calliptera
ENSCGRG00001016009	Zfr	98	77.072	ENSAMXG00000019511	zfr	100	79.571	Astyanax_mexicanus
ENSCGRG00001016009	Zfr	100	98.231	ENSBTAG00000008414	ZFR	100	98.231	Bos_taurus
ENSCGRG00001016009	Zfr	100	98.696	ENSCJAG00000018740	ZFR	100	98.696	Callithrix_jacchus
ENSCGRG00001016009	Zfr	100	95.915	ENSCAFG00000018886	ZFR	100	98.473	Canis_familiaris
ENSCGRG00001016009	Zfr	100	98.417	ENSCAFG00020016859	-	100	98.417	Canis_lupus_dingo
ENSCGRG00001016009	Zfr	100	98.045	ENSCHIG00000007710	ZFR	100	98.045	Capra_hircus
ENSCGRG00001016009	Zfr	97	97.318	ENSTSYG00000010670	ZFR	99	97.318	Carlito_syrichta
ENSCGRG00001016009	Zfr	96	76.408	ENSCAPG00000015655	ZFR	100	74.660	Cavia_aperea
ENSCGRG00001016009	Zfr	96	92.121	ENSCPOG00000000862	ZFR	100	92.121	Cavia_porcellus
ENSCGRG00001016009	Zfr	100	98.510	ENSCCAG00000024473	ZFR	100	98.510	Cebus_capucinus
ENSCGRG00001016009	Zfr	100	98.510	ENSCATG00000038311	ZFR	100	98.510	Cercocebus_atys
ENSCGRG00001016009	Zfr	96	97.763	ENSCLAG00000007408	ZFR	100	97.763	Chinchilla_lanigera
ENSCGRG00001016009	Zfr	100	98.324	ENSCSAG00000017180	ZFR	100	98.324	Chlorocebus_sabaeus
ENSCGRG00001016009	Zfr	89	87.248	ENSCHOG00000003848	ZFR	100	78.021	Choloepus_hoffmanni
ENSCGRG00001016009	Zfr	100	91.187	ENSCPBG00000024211	ZFR	100	91.373	Chrysemys_picta_bellii
ENSCGRG00001016009	Zfr	100	98.324	ENSCANG00000017807	ZFR	100	98.324	Colobus_angolensis_palliatus
ENSCGRG00001016009	Zfr	98	97.915	ENSCGRG00000001228	Zfr	99	97.915	Cricetulus_griseus_crigri
ENSCGRG00001016009	Zfr	99	75.345	ENSCSEG00000011169	ZFR	99	75.805	Cynoglossus_semilaevis
ENSCGRG00001016009	Zfr	93	76.087	ENSCSEG00000009224	zfr	100	74.765	Cynoglossus_semilaevis
ENSCGRG00001016009	Zfr	98	75.000	ENSCVAG00000016494	zfr	100	73.377	Cyprinodon_variegatus
ENSCGRG00001016009	Zfr	100	77.993	ENSDARG00000027109	zfr	100	78.943	Danio_rerio
ENSCGRG00001016009	Zfr	100	97.491	ENSDNOG00000008852	ZFR	100	97.491	Dasypus_novemcinctus
ENSCGRG00001016009	Zfr	100	98.324	ENSDORG00000016643	Zfr	100	98.324	Dipodomys_ordii
ENSCGRG00001016009	Zfr	100	91.993	ENSETEG00000008937	ZFR	100	91.993	Echinops_telfairi
ENSCGRG00001016009	Zfr	53	58.537	ENSEBUG00000012503	-	99	57.443	Eptatretus_burgeri
ENSCGRG00001016009	Zfr	100	98.138	ENSEASG00005007104	ZFR	100	98.138	Equus_asinus_asinus
ENSCGRG00001016009	Zfr	82	98.182	ENSECAG00000012851	ZFR	99	98.182	Equus_caballus
ENSCGRG00001016009	Zfr	95	84.828	ENSEEUG00000014206	ZFR	94	84.828	Erinaceus_europaeus
ENSCGRG00001016009	Zfr	99	67.974	ENSELUG00000022743	zfr	99	68.830	Esox_lucius
ENSCGRG00001016009	Zfr	100	98.510	ENSFCAG00000000354	ZFR	100	98.510	Felis_catus
ENSCGRG00001016009	Zfr	100	89.758	ENSFALG00000002149	ZFR	100	89.944	Ficedula_albicollis
ENSCGRG00001016009	Zfr	99	97.267	ENSFDAG00000012993	ZFR	100	97.267	Fukomys_damarensis
ENSCGRG00001016009	Zfr	54	73.810	ENSFHEG00000012064	zfr	100	69.278	Fundulus_heteroclitus
ENSCGRG00001016009	Zfr	94	83.750	ENSGMOG00000003967	zfr	94	82.432	Gadus_morhua
ENSCGRG00001016009	Zfr	100	91.806	ENSGALG00000003235	-	100	91.993	Gallus_gallus
ENSCGRG00001016009	Zfr	100	90.317	ENSGALG00000034488	-	100	89.944	Gallus_gallus
ENSCGRG00001016009	Zfr	99	61.446	ENSGAFG00000016229	zfr	100	60.550	Gambusia_affinis
ENSCGRG00001016009	Zfr	99	74.179	ENSGACG00000005045	zfr	100	73.399	Gasterosteus_aculeatus
ENSCGRG00001016009	Zfr	95	90.784	ENSGAGG00000013544	ZFR	99	90.980	Gopherus_agassizii
ENSCGRG00001016009	Zfr	100	98.417	ENSGGOG00000016302	ZFR	100	98.417	Gorilla_gorilla
ENSCGRG00001016009	Zfr	100	97.579	ENSHGLG00000008088	ZFR	100	97.579	Heterocephalus_glaber_female
ENSCGRG00001016009	Zfr	96	97.471	ENSHGLG00100016776	ZFR	99	97.471	Heterocephalus_glaber_male
ENSCGRG00001016009	Zfr	100	75.410	ENSHCOG00000001548	zfr	100	75.663	Hippocampus_comes
ENSCGRG00001016009	Zfr	100	78.532	ENSIPUG00000008192	zfr	100	79.307	Ictalurus_punctatus
ENSCGRG00001016009	Zfr	100	97.393	ENSSTOG00000008742	ZFR	100	97.393	Ictidomys_tridecemlineatus
ENSCGRG00001016009	Zfr	99	92.628	ENSJJAG00000023064	Zfr	98	92.628	Jaculus_jaculus
ENSCGRG00001016009	Zfr	92	75.351	ENSKMAG00000009468	zfr	99	76.342	Kryptolebias_marmoratus
ENSCGRG00001016009	Zfr	100	76.562	ENSLBEG00000010783	zfr	100	76.287	Labrus_bergylta
ENSCGRG00001016009	Zfr	100	77.798	ENSLACG00000000831	ZFR	100	79.390	Latimeria_chalumnae
ENSCGRG00001016009	Zfr	100	79.174	ENSLOCG00000006727	zfr	100	80.251	Lepisosteus_oculatus
ENSCGRG00001016009	Zfr	98	97.529	ENSLAFG00000002308	ZFR	100	97.529	Loxodonta_africana
ENSCGRG00001016009	Zfr	100	97.579	ENSMFAG00000042691	ZFR	100	97.579	Macaca_fascicularis
ENSCGRG00001016009	Zfr	100	98.510	ENSMMUG00000001317	ZFR	100	98.510	Macaca_mulatta
ENSCGRG00001016009	Zfr	100	98.510	ENSMNEG00000029441	ZFR	100	98.510	Macaca_nemestrina
ENSCGRG00001016009	Zfr	100	95.167	ENSMLEG00000028503	ZFR	100	98.351	Mandrillus_leucophaeus
ENSCGRG00001016009	Zfr	100	76.562	ENSMAMG00000017351	zfr	100	76.895	Mastacembelus_armatus
ENSCGRG00001016009	Zfr	94	84.656	ENSMZEG00005021243	zfr	100	75.234	Maylandia_zebra
ENSCGRG00001016009	Zfr	96	77.638	ENSMGAG00000002841	ZFR	99	77.735	Meleagris_gallopavo
ENSCGRG00001016009	Zfr	100	98.883	ENSMAUG00000000976	Zfr	100	98.883	Mesocricetus_auratus
ENSCGRG00001016009	Zfr	100	98.324	ENSMICG00000001244	ZFR	100	98.324	Microcebus_murinus
ENSCGRG00001016009	Zfr	100	99.441	ENSMOCG00000018630	Zfr	100	99.441	Microtus_ochrogaster
ENSCGRG00001016009	Zfr	53	80.243	ENSMMOG00000012585	zfr	90	76.296	Mola_mola
ENSCGRG00001016009	Zfr	100	94.413	ENSMODG00000020412	ZFR	100	94.413	Monodelphis_domestica
ENSCGRG00001016009	Zfr	100	73.321	ENSMALG00000007123	zfr	94	84.932	Monopterus_albus
ENSCGRG00001016009	Zfr	100	98.883	MGP_CAROLIEiJ_G0019681	Zfr	100	98.883	Mus_caroli
ENSCGRG00001016009	Zfr	100	98.883	ENSMUSG00000022201	Zfr	100	100.000	Mus_musculus
ENSCGRG00001016009	Zfr	100	98.976	MGP_PahariEiJ_G0016057	Zfr	100	98.976	Mus_pahari
ENSCGRG00001016009	Zfr	100	98.696	MGP_SPRETEiJ_G0020574	Zfr	100	98.696	Mus_spretus
ENSCGRG00001016009	Zfr	73	97.840	ENSMPUG00000015193	-	99	97.840	Mustela_putorius_furo
ENSCGRG00001016009	Zfr	96	97.295	ENSMLUG00000011797	ZFR	100	97.295	Myotis_lucifugus
ENSCGRG00001016009	Zfr	100	98.510	ENSNGAG00000018328	Zfr	100	98.510	Nannospalax_galili
ENSCGRG00001016009	Zfr	94	84.656	ENSNBRG00000008378	zfr	100	68.624	Neolamprologus_brichardi
ENSCGRG00001016009	Zfr	100	94.884	ENSNLEG00000014098	ZFR	100	98.254	Nomascus_leucogenys
ENSCGRG00001016009	Zfr	96	87.743	ENSMEUG00000010225	ZFR	100	87.743	Notamacropus_eugenii
ENSCGRG00001016009	Zfr	83	98.800	ENSOPRG00000016756	ZFR	84	98.800	Ochotona_princeps
ENSCGRG00001016009	Zfr	96	97.471	ENSODEG00000001990	ZFR	100	97.471	Octodon_degus
ENSCGRG00001016009	Zfr	96	93.883	ENSOANG00000014434	ZFR	99	93.495	Ornithorhynchus_anatinus
ENSCGRG00001016009	Zfr	100	98.045	ENSOCUG00000016737	ZFR	100	98.045	Oryctolagus_cuniculus
ENSCGRG00001016009	Zfr	99	76.041	ENSORLG00000017243	zfr	99	75.763	Oryzias_latipes
ENSCGRG00001016009	Zfr	99	75.547	ENSORLG00020014823	zfr	99	75.666	Oryzias_latipes_hni
ENSCGRG00001016009	Zfr	99	75.547	ENSORLG00015005801	zfr	99	75.666	Oryzias_latipes_hsok
ENSCGRG00001016009	Zfr	99	77.574	ENSOMEG00000003336	zfr	99	77.022	Oryzias_melastigma
ENSCGRG00001016009	Zfr	100	95.907	ENSOGAG00000015117	ZFR	100	95.907	Otolemur_garnettii
ENSCGRG00001016009	Zfr	96	97.090	ENSOARG00000012233	ZFR	100	97.090	Ovis_aries
ENSCGRG00001016009	Zfr	96	98.254	ENSPPAG00000027447	ZFR	99	98.155	Pan_paniscus
ENSCGRG00001016009	Zfr	100	98.603	ENSPPRG00000008253	ZFR	100	98.603	Panthera_pardus
ENSCGRG00001016009	Zfr	100	95.345	ENSPTIG00000010038	ZFR	99	95.612	Panthera_tigris_altaica
ENSCGRG00001016009	Zfr	100	98.510	ENSPTRG00000016771	ZFR	100	98.510	Pan_troglodytes
ENSCGRG00001016009	Zfr	100	96.369	ENSPANG00000003729	ZFR	100	96.369	Papio_anubis
ENSCGRG00001016009	Zfr	100	77.706	ENSPKIG00000016781	ZFR	100	78.991	Paramormyrops_kingsleyae
ENSCGRG00001016009	Zfr	100	70.530	ENSPKIG00000007596	ZFR	100	69.577	Paramormyrops_kingsleyae
ENSCGRG00001016009	Zfr	52	93.694	ENSPSIG00000005779	ZFR	100	93.694	Pelodiscus_sinensis
ENSCGRG00001016009	Zfr	100	64.358	ENSPMGG00000015984	zfr	100	71.204	Periophthalmus_magnuspinnatus
ENSCGRG00001016009	Zfr	96	98.261	ENSPEMG00000014573	Zfr	98	98.261	Peromyscus_maniculatus_bairdii
ENSCGRG00001016009	Zfr	100	94.227	ENSPCIG00000020906	ZFR	100	94.227	Phascolarctos_cinereus
ENSCGRG00001016009	Zfr	99	75.755	ENSPFOG00000005931	zfr	100	75.525	Poecilia_formosa
ENSCGRG00001016009	Zfr	99	75.389	ENSPREG00000011947	zfr	100	75.824	Poecilia_reticulata
ENSCGRG00001016009	Zfr	96	97.963	ENSPPYG00000015378	ZFR	99	97.963	Pongo_abelii
ENSCGRG00001016009	Zfr	100	89.479	ENSPCAG00000007277	ZFR	100	89.479	Procavia_capensis
ENSCGRG00001016009	Zfr	95	98.235	ENSPCOG00000000045	ZFR	99	98.235	Propithecus_coquereli
ENSCGRG00001016009	Zfr	94	97.146	ENSPVAG00000004780	ZFR	94	97.146	Pteropus_vampyrus
ENSCGRG00001016009	Zfr	94	84.656	ENSPNYG00000006239	zfr	100	75.234	Pundamilia_nyererei
ENSCGRG00001016009	Zfr	100	79.560	ENSPNAG00000025151	zfr	100	81.044	Pygocentrus_nattereri
ENSCGRG00001016009	Zfr	100	98.976	ENSRNOG00000011627	Zfr	100	99.219	Rattus_norvegicus
ENSCGRG00001016009	Zfr	100	98.417	ENSRBIG00000041561	ZFR	100	98.417	Rhinopithecus_bieti
ENSCGRG00001016009	Zfr	100	98.417	ENSRROG00000044008	ZFR	100	98.417	Rhinopithecus_roxellana
ENSCGRG00001016009	Zfr	96	98.152	ENSSBOG00000024150	ZFR	99	98.152	Saimiri_boliviensis_boliviensis
ENSCGRG00001016009	Zfr	96	93.981	ENSSHAG00000015478	ZFR	100	93.981	Sarcophilus_harrisii
ENSCGRG00001016009	Zfr	100	73.352	ENSSFOG00015017300	ZFR	100	73.810	Scleropages_formosus
ENSCGRG00001016009	Zfr	100	75.497	ENSSMAG00000000320	zfr	100	76.867	Scophthalmus_maximus
ENSCGRG00001016009	Zfr	100	76.937	ENSSDUG00000013882	zfr	100	77.686	Seriola_dumerili
ENSCGRG00001016009	Zfr	76	75.269	ENSSLDG00000000762	zfr	100	70.799	Seriola_lalandi_dorsalis
ENSCGRG00001016009	Zfr	89	98.649	ENSSARG00000006571	ZFR	93	98.649	Sorex_araneus
ENSCGRG00001016009	Zfr	96	90.573	ENSSPUG00000016786	ZFR	100	90.379	Sphenodon_punctatus
ENSCGRG00001016009	Zfr	100	76.664	ENSSPAG00000019293	zfr	100	77.502	Stegastes_partitus
ENSCGRG00001016009	Zfr	100	98.231	ENSSSCG00000027681	ZFR	100	98.231	Sus_scrofa
ENSCGRG00001016009	Zfr	99	90.798	ENSTGUG00000001909	ZFR	100	91.174	Taeniopygia_guttata
ENSCGRG00001016009	Zfr	100	76.804	ENSTRUG00000016620	zfr	100	76.895	Takifugu_rubripes
ENSCGRG00001016009	Zfr	55	74.242	ENSTNIG00000018856	zfr	98	72.727	Tetraodon_nigroviridis
ENSCGRG00001016009	Zfr	100	77.840	ENSTBEG00000017687	ZFR	100	77.654	Tupaia_belangeri
ENSCGRG00001016009	Zfr	100	93.017	ENSTTRG00000017321	ZFR	100	93.017	Tursiops_truncatus
ENSCGRG00001016009	Zfr	78	98.088	ENSUAMG00000000172	-	99	98.088	Ursus_americanus
ENSCGRG00001016009	Zfr	78	98.088	ENSUMAG00000013805	-	99	98.088	Ursus_maritimus
ENSCGRG00001016009	Zfr	100	94.879	ENSVPAG00000011011	ZFR	100	94.879	Vicugna_pacos
ENSCGRG00001016009	Zfr	100	98.510	ENSVVUG00000022171	-	100	98.510	Vulpes_vulpes
ENSCGRG00001016009	Zfr	100	79.349	ENSXETG00000015598	zfr	100	79.461	Xenopus_tropicalis
ENSCGRG00001016009	Zfr	99	75.091	ENSXCOG00000009361	zfr	100	74.291	Xiphophorus_couchianus
ENSCGRG00001016009	Zfr	99	74.657	ENSXMAG00000013356	zfr	100	74.064	Xiphophorus_maculatus