EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00001016148 (Gene tree)
Gene ID: -
Gene Symbol: Ybx3
Alias: Csda|Dpba|MSY3|MSY4|Yb2|dbpA|oxyR
Full Name: Y box protein 3
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Plus strand
Length: 24015 bases
Position: chrscaffold_38:13812272-13836286
Accession: 2137670
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001015584	CSD	PF00313.22	2e-26	1	1
ENSCGRP00001015582	CSD	PF00313.22	3.7e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001019827	-	1086	-	ENSCGRP00001015584	361 (aa)	-	-
ENSCGRT00001019825	-	2066	-	ENSCGRP00001015582	292 (aa)	-	-

Gene Model

Click here to download ENSCGRG00001016148's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001016148's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00001016148	Ybx3	83	50.633	ENSCGRG00001002534	Ybx1	90	55.844

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001016148	Ybx3	100	84.409	ENSG00000060138	YBX3	91	97.619	Homo_sapiens
ENSCGRG00001016148	Ybx3	96	85.795	ENSAMEG00000009393	YBX3	89	91.346	Ailuropoda_melanoleuca
ENSCGRG00001016148	Ybx3	73	98.077	ENSAPLG00000003147	YBX3	76	98.077	Anas_platyrhynchos
ENSCGRG00001016148	Ybx3	86	87.461	ENSANAG00000024492	-	100	90.190	Aotus_nancymaae
ENSCGRG00001016148	Ybx3	100	64.452	ENSANAG00000033366	-	77	79.268	Aotus_nancymaae
ENSCGRG00001016148	Ybx3	100	83.947	ENSBTAG00000009663	YBX3	83	87.540	Bos_taurus
ENSCGRG00001016148	Ybx3	100	84.367	ENSCJAG00000021660	-	86	89.308	Callithrix_jacchus
ENSCGRG00001016148	Ybx3	96	65.845	ENSCJAG00000033824	-	88	83.544	Callithrix_jacchus
ENSCGRG00001016148	Ybx3	79	93.031	ENSCAFG00000013401	YBX3	100	93.088	Canis_familiaris
ENSCGRG00001016148	Ybx3	100	81.600	ENSCAFG00020006412	YBX3	84	88.608	Canis_lupus_dingo
ENSCGRG00001016148	Ybx3	100	83.947	ENSCHIG00000010863	YBX3	88	90.415	Capra_hircus
ENSCGRG00001016148	Ybx3	79	93.031	ENSTSYG00000004204	-	96	88.254	Carlito_syrichta
ENSCGRG00001016148	Ybx3	100	72.727	ENSTSYG00000035821	-	72	95.745	Carlito_syrichta
ENSCGRG00001016148	Ybx3	79	88.462	ENSCAPG00000015039	YBX3	93	88.462	Cavia_aperea
ENSCGRG00001016148	Ybx3	80	89.384	ENSCPOG00000011329	YBX3	90	89.754	Cavia_porcellus
ENSCGRG00001016148	Ybx3	100	84.140	ENSCCAG00000016469	YBX3	85	89.308	Cebus_capucinus
ENSCGRG00001016148	Ybx3	100	83.646	ENSCATG00000034411	YBX3	85	88.994	Cercocebus_atys
ENSCGRG00001016148	Ybx3	79	89.860	ENSCLAG00000016030	YBX3	94	89.860	Chinchilla_lanigera
ENSCGRG00001016148	Ybx3	100	83.914	ENSCSAG00000008744	YBX3	85	89.308	Chlorocebus_sabaeus
ENSCGRG00001016148	Ybx3	94	75.145	ENSCHOG00000011988	YBX3	56	95.745	Choloepus_hoffmanni
ENSCGRG00001016148	Ybx3	80	79.725	ENSCPBG00000014147	YBX3	78	86.957	Chrysemys_picta_bellii
ENSCGRG00001016148	Ybx3	57	56.818	ENSCING00000010654	yb1/2/3	73	50.679	Ciona_intestinalis
ENSCGRG00001016148	Ybx3	81	90.847	ENSCANG00000036801	YBX3	100	89.524	Colobus_angolensis_palliatus
ENSCGRG00001016148	Ybx3	79	98.270	ENSCGRG00000004563	Ybx3	98	98.270	Cricetulus_griseus_crigri
ENSCGRG00001016148	Ybx3	86	85.350	ENSDORG00000009103	Ybx3	89	85.714	Dipodomys_ordii
ENSCGRG00001016148	Ybx3	78	84.266	ENSETEG00000002557	YBX3	99	82.746	Echinops_telfairi
ENSCGRG00001016148	Ybx3	100	81.301	ENSEASG00005014726	YBX3	100	84.553	Equus_asinus_asinus
ENSCGRG00001016148	Ybx3	100	84.282	ENSECAG00000013777	YBX3	100	87.534	Equus_caballus
ENSCGRG00001016148	Ybx3	78	90.493	ENSEEUG00000010415	YBX3	100	91.901	Erinaceus_europaeus
ENSCGRG00001016148	Ybx3	100	84.718	ENSFCAG00000027748	YBX3	85	91.483	Felis_catus
ENSCGRG00001016148	Ybx3	73	94.444	ENSFALG00000003661	YBX3	71	98.837	Ficedula_albicollis
ENSCGRG00001016148	Ybx3	79	86.014	ENSFDAG00000021192	YBX3	92	86.014	Fukomys_damarensis
ENSCGRG00001016148	Ybx3	91	72.593	ENSGALG00000031890	YBX3	78	86.087	Gallus_gallus
ENSCGRG00001016148	Ybx3	91	73.507	ENSGAGG00000017780	YBX3	78	88.596	Gopherus_agassizii
ENSCGRG00001016148	Ybx3	100	84.182	ENSGGOG00000001352	YBX3	85	89.623	Gorilla_gorilla
ENSCGRG00001016148	Ybx3	83	77.961	ENSHGLG00000014798	-	90	80.328	Heterocephalus_glaber_female
ENSCGRG00001016148	Ybx3	75	80.147	ENSHGLG00000015495	-	87	78.912	Heterocephalus_glaber_female
ENSCGRG00001016148	Ybx3	74	92.202	ENSHGLG00100003589	YBX3	87	92.202	Heterocephalus_glaber_male
ENSCGRG00001016148	Ybx3	93	84.706	ENSSTOG00000032577	-	87	86.218	Ictidomys_tridecemlineatus
ENSCGRG00001016148	Ybx3	79	87.324	ENSSTOG00000002108	-	88	87.324	Ictidomys_tridecemlineatus
ENSCGRG00001016148	Ybx3	81	70.748	ENSJJAG00000014239	Ybx3	100	84.375	Jaculus_jaculus
ENSCGRG00001016148	Ybx3	100	87.534	ENSLAFG00000017247	YBX3	94	87.025	Loxodonta_africana
ENSCGRG00001016148	Ybx3	100	84.140	ENSMFAG00000039369	YBX3	85	89.308	Macaca_fascicularis
ENSCGRG00001016148	Ybx3	88	86.462	ENSMMUG00000022469	YBX3	98	89.308	Macaca_mulatta
ENSCGRG00001016148	Ybx3	100	83.871	ENSMNEG00000045109	YBX3	85	89.308	Macaca_nemestrina
ENSCGRG00001016148	Ybx3	93	82.006	ENSMLEG00000033618	YBX3	81	91.608	Mandrillus_leucophaeus
ENSCGRG00001016148	Ybx3	72	98.095	ENSMGAG00000014224	YBX3	93	100.000	Meleagris_gallopavo
ENSCGRG00001016148	Ybx3	88	99.373	ENSMAUG00000012185	Ybx3	100	99.373	Mesocricetus_auratus
ENSCGRG00001016148	Ybx3	100	74.150	ENSMICG00000031459	-	85	76.543	Microcebus_murinus
ENSCGRG00001016148	Ybx3	100	85.946	ENSMICG00000038002	-	85	92.722	Microcebus_murinus
ENSCGRG00001016148	Ybx3	86	97.735	ENSMOCG00000016291	Ybx3	100	99.574	Microtus_ochrogaster
ENSCGRG00001016148	Ybx3	78	84.615	ENSMODG00000018248	YBX3	91	84.321	Monodelphis_domestica
ENSCGRG00001016148	Ybx3	100	97.945	MGP_CAROLIEiJ_G0028947	Ybx3	100	97.945	Mus_caroli
ENSCGRG00001016148	Ybx3	100	97.784	ENSMUSG00000030189	Ybx3	100	97.784	Mus_musculus
ENSCGRG00001016148	Ybx3	100	98.338	MGP_PahariEiJ_G0022709	Ybx3	100	98.338	Mus_pahari
ENSCGRG00001016148	Ybx3	100	98.061	MGP_SPRETEiJ_G0029994	Ybx3	100	98.061	Mus_spretus
ENSCGRG00001016148	Ybx3	100	70.000	ENSMPUG00000011810	YBX3	85	75.385	Mustela_putorius_furo
ENSCGRG00001016148	Ybx3	73	90.706	ENSMLUG00000007476	YBX3	100	90.706	Myotis_lucifugus
ENSCGRG00001016148	Ybx3	81	89.456	ENSNGAG00000000710	Ybx3	100	86.585	Nannospalax_galili
ENSCGRG00001016148	Ybx3	87	84.424	ENSNLEG00000034844	YBX3	90	85.849	Nomascus_leucogenys
ENSCGRG00001016148	Ybx3	87	81.818	ENSODEG00000017957	YBX3	93	83.861	Octodon_degus
ENSCGRG00001016148	Ybx3	81	88.435	ENSOCUG00000001889	YBX3	88	88.079	Oryctolagus_cuniculus
ENSCGRG00001016148	Ybx3	100	85.411	ENSOGAG00000013245	YBX3	86	89.783	Otolemur_garnettii
ENSCGRG00001016148	Ybx3	71	98.969	ENSOARG00000020919	YBX3	99	81.605	Ovis_aries
ENSCGRG00001016148	Ybx3	80	91.126	ENSPPAG00000039068	YBX3	82	92.568	Pan_paniscus
ENSCGRG00001016148	Ybx3	100	84.987	ENSPPRG00000005859	YBX3	85	91.798	Panthera_pardus
ENSCGRG00001016148	Ybx3	78	93.662	ENSPTIG00000005322	YBX3	81	93.357	Panthera_tigris_altaica
ENSCGRG00001016148	Ybx3	100	83.957	ENSPTRG00000004681	YBX3	85	89.623	Pan_troglodytes
ENSCGRG00001016148	Ybx3	100	83.871	ENSPANG00000010280	YBX3	85	88.994	Papio_anubis
ENSCGRG00001016148	Ybx3	73	84.186	ENSPSIG00000009247	YBX3	100	84.186	Pelodiscus_sinensis
ENSCGRG00001016148	Ybx3	88	99.051	ENSPEMG00000012132	-	100	99.051	Peromyscus_maniculatus_bairdii
ENSCGRG00001016148	Ybx3	83	98.340	ENSPEMG00000010391	-	92	98.340	Peromyscus_maniculatus_bairdii
ENSCGRG00001016148	Ybx3	71	81.853	ENSPCIG00000029949	YBX3	100	81.853	Phascolarctos_cinereus
ENSCGRG00001016148	Ybx3	100	84.367	ENSPPYG00000004279	YBX3	100	85.714	Pongo_abelii
ENSCGRG00001016148	Ybx3	78	85.764	ENSPCAG00000001397	YBX3	100	87.847	Procavia_capensis
ENSCGRG00001016148	Ybx3	51	92.350	ENSPCOG00000011663	YBX3	80	88.780	Propithecus_coquereli
ENSCGRG00001016148	Ybx3	82	79.000	ENSPVAG00000006740	YBX3	85	78.549	Pteropus_vampyrus
ENSCGRG00001016148	Ybx3	100	98.615	ENSRNOG00000005480	Ybx3	100	98.615	Rattus_norvegicus
ENSCGRG00001016148	Ybx3	100	83.827	ENSRBIG00000039208	YBX3	100	84.906	Rhinopithecus_bieti
ENSCGRG00001016148	Ybx3	100	84.097	ENSRROG00000029638	YBX3	100	85.445	Rhinopithecus_roxellana
ENSCGRG00001016148	Ybx3	100	77.898	ENSSBOG00000030573	YBX3	87	89.527	Saimiri_boliviensis_boliviensis
ENSCGRG00001016148	Ybx3	66	98.837	ENSSHAG00000003262	YBX3	98	82.818	Sarcophilus_harrisii
ENSCGRG00001016148	Ybx3	91	85.673	ENSSSCG00000000633	YBX3	84	90.938	Sus_scrofa
ENSCGRG00001016148	Ybx3	72	97.143	ENSTGUG00000012047	YBX3	75	97.143	Taeniopygia_guttata
ENSCGRG00001016148	Ybx3	100	80.654	ENSTBEG00000012570	YBX3	81	92.833	Tupaia_belangeri
ENSCGRG00001016148	Ybx3	72	82.707	ENSTTRG00000008045	YBX3	100	83.835	Tursiops_truncatus
ENSCGRG00001016148	Ybx3	76	90.253	ENSUAMG00000016662	YBX3	100	90.253	Ursus_americanus
ENSCGRG00001016148	Ybx3	78	93.662	ENSUMAG00000016118	YBX3	94	93.357	Ursus_maritimus
ENSCGRG00001016148	Ybx3	59	100.000	ENSVPAG00000000876	YBX3	100	70.775	Vicugna_pacos
ENSCGRG00001016148	Ybx3	76	89.170	ENSVVUG00000004956	YBX3	100	89.531	Vulpes_vulpes
ENSCGRG00001016148	Ybx3	74	72.727	ENSXETG00000016239	ybx3	86	83.810	Xenopus_tropicalis