EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00001016150 (Gene tree)
Gene ID: -
Gene Symbol: Chd9
Alias: 1810014J18Rik|9030205D12Rik|A330063D19Rik|AD013
Full Name: chromodomain helicase DNA binding protein 9
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Plus strand
Length: 135569 bases
Position: chrscaffold_20:5723456-5859024
Accession: 100769940
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001015648	ResIII	PF04851.15	1.6e-06	1	1
ENSCGRP00001015626	ResIII	PF04851.15	1.7e-06	1	1
ENSCGRP00001015626	BRK	PF07533.16	1.8e-30	1	2
ENSCGRP00001015626	BRK	PF07533.16	1.8e-30	2	2
ENSCGRP00001015648	BRK	PF07533.16	3.5e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001019869	-	11313	XM_007620997	ENSCGRP00001015626	2880 (aa)	XP_007619187	UPI000454402F
ENSCGRT00001019891	-	8571	-	ENSCGRP00001015648	2856 (aa)	-	-

Gene Model

Click here to download ENSCGRG00001016150's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001016150's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00001016150	Chd9	91	57.730	ENSCGRG00001011949	Chd7	94	54.860
ENSCGRG00001016150	Chd9	73	58.128	ENSCGRG00001014351	Chd8	74	68.333
ENSCGRG00001016150	Chd9	72	62.863	ENSCGRG00001002694	Chd6	78	62.863

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001016150	Chd9	99	91.939	ENSG00000177200	CHD9	100	98.113	Homo_sapiens
ENSCGRG00001016150	Chd9	84	70.471	ENSAPOG00000023034	chd9	98	68.508	Acanthochromis_polyacanthus
ENSCGRG00001016150	Chd9	99	91.635	ENSAMEG00000016232	CHD9	99	92.294	Ailuropoda_melanoleuca
ENSCGRG00001016150	Chd9	79	68.948	ENSACIG00000004097	chd9	73	61.549	Amphilophus_citrinellus
ENSCGRG00001016150	Chd9	84	70.017	ENSAOCG00000005487	chd9	99	68.427	Amphiprion_ocellaris
ENSCGRG00001016150	Chd9	84	70.101	ENSAPEG00000009859	chd9	98	68.345	Amphiprion_percula
ENSCGRG00001016150	Chd9	99	82.030	ENSAPLG00000002826	CHD9	74	83.904	Anas_platyrhynchos
ENSCGRG00001016150	Chd9	74	81.886	ENSACAG00000016150	CHD9	98	79.494	Anolis_carolinensis
ENSCGRG00001016150	Chd9	99	92.081	ENSANAG00000015630	CHD9	98	95.971	Aotus_nancymaae
ENSCGRG00001016150	Chd9	94	61.549	ENSAMXG00000005652	chd9	99	68.265	Astyanax_mexicanus
ENSCGRG00001016150	Chd9	99	91.007	ENSBTAG00000002287	CHD9	99	91.528	Bos_taurus
ENSCGRG00001016150	Chd9	99	91.354	ENSCJAG00000001573	CHD9	98	96.337	Callithrix_jacchus
ENSCGRG00001016150	Chd9	99	91.875	ENSCAFG00000009699	CHD9	99	92.465	Canis_familiaris
ENSCGRG00001016150	Chd9	99	91.875	ENSCAFG00020002879	CHD9	98	96.337	Canis_lupus_dingo
ENSCGRG00001016150	Chd9	99	91.733	ENSTSYG00000007693	CHD9	98	95.971	Carlito_syrichta
ENSCGRG00001016150	Chd9	81	76.510	ENSCAPG00000011604	CHD9	81	77.265	Cavia_aperea
ENSCGRG00001016150	Chd9	99	88.498	ENSCPOG00000036544	CHD9	99	89.055	Cavia_porcellus
ENSCGRG00001016150	Chd9	99	91.316	ENSCCAG00000036178	CHD9	98	95.604	Cebus_capucinus
ENSCGRG00001016150	Chd9	99	91.114	ENSCATG00000036753	CHD9	98	96.337	Cercocebus_atys
ENSCGRG00001016150	Chd9	99	91.701	ENSCLAG00000007137	CHD9	99	95.954	Chinchilla_lanigera
ENSCGRG00001016150	Chd9	99	91.672	ENSCSAG00000005311	CHD9	99	92.158	Chlorocebus_sabaeus
ENSCGRG00001016150	Chd9	74	96.154	ENSCHOG00000003935	CHD9	76	96.154	Choloepus_hoffmanni
ENSCGRG00001016150	Chd9	92	90.968	ENSCPBG00000012459	CHD9	99	90.968	Chrysemys_picta_bellii
ENSCGRG00001016150	Chd9	99	91.704	ENSCANG00000030349	CHD9	98	96.337	Colobus_angolensis_palliatus
ENSCGRG00001016150	Chd9	100	100.000	ENSCGRG00000012850	Chd9	100	100.000	Cricetulus_griseus_crigri
ENSCGRG00001016150	Chd9	84	68.188	ENSCSEG00000009209	chd9	96	67.131	Cynoglossus_semilaevis
ENSCGRG00001016150	Chd9	85	69.450	ENSCVAG00000016195	chd9	99	60.570	Cyprinodon_variegatus
ENSCGRG00001016150	Chd9	56	74.523	ENSDARG00000074498	chd9	66	74.923	Danio_rerio
ENSCGRG00001016150	Chd9	80	91.202	ENSDNOG00000006045	CHD9	99	92.232	Dasypus_novemcinctus
ENSCGRG00001016150	Chd9	69	90.421	ENSDORG00000008523	-	99	91.274	Dipodomys_ordii
ENSCGRG00001016150	Chd9	93	96.842	ENSETEG00000009565	CHD9	93	96.842	Echinops_telfairi
ENSCGRG00001016150	Chd9	99	91.395	ENSEASG00005014832	CHD9	99	94.319	Equus_asinus_asinus
ENSCGRG00001016150	Chd9	99	91.259	ENSECAG00000011505	CHD9	99	91.947	Equus_caballus
ENSCGRG00001016150	Chd9	83	97.238	ENSEEUG00000014515	CHD9	87	97.238	Erinaceus_europaeus
ENSCGRG00001016150	Chd9	75	74.870	ENSELUG00000006031	chd9	91	74.293	Esox_lucius
ENSCGRG00001016150	Chd9	99	91.351	ENSFCAG00000022534	CHD9	98	95.971	Felis_catus
ENSCGRG00001016150	Chd9	83	85.661	ENSFALG00000013276	CHD9	99	85.994	Ficedula_albicollis
ENSCGRG00001016150	Chd9	99	91.594	ENSFDAG00000021037	CHD9	99	92.110	Fukomys_damarensis
ENSCGRG00001016150	Chd9	84	69.852	ENSFHEG00000006068	chd9	94	70.885	Fundulus_heteroclitus
ENSCGRG00001016150	Chd9	67	76.323	ENSGMOG00000006040	chd9	83	76.391	Gadus_morhua
ENSCGRG00001016150	Chd9	96	83.207	ENSGALG00000039178	CHD9	99	83.138	Gallus_gallus
ENSCGRG00001016150	Chd9	84	69.839	ENSGAFG00000010014	chd9	98	67.765	Gambusia_affinis
ENSCGRG00001016150	Chd9	81	66.639	ENSGACG00000016694	chd9	68	74.480	Gasterosteus_aculeatus
ENSCGRG00001016150	Chd9	99	91.632	ENSGGOG00000014816	CHD9	98	96.703	Gorilla_gorilla
ENSCGRG00001016150	Chd9	79	69.924	ENSHBUG00000023322	chd9	96	69.580	Haplochromis_burtoni
ENSCGRG00001016150	Chd9	99	91.873	ENSHGLG00000014938	CHD9	99	96.069	Heterocephalus_glaber_female
ENSCGRG00001016150	Chd9	97	60.227	ENSHCOG00000000937	chd9	95	69.015	Hippocampus_comes
ENSCGRG00001016150	Chd9	81	69.815	ENSIPUG00000016448	chd9	97	72.628	Ictalurus_punctatus
ENSCGRG00001016150	Chd9	99	91.412	ENSSTOG00000022273	CHD9	99	96.301	Ictidomys_tridecemlineatus
ENSCGRG00001016150	Chd9	69	91.307	ENSJJAG00000015741	-	99	92.161	Jaculus_jaculus
ENSCGRG00001016150	Chd9	85	70.227	ENSKMAG00000016784	chd9	95	69.558	Kryptolebias_marmoratus
ENSCGRG00001016150	Chd9	79	69.697	ENSLBEG00000012077	chd9	95	68.778	Labrus_bergylta
ENSCGRG00001016150	Chd9	99	70.948	ENSLACG00000005557	CHD9	73	71.442	Latimeria_chalumnae
ENSCGRG00001016150	Chd9	87	72.739	ENSLOCG00000007225	chd9	68	78.969	Lepisosteus_oculatus
ENSCGRG00001016150	Chd9	99	90.594	ENSLAFG00000015374	CHD9	99	91.253	Loxodonta_africana
ENSCGRG00001016150	Chd9	99	91.635	ENSMFAG00000041354	CHD9	98	96.337	Macaca_fascicularis
ENSCGRG00001016150	Chd9	99	91.635	ENSMMUG00000016310	CHD9	98	96.337	Macaca_mulatta
ENSCGRG00001016150	Chd9	99	91.568	ENSMNEG00000031494	CHD9	100	92.772	Macaca_nemestrina
ENSCGRG00001016150	Chd9	99	91.670	ENSMLEG00000043219	CHD9	98	96.337	Mandrillus_leucophaeus
ENSCGRG00001016150	Chd9	85	69.850	ENSMAMG00000003909	chd9	99	60.575	Mastacembelus_armatus
ENSCGRG00001016150	Chd9	79	70.405	ENSMZEG00005006581	chd9	97	68.536	Maylandia_zebra
ENSCGRG00001016150	Chd9	95	77.291	ENSMGAG00000004642	CHD9	72	79.167	Meleagris_gallopavo
ENSCGRG00001016150	Chd9	99	91.557	ENSMICG00000016679	CHD9	98	95.238	Microcebus_murinus
ENSCGRG00001016150	Chd9	73	81.223	ENSMODG00000013142	-	99	91.147	Monodelphis_domestica
ENSCGRG00001016150	Chd9	84	69.501	ENSMALG00000013306	chd9	97	61.409	Monopterus_albus
ENSCGRG00001016150	Chd9	99	93.136	MGP_CAROLIEiJ_G0031364	Chd9	99	93.693	Mus_caroli
ENSCGRG00001016150	Chd9	100	93.109	ENSMUSG00000056608	Chd9	99	96.994	Mus_musculus
ENSCGRG00001016150	Chd9	100	91.220	MGP_PahariEiJ_G0022964	Chd9	100	91.877	Mus_pahari
ENSCGRG00001016150	Chd9	99	93.094	MGP_SPRETEiJ_G0032483	Chd9	99	93.547	Mus_spretus
ENSCGRG00001016150	Chd9	99	91.351	ENSMPUG00000003285	CHD9	99	92.185	Mustela_putorius_furo
ENSCGRG00001016150	Chd9	99	90.236	ENSMLUG00000004456	CHD9	99	90.757	Myotis_lucifugus
ENSCGRG00001016150	Chd9	84	70.113	ENSNBRG00000009423	chd9	97	68.200	Neolamprologus_brichardi
ENSCGRG00001016150	Chd9	90	92.334	ENSNLEG00000001026	CHD9	100	92.986	Nomascus_leucogenys
ENSCGRG00001016150	Chd9	76	95.425	ENSMEUG00000008222	-	84	95.425	Notamacropus_eugenii
ENSCGRG00001016150	Chd9	85	96.286	ENSOPRG00000011168	CHD9	85	96.286	Ochotona_princeps
ENSCGRG00001016150	Chd9	99	91.212	ENSODEG00000004466	CHD9	99	91.768	Octodon_degus
ENSCGRG00001016150	Chd9	79	71.526	ENSONIG00000002816	chd9	99	69.668	Oreochromis_niloticus
ENSCGRG00001016150	Chd9	99	84.362	ENSOANG00000013401	CHD9	99	84.535	Ornithorhynchus_anatinus
ENSCGRG00001016150	Chd9	83	93.275	ENSOCUG00000001016	CHD9	98	93.860	Oryctolagus_cuniculus
ENSCGRG00001016150	Chd9	84	70.168	ENSORLG00000013810	chd9	97	61.066	Oryzias_latipes
ENSCGRG00001016150	Chd9	84	70.555	ENSORLG00020020665	chd9	96	61.898	Oryzias_latipes_hni
ENSCGRG00001016150	Chd9	84	69.971	ENSORLG00015019126	chd9	94	69.043	Oryzias_latipes_hsok
ENSCGRG00001016150	Chd9	51	77.424	ENSOMEG00000015978	chd9	99	62.187	Oryzias_melastigma
ENSCGRG00001016150	Chd9	99	91.872	ENSOGAG00000002110	CHD9	99	92.358	Otolemur_garnettii
ENSCGRG00001016150	Chd9	99	90.635	ENSOARG00000017664	CHD9	99	91.294	Ovis_aries
ENSCGRG00001016150	Chd9	82	91.625	ENSPPAG00000039388	-	99	92.462	Pan_paniscus
ENSCGRG00001016150	Chd9	99	91.316	ENSPPRG00000004801	CHD9	98	95.604	Panthera_pardus
ENSCGRG00001016150	Chd9	99	90.344	ENSPTIG00000021854	CHD9	99	91.108	Panthera_tigris_altaica
ENSCGRG00001016150	Chd9	99	91.837	ENSPTRG00000008113	CHD9	98	96.703	Pan_troglodytes
ENSCGRG00001016150	Chd9	99	91.704	ENSPANG00000019307	CHD9	98	96.337	Papio_anubis
ENSCGRG00001016150	Chd9	97	62.548	ENSPKIG00000021876	chd9	98	69.935	Paramormyrops_kingsleyae
ENSCGRG00001016150	Chd9	89	67.508	ENSPKIG00000025401	-	71	62.318	Paramormyrops_kingsleyae
ENSCGRG00001016150	Chd9	65	82.541	ENSPSIG00000008099	CHD9	99	82.541	Pelodiscus_sinensis
ENSCGRG00001016150	Chd9	59	56.757	ENSPMAG00000006035	-	72	67.742	Petromyzon_marinus
ENSCGRG00001016150	Chd9	90	86.171	ENSPCIG00000017215	CHD9	99	88.343	Phascolarctos_cinereus
ENSCGRG00001016150	Chd9	79	69.755	ENSPFOG00000015839	chd9	99	59.620	Poecilia_formosa
ENSCGRG00001016150	Chd9	79	70.863	ENSPLAG00000011118	chd9	98	68.616	Poecilia_latipinna
ENSCGRG00001016150	Chd9	79	70.543	ENSPMEG00000015106	chd9	99	60.366	Poecilia_mexicana
ENSCGRG00001016150	Chd9	79	70.740	ENSPREG00000006473	chd9	98	67.900	Poecilia_reticulata
ENSCGRG00001016150	Chd9	99	91.768	ENSPPYG00000007348	CHD9	99	92.463	Pongo_abelii
ENSCGRG00001016150	Chd9	73	94.485	ENSPCAG00000007564	CHD9	86	94.485	Procavia_capensis
ENSCGRG00001016150	Chd9	99	90.757	ENSPCOG00000028433	CHD9	98	96.337	Propithecus_coquereli
ENSCGRG00001016150	Chd9	97	87.959	ENSPVAG00000015617	CHD9	97	88.739	Pteropus_vampyrus
ENSCGRG00001016150	Chd9	93	69.444	ENSPNYG00000010947	chd9	97	68.483	Pundamilia_nyererei
ENSCGRG00001016150	Chd9	90	66.304	ENSPNAG00000024141	chd9	99	68.913	Pygocentrus_nattereri
ENSCGRG00001016150	Chd9	90	90.050	ENSRNOG00000049302	Chd9	100	92.821	Rattus_norvegicus
ENSCGRG00001016150	Chd9	82	92.818	ENSRBIG00000035553	CHD9	98	96.337	Rhinopithecus_bieti
ENSCGRG00001016150	Chd9	82	92.794	ENSRROG00000033278	CHD9	98	96.337	Rhinopithecus_roxellana
ENSCGRG00001016150	Chd9	99	91.939	ENSSBOG00000030240	CHD9	98	95.971	Saimiri_boliviensis_boliviensis
ENSCGRG00001016150	Chd9	99	85.244	ENSSHAG00000002719	CHD9	99	85.546	Sarcophilus_harrisii
ENSCGRG00001016150	Chd9	81	69.160	ENSSFOG00015001327	chd9	67	76.044	Scleropages_formosus
ENSCGRG00001016150	Chd9	97	63.611	ENSSFOG00015020209	chd9	99	69.803	Scleropages_formosus
ENSCGRG00001016150	Chd9	79	68.999	ENSSMAG00000008953	chd9	98	67.324	Scophthalmus_maximus
ENSCGRG00001016150	Chd9	84	70.021	ENSSDUG00000006139	chd9	98	67.646	Seriola_dumerili
ENSCGRG00001016150	Chd9	84	70.366	ENSSLDG00000017818	chd9	98	68.074	Seriola_lalandi_dorsalis
ENSCGRG00001016150	Chd9	72	95.890	ENSSARG00000010632	CHD9	71	96.062	Sorex_araneus
ENSCGRG00001016150	Chd9	84	69.769	ENSSPAG00000021649	chd9	98	68.237	Stegastes_partitus
ENSCGRG00001016150	Chd9	99	90.014	ENSSSCG00000033591	CHD9	75	92.743	Sus_scrofa
ENSCGRG00001016150	Chd9	90	83.059	ENSTGUG00000007476	CHD9	100	83.136	Taeniopygia_guttata
ENSCGRG00001016150	Chd9	56	75.536	ENSTRUG00000009125	chd9	99	60.694	Takifugu_rubripes
ENSCGRG00001016150	Chd9	66	62.850	ENSTNIG00000003825	chd9	97	62.850	Tetraodon_nigroviridis
ENSCGRG00001016150	Chd9	67	90.541	ENSTBEG00000016052	-	81	90.991	Tupaia_belangeri
ENSCGRG00001016150	Chd9	90	91.108	ENSTTRG00000012674	CHD9	90	91.529	Tursiops_truncatus
ENSCGRG00001016150	Chd9	63	89.919	ENSUAMG00000022706	CHD9	98	96.337	Ursus_americanus
ENSCGRG00001016150	Chd9	90	90.341	ENSUMAG00000004043	CHD9	98	97.228	Ursus_maritimus
ENSCGRG00001016150	Chd9	97	90.597	ENSVPAG00000001374	CHD9	97	91.078	Vicugna_pacos
ENSCGRG00001016150	Chd9	99	91.875	ENSVVUG00000019435	CHD9	99	92.465	Vulpes_vulpes
ENSCGRG00001016150	Chd9	99	72.291	ENSXETG00000000349	chd9	96	75.520	Xenopus_tropicalis
ENSCGRG00001016150	Chd9	79	70.744	ENSXCOG00000012997	chd9	98	68.643	Xiphophorus_couchianus
ENSCGRG00001016150	Chd9	84	70.287	ENSXMAG00000016192	chd9	99	68.942	Xiphophorus_maculatus