EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCGRG00001016344 (Gene tree)
Gene ID: -
Gene Symbol: Cpsf1
Alias: -
Full Name: cleavage and polyadenylation specific factor 1
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Minus strand
Length: 17629 bases
Position: chrscaffold_0:137135990-137153618
Accession: 100761673
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001015853	CPSF_A	PF03178.15	2.2e-92	1	1
ENSCGRP00001015874	CPSF_A	PF03178.15	4.6e-92	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001020096	-	9092	-	ENSCGRP00001015853	1441 (aa)	XP_007646423	UPI0004542812
ENSCGRT00001020117	-	4335	-	ENSCGRP00001015874	1444 (aa)	-	-

Gene Model

Click here to download ENSCGRG00001016344's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001016344's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001016344	Cpsf1	100	96.535	ENSG00000071894	CPSF1	100	96.535	Homo_sapiens
ENSCGRG00001016344	Cpsf1	100	77.688	ENSAPOG00000019621	cpsf1	100	77.890	Acanthochromis_polyacanthus
ENSCGRG00001016344	Cpsf1	97	94.282	ENSAMEG00000005557	CPSF1	100	94.282	Ailuropoda_melanoleuca
ENSCGRG00001016344	Cpsf1	100	78.324	ENSACIG00000006112	cpsf1	100	78.601	Amphilophus_citrinellus
ENSCGRG00001016344	Cpsf1	100	79.256	ENSAOCG00000007120	cpsf1	100	79.394	Amphiprion_ocellaris
ENSCGRG00001016344	Cpsf1	100	79.669	ENSAPEG00000005755	cpsf1	100	79.807	Amphiprion_percula
ENSCGRG00001016344	Cpsf1	100	77.598	ENSATEG00000011097	cpsf1	100	78.070	Anabas_testudineus
ENSCGRG00001016344	Cpsf1	93	81.385	ENSACAG00000009655	CPSF1	100	81.385	Anolis_carolinensis
ENSCGRG00001016344	Cpsf1	100	96.463	ENSANAG00000036514	CPSF1	100	96.463	Aotus_nancymaae
ENSCGRG00001016344	Cpsf1	100	77.216	ENSACLG00000012231	cpsf1	99	78.873	Astatotilapia_calliptera
ENSCGRG00001016344	Cpsf1	100	73.997	ENSAMXG00000008485	cpsf1	100	73.997	Astyanax_mexicanus
ENSCGRG00001016344	Cpsf1	100	94.010	ENSBTAG00000008355	CPSF1	100	94.308	Bos_taurus
ENSCGRG00001016344	Cpsf1	100	31.971	WBGene00022301	cpsf-1	100	40.000	Caenorhabditis_elegans
ENSCGRG00001016344	Cpsf1	100	96.533	ENSCJAG00000021421	CPSF1	100	96.533	Callithrix_jacchus
ENSCGRG00001016344	Cpsf1	97	95.994	ENSCAFG00000001600	CPSF1	100	96.116	Canis_familiaris
ENSCGRG00001016344	Cpsf1	100	96.122	ENSCAFG00020020821	CPSF1	100	96.122	Canis_lupus_dingo
ENSCGRG00001016344	Cpsf1	100	90.361	ENSCHIG00000015833	CPSF1	100	90.361	Capra_hircus
ENSCGRG00001016344	Cpsf1	100	97.226	ENSTSYG00000028560	CPSF1	100	97.226	Carlito_syrichta
ENSCGRG00001016344	Cpsf1	97	96.126	ENSCAPG00000014921	CPSF1	99	96.126	Cavia_aperea
ENSCGRG00001016344	Cpsf1	100	95.700	ENSCPOG00000011448	CPSF1	100	95.700	Cavia_porcellus
ENSCGRG00001016344	Cpsf1	100	96.602	ENSCCAG00000037658	CPSF1	100	96.602	Cebus_capucinus
ENSCGRG00001016344	Cpsf1	100	96.394	ENSCATG00000037234	CPSF1	99	97.612	Cercocebus_atys
ENSCGRG00001016344	Cpsf1	100	97.363	ENSCLAG00000012166	CPSF1	100	97.363	Chinchilla_lanigera
ENSCGRG00001016344	Cpsf1	100	96.463	ENSCSAG00000008502	CPSF1	100	96.463	Chlorocebus_sabaeus
ENSCGRG00001016344	Cpsf1	99	87.605	ENSCPBG00000018910	CPSF1	96	87.605	Chrysemys_picta_bellii
ENSCGRG00001016344	Cpsf1	96	48.565	ENSCING00000000514	-	100	48.494	Ciona_intestinalis
ENSCGRG00001016344	Cpsf1	99	48.143	ENSCSAVG00000002293	-	98	49.765	Ciona_savignyi
ENSCGRG00001016344	Cpsf1	99	90.693	ENSCANG00000032760	CPSF1	99	90.693	Colobus_angolensis_palliatus
ENSCGRG00001016344	Cpsf1	100	97.507	ENSCGRG00000003118	Cpsf1	100	97.507	Cricetulus_griseus_crigri
ENSCGRG00001016344	Cpsf1	100	77.616	ENSCSEG00000013464	cpsf1	100	77.685	Cynoglossus_semilaevis
ENSCGRG00001016344	Cpsf1	85	76.869	ENSCVAG00000014059	cpsf1	100	75.926	Cyprinodon_variegatus
ENSCGRG00001016344	Cpsf1	100	79.422	ENSDARG00000034178	cpsf1	100	79.491	Danio_rerio
ENSCGRG00001016344	Cpsf1	68	96.522	ENSDNOG00000043654	CPSF1	94	96.522	Dasypus_novemcinctus
ENSCGRG00001016344	Cpsf1	97	96.628	ENSDORG00000006278	Cpsf1	99	96.821	Dipodomys_ordii
ENSCGRG00001016344	Cpsf1	100	44.983	FBgn0024698	Cpsf160	100	44.879	Drosophila_melanogaster
ENSCGRG00001016344	Cpsf1	80	97.987	ENSETEG00000006022	CPSF1	83	97.987	Echinops_telfairi
ENSCGRG00001016344	Cpsf1	100	96.607	ENSEASG00005010774	CPSF1	100	96.607	Equus_asinus_asinus
ENSCGRG00001016344	Cpsf1	100	96.607	ENSECAG00000022209	CPSF1	100	96.607	Equus_caballus
ENSCGRG00001016344	Cpsf1	100	94.740	ENSEEUG00000000471	CPSF1	100	94.740	Erinaceus_europaeus
ENSCGRG00001016344	Cpsf1	100	77.382	ENSELUG00000012271	cpsf1	100	77.873	Esox_lucius
ENSCGRG00001016344	Cpsf1	100	97.294	ENSFDAG00000016060	CPSF1	100	97.294	Fukomys_damarensis
ENSCGRG00001016344	Cpsf1	100	76.844	ENSFHEG00000016801	cpsf1	100	76.912	Fundulus_heteroclitus
ENSCGRG00001016344	Cpsf1	100	78.015	ENSGMOG00000000796	cpsf1	100	78.222	Gadus_morhua
ENSCGRG00001016344	Cpsf1	95	85.714	ENSGAFG00000018890	cpsf1	100	85.714	Gambusia_affinis
ENSCGRG00001016344	Cpsf1	100	78.404	ENSGACG00000008703	cpsf1	100	78.395	Gasterosteus_aculeatus
ENSCGRG00001016344	Cpsf1	100	84.083	ENSGAGG00000004276	CPSF1	98	87.741	Gopherus_agassizii
ENSCGRG00001016344	Cpsf1	100	96.461	ENSGGOG00000016185	CPSF1	100	96.461	Gorilla_gorilla
ENSCGRG00001016344	Cpsf1	100	79.432	ENSHBUG00000018900	cpsf1	100	79.778	Haplochromis_burtoni
ENSCGRG00001016344	Cpsf1	100	97.294	ENSHGLG00000016139	CPSF1	100	97.294	Heterocephalus_glaber_female
ENSCGRG00001016344	Cpsf1	100	97.224	ENSHGLG00100009750	CPSF1	100	97.224	Heterocephalus_glaber_male
ENSCGRG00001016344	Cpsf1	100	77.069	ENSHCOG00000018509	cpsf1	100	77.189	Hippocampus_comes
ENSCGRG00001016344	Cpsf1	100	76.204	ENSIPUG00000011259	cpsf1	100	76.204	Ictalurus_punctatus
ENSCGRG00001016344	Cpsf1	97	96.926	ENSSTOG00000009957	CPSF1	99	96.926	Ictidomys_tridecemlineatus
ENSCGRG00001016344	Cpsf1	100	97.779	ENSJJAG00000023002	Cpsf1	100	97.779	Jaculus_jaculus
ENSCGRG00001016344	Cpsf1	91	85.893	ENSKMAG00000001940	cpsf1	99	85.893	Kryptolebias_marmoratus
ENSCGRG00001016344	Cpsf1	100	77.093	ENSLBEG00000003601	cpsf1	100	77.575	Labrus_bergylta
ENSCGRG00001016344	Cpsf1	88	81.971	ENSLACG00000000233	CPSF1	92	81.971	Latimeria_chalumnae
ENSCGRG00001016344	Cpsf1	100	78.522	ENSLOCG00000008484	cpsf1	100	78.798	Lepisosteus_oculatus
ENSCGRG00001016344	Cpsf1	97	95.061	ENSLAFG00000022601	CPSF1	100	95.061	Loxodonta_africana
ENSCGRG00001016344	Cpsf1	100	96.394	ENSMFAG00000037013	CPSF1	100	96.394	Macaca_fascicularis
ENSCGRG00001016344	Cpsf1	100	96.463	ENSMMUG00000007380	CPSF1	100	96.463	Macaca_mulatta
ENSCGRG00001016344	Cpsf1	97	96.485	ENSMNEG00000043564	CPSF1	100	96.485	Macaca_nemestrina
ENSCGRG00001016344	Cpsf1	100	96.394	ENSMLEG00000043010	CPSF1	100	96.394	Mandrillus_leucophaeus
ENSCGRG00001016344	Cpsf1	100	78.296	ENSMAMG00000003803	cpsf1	100	78.567	Mastacembelus_armatus
ENSCGRG00001016344	Cpsf1	100	77.285	ENSMZEG00005001168	cpsf1	100	77.632	Maylandia_zebra
ENSCGRG00001016344	Cpsf1	100	99.237	ENSMAUG00000003601	Cpsf1	100	99.237	Mesocricetus_auratus
ENSCGRG00001016344	Cpsf1	100	96.808	ENSMICG00000015767	CPSF1	100	96.808	Microcebus_murinus
ENSCGRG00001016344	Cpsf1	100	98.820	ENSMOCG00000022758	Cpsf1	100	98.820	Microtus_ochrogaster
ENSCGRG00001016344	Cpsf1	100	79.031	ENSMMOG00000021245	cpsf1	100	79.170	Mola_mola
ENSCGRG00001016344	Cpsf1	100	92.685	ENSMODG00000010755	CPSF1	100	92.685	Monodelphis_domestica
ENSCGRG00001016344	Cpsf1	100	77.522	ENSMALG00000020545	cpsf1	100	77.725	Monopterus_albus
ENSCGRG00001016344	Cpsf1	100	98.959	MGP_CAROLIEiJ_G0019936	Cpsf1	100	98.959	Mus_caroli
ENSCGRG00001016344	Cpsf1	100	98.820	ENSMUSG00000034022	Cpsf1	100	98.820	Mus_musculus
ENSCGRG00001016344	Cpsf1	100	98.890	MGP_PahariEiJ_G0019946	Cpsf1	100	98.890	Mus_pahari
ENSCGRG00001016344	Cpsf1	100	98.890	MGP_SPRETEiJ_G0020839	Cpsf1	100	98.890	Mus_spretus
ENSCGRG00001016344	Cpsf1	94	95.330	ENSMPUG00000006419	CPSF1	93	95.330	Mustela_putorius_furo
ENSCGRG00001016344	Cpsf1	100	97.918	ENSNGAG00000022460	Cpsf1	100	97.918	Nannospalax_galili
ENSCGRG00001016344	Cpsf1	100	74.810	ENSNBRG00000000813	cpsf1	100	74.810	Neolamprologus_brichardi
ENSCGRG00001016344	Cpsf1	86	84.631	ENSNLEG00000010633	-	100	88.426	Nomascus_leucogenys
ENSCGRG00001016344	Cpsf1	82	97.674	ENSMEUG00000014922	CPSF1	85	97.674	Notamacropus_eugenii
ENSCGRG00001016344	Cpsf1	61	96.939	ENSOPRG00000004693	-	71	96.939	Ochotona_princeps
ENSCGRG00001016344	Cpsf1	100	97.502	ENSODEG00000013995	CPSF1	100	97.502	Octodon_degus
ENSCGRG00001016344	Cpsf1	100	79.848	ENSONIG00000007676	cpsf1	100	80.125	Oreochromis_niloticus
ENSCGRG00001016344	Cpsf1	58	92.143	ENSOANG00000010716	CPSF1	88	92.143	Ornithorhynchus_anatinus
ENSCGRG00001016344	Cpsf1	100	77.566	ENSORLG00000013544	cpsf1	92	86.831	Oryzias_latipes
ENSCGRG00001016344	Cpsf1	100	77.566	ENSORLG00020021693	cpsf1	92	86.831	Oryzias_latipes_hni
ENSCGRG00001016344	Cpsf1	100	77.551	ENSORLG00015009979	cpsf1	100	77.483	Oryzias_latipes_hsok
ENSCGRG00001016344	Cpsf1	100	77.452	ENSOMEG00000011849	cpsf1	100	77.793	Oryzias_melastigma
ENSCGRG00001016344	Cpsf1	100	96.879	ENSOGAG00000000315	CPSF1	100	96.879	Otolemur_garnettii
ENSCGRG00001016344	Cpsf1	100	96.463	ENSPPAG00000019280	CPSF1	100	96.463	Pan_paniscus
ENSCGRG00001016344	Cpsf1	100	94.819	ENSPTRG00000051253	-	100	94.819	Pan_troglodytes
ENSCGRG00001016344	Cpsf1	100	96.463	ENSPTRG00000049288	-	100	96.463	Pan_troglodytes
ENSCGRG00001016344	Cpsf1	97	96.341	ENSPANG00000015005	CPSF1	100	96.341	Papio_anubis
ENSCGRG00001016344	Cpsf1	100	80.484	ENSPKIG00000002582	cpsf1	100	81.032	Paramormyrops_kingsleyae
ENSCGRG00001016344	Cpsf1	100	92.616	ENSPCIG00000009035	CPSF1	100	92.616	Phascolarctos_cinereus
ENSCGRG00001016344	Cpsf1	100	76.168	ENSPFOG00000012870	cpsf1	100	76.236	Poecilia_formosa
ENSCGRG00001016344	Cpsf1	100	75.913	ENSPREG00000016307	cpsf1	100	76.116	Poecilia_reticulata
ENSCGRG00001016344	Cpsf1	100	88.488	ENSPPYG00000018973	CPSF1	100	88.488	Pongo_abelii
ENSCGRG00001016344	Cpsf1	91	95.170	ENSPCAG00000011541	CPSF1	94	95.170	Procavia_capensis
ENSCGRG00001016344	Cpsf1	100	93.065	ENSPCOG00000020001	CPSF1	100	93.065	Propithecus_coquereli
ENSCGRG00001016344	Cpsf1	91	98.857	ENSPVAG00000006761	CPSF1	91	98.857	Pteropus_vampyrus
ENSCGRG00001016344	Cpsf1	100	78.401	ENSPNYG00000004906	cpsf1	100	78.742	Pundamilia_nyererei
ENSCGRG00001016344	Cpsf1	100	75.000	ENSPNAG00000024395	cpsf1	100	75.000	Pygocentrus_nattereri
ENSCGRG00001016344	Cpsf1	100	99.237	ENSRNOG00000030705	Cpsf1	100	99.237	Rattus_norvegicus
ENSCGRG00001016344	Cpsf1	100	96.394	ENSRBIG00000044907	CPSF1	100	96.394	Rhinopithecus_bieti
ENSCGRG00001016344	Cpsf1	100	96.325	ENSRROG00000044861	CPSF1	100	96.325	Rhinopithecus_roxellana
ENSCGRG00001016344	Cpsf1	97	96.413	ENSSBOG00000027177	CPSF1	100	96.413	Saimiri_boliviensis_boliviensis
ENSCGRG00001016344	Cpsf1	100	92.616	ENSSHAG00000006500	CPSF1	100	92.616	Sarcophilus_harrisii
ENSCGRG00001016344	Cpsf1	100	78.222	ENSSFOG00015004606	cpsf1	100	81.295	Scleropages_formosus
ENSCGRG00001016344	Cpsf1	100	77.590	ENSSMAG00000020547	cpsf1	100	77.928	Scophthalmus_maximus
ENSCGRG00001016344	Cpsf1	100	79.115	ENSSDUG00000001100	cpsf1	100	79.391	Seriola_dumerili
ENSCGRG00001016344	Cpsf1	100	79.377	ENSSLDG00000003619	cpsf1	100	79.516	Seriola_lalandi_dorsalis
ENSCGRG00001016344	Cpsf1	89	97.917	ENSSARG00000003643	CPSF1	92	97.917	Sorex_araneus
ENSCGRG00001016344	Cpsf1	96	87.599	ENSSPUG00000014396	CPSF1	100	87.599	Sphenodon_punctatus
ENSCGRG00001016344	Cpsf1	100	77.876	ENSSPAG00000005349	cpsf1	100	78.078	Stegastes_partitus
ENSCGRG00001016344	Cpsf1	100	95.291	ENSSSCG00000005906	CPSF1	100	95.291	Sus_scrofa
ENSCGRG00001016344	Cpsf1	96	77.957	ENSTRUG00000013134	cpsf1	99	78.097	Takifugu_rubripes
ENSCGRG00001016344	Cpsf1	100	78.694	ENSTNIG00000014027	cpsf1	100	78.763	Tetraodon_nigroviridis
ENSCGRG00001016344	Cpsf1	77	88.448	ENSTBEG00000001756	CPSF1	91	88.448	Tupaia_belangeri
ENSCGRG00001016344	Cpsf1	90	97.064	ENSTTRG00000001937	CPSF1	90	97.064	Tursiops_truncatus
ENSCGRG00001016344	Cpsf1	97	96.280	ENSUAMG00000006476	CPSF1	98	96.280	Ursus_americanus
ENSCGRG00001016344	Cpsf1	100	77.370	ENSXCOG00000003608	cpsf1	100	77.509	Xiphophorus_couchianus
ENSCGRG00001016344	Cpsf1	100	76.849	ENSXMAG00000005798	cpsf1	100	77.125	Xiphophorus_maculatus