EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCGRG00001016365 (Gene tree)
Gene ID: -
Gene Symbol: Cnot1
Alias: 6030411K04Rik
Full Name: CCR4-NOT transcription complex subunit 1
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Minus strand
Length: 77190 bases
Position: chrscaffold_20:11006659-11083848
Accession: 100761778
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001015911	Not1	PF04054.15	9.5e-153	1	1
ENSCGRP00001015944	Not1	PF04054.15	1.3e-121	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001020154	-	12130	-	ENSCGRP00001015911	2376 (aa)	XP_007648389	UPI0004547B93
ENSCGRT00001020188	-	6981	-	ENSCGRP00001015944	2326 (aa)	-	UPI00022F5F10

Gene Model

Click here to download ENSCGRG00001016365's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001016365's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001016365	Cnot1	100	99.327	ENSG00000125107	CNOT1	100	100.000	Homo_sapiens
ENSCGRG00001016365	Cnot1	97	96.774	ENSAPOG00000005042	cnot1	100	96.774	Acanthochromis_polyacanthus
ENSCGRG00001016365	Cnot1	100	99.158	ENSAMEG00000017298	CNOT1	100	99.158	Ailuropoda_melanoleuca
ENSCGRG00001016365	Cnot1	90	89.702	ENSACIG00000016003	cnot1	100	89.842	Amphilophus_citrinellus
ENSCGRG00001016365	Cnot1	100	90.386	ENSAPEG00000022342	cnot1	100	90.512	Amphiprion_percula
ENSCGRG00001016365	Cnot1	97	96.914	ENSATEG00000012892	cnot1	100	96.914	Anabas_testudineus
ENSCGRG00001016365	Cnot1	100	97.353	ENSAPLG00000007162	CNOT1	100	97.353	Anas_platyrhynchos
ENSCGRG00001016365	Cnot1	92	95.686	ENSACAG00000001602	CNOT1	98	95.594	Anolis_carolinensis
ENSCGRG00001016365	Cnot1	100	97.936	ENSANAG00000038198	CNOT1	100	97.936	Aotus_nancymaae
ENSCGRG00001016365	Cnot1	97	96.914	ENSACLG00000014234	cnot1	100	96.914	Astatotilapia_calliptera
ENSCGRG00001016365	Cnot1	100	90.787	ENSAMXG00000013170	cnot1	100	90.734	Astyanax_mexicanus
ENSCGRG00001016365	Cnot1	100	99.411	ENSBTAG00000020782	CNOT1	100	99.411	Bos_taurus
ENSCGRG00001016365	Cnot1	81	40.442	WBGene00002845	let-711	92	54.430	Caenorhabditis_elegans
ENSCGRG00001016365	Cnot1	100	99.285	ENSCJAG00000011318	CNOT1	100	99.285	Callithrix_jacchus
ENSCGRG00001016365	Cnot1	100	99.076	ENSCAFG00000008426	CNOT1	100	99.076	Canis_familiaris
ENSCGRG00001016365	Cnot1	100	99.355	ENSCAFG00020010156	CNOT1	100	99.355	Canis_lupus_dingo
ENSCGRG00001016365	Cnot1	100	99.411	ENSCHIG00000010452	CNOT1	100	99.411	Capra_hircus
ENSCGRG00001016365	Cnot1	100	99.453	ENSTSYG00000006888	CNOT1	100	99.453	Carlito_syrichta
ENSCGRG00001016365	Cnot1	100	94.823	ENSCPOG00000013026	CNOT1	100	94.823	Cavia_porcellus
ENSCGRG00001016365	Cnot1	100	97.727	ENSCCAG00000026333	CNOT1	100	97.727	Cebus_capucinus
ENSCGRG00001016365	Cnot1	100	99.369	ENSCATG00000032625	CNOT1	100	99.369	Cercocebus_atys
ENSCGRG00001016365	Cnot1	100	99.495	ENSCLAG00000006289	CNOT1	100	99.495	Chinchilla_lanigera
ENSCGRG00001016365	Cnot1	100	99.369	ENSCSAG00000004731	CNOT1	100	99.369	Chlorocebus_sabaeus
ENSCGRG00001016365	Cnot1	81	100.000	ENSCHOG00000009712	CNOT1	83	100.000	Choloepus_hoffmanni
ENSCGRG00001016365	Cnot1	98	95.486	ENSCPBG00000026222	CNOT1	99	98.472	Chrysemys_picta_bellii
ENSCGRG00001016365	Cnot1	100	58.953	ENSCING00000009149	-	100	58.669	Ciona_intestinalis
ENSCGRG00001016365	Cnot1	89	63.067	ENSCSAVG00000002414	-	95	78.808	Ciona_savignyi
ENSCGRG00001016365	Cnot1	100	97.517	ENSCANG00000040534	CNOT1	100	97.517	Colobus_angolensis_palliatus
ENSCGRG00001016365	Cnot1	100	100.000	ENSCGRG00000001714	Cnot1	100	100.000	Cricetulus_griseus_crigri
ENSCGRG00001016365	Cnot1	100	82.854	ENSCVAG00000018930	cnot1	100	82.687	Cyprinodon_variegatus
ENSCGRG00001016365	Cnot1	100	89.732	ENSDARG00000004174	cnot1	100	89.256	Danio_rerio
ENSCGRG00001016365	Cnot1	100	96.929	ENSDNOG00000013250	CNOT1	100	96.929	Dasypus_novemcinctus
ENSCGRG00001016365	Cnot1	99	46.111	FBgn0085436	Not1	99	48.279	Drosophila_melanogaster
ENSCGRG00001016365	Cnot1	84	97.440	ENSETEG00000012806	CNOT1	84	97.440	Echinops_telfairi
ENSCGRG00001016365	Cnot1	81	82.212	ENSEBUG00000011534	cnot1	95	82.212	Eptatretus_burgeri
ENSCGRG00001016365	Cnot1	97	99.259	ENSEASG00005005819	CNOT1	100	98.802	Equus_asinus_asinus
ENSCGRG00001016365	Cnot1	100	99.537	ENSECAG00000009889	CNOT1	100	99.537	Equus_caballus
ENSCGRG00001016365	Cnot1	90	98.903	ENSEEUG00000006015	CNOT1	90	98.903	Erinaceus_europaeus
ENSCGRG00001016365	Cnot1	100	89.611	ENSELUG00000014085	cnot1	100	89.367	Esox_lucius
ENSCGRG00001016365	Cnot1	100	99.161	ENSFCAG00000025155	CNOT1	100	99.161	Felis_catus
ENSCGRG00001016365	Cnot1	100	97.391	ENSFALG00000007285	CNOT1	100	97.391	Ficedula_albicollis
ENSCGRG00001016365	Cnot1	100	99.411	ENSFDAG00000013399	CNOT1	100	99.411	Fukomys_damarensis
ENSCGRG00001016365	Cnot1	100	90.130	ENSFHEG00000020574	cnot1	100	90.046	Fundulus_heteroclitus
ENSCGRG00001016365	Cnot1	92	89.471	ENSGMOG00000012864	cnot1	100	89.662	Gadus_morhua
ENSCGRG00001016365	Cnot1	100	97.433	ENSGALG00000002301	CNOT1	100	97.433	Gallus_gallus
ENSCGRG00001016365	Cnot1	100	89.001	ENSGAFG00000015005	cnot1	100	88.959	Gambusia_affinis
ENSCGRG00001016365	Cnot1	92	90.125	ENSGACG00000002606	cnot1	100	95.631	Gasterosteus_aculeatus
ENSCGRG00001016365	Cnot1	100	97.476	ENSGAGG00000022646	CNOT1	100	97.476	Gopherus_agassizii
ENSCGRG00001016365	Cnot1	100	99.285	ENSGGOG00000009547	CNOT1	100	99.285	Gorilla_gorilla
ENSCGRG00001016365	Cnot1	97	96.914	ENSHBUG00000001729	cnot1	100	96.914	Haplochromis_burtoni
ENSCGRG00001016365	Cnot1	100	99.327	ENSHGLG00000014322	CNOT1	100	99.327	Heterocephalus_glaber_female
ENSCGRG00001016365	Cnot1	100	89.256	ENSHCOG00000006501	cnot1	100	89.432	Hippocampus_comes
ENSCGRG00001016365	Cnot1	100	88.758	ENSIPUG00000011915	cnot1	100	89.220	Ictalurus_punctatus
ENSCGRG00001016365	Cnot1	100	99.411	ENSSTOG00000005490	CNOT1	100	99.411	Ictidomys_tridecemlineatus
ENSCGRG00001016365	Cnot1	100	98.882	ENSJJAG00000000633	Cnot1	100	98.882	Jaculus_jaculus
ENSCGRG00001016365	Cnot1	100	89.958	ENSKMAG00000006149	cnot1	100	89.883	Kryptolebias_marmoratus
ENSCGRG00001016365	Cnot1	95	96.407	ENSLBEG00000004740	cnot1	100	96.407	Labrus_bergylta
ENSCGRG00001016365	Cnot1	100	94.949	ENSLACG00000010869	CNOT1	100	94.949	Latimeria_chalumnae
ENSCGRG00001016365	Cnot1	100	92.785	ENSLOCG00000006324	cnot1	100	92.827	Lepisosteus_oculatus
ENSCGRG00001016365	Cnot1	100	99.201	ENSLAFG00000000098	CNOT1	100	99.201	Loxodonta_africana
ENSCGRG00001016365	Cnot1	100	99.355	ENSMFAG00000035888	CNOT1	100	99.355	Macaca_fascicularis
ENSCGRG00001016365	Cnot1	100	99.327	ENSMMUG00000014625	CNOT1	100	99.327	Macaca_mulatta
ENSCGRG00001016365	Cnot1	100	96.776	ENSMNEG00000031820	CNOT1	100	99.346	Macaca_nemestrina
ENSCGRG00001016365	Cnot1	100	98.151	ENSMLEG00000040933	CNOT1	100	98.151	Mandrillus_leucophaeus
ENSCGRG00001016365	Cnot1	100	89.299	ENSMAMG00000016524	cnot1	100	89.295	Mastacembelus_armatus
ENSCGRG00001016365	Cnot1	97	96.914	ENSMZEG00005016210	cnot1	100	96.914	Maylandia_zebra
ENSCGRG00001016365	Cnot1	100	97.180	ENSMGAG00000001908	CNOT1	100	97.180	Meleagris_gallopavo
ENSCGRG00001016365	Cnot1	100	99.242	ENSMICG00000007071	CNOT1	100	99.242	Microcebus_murinus
ENSCGRG00001016365	Cnot1	100	99.790	ENSMOCG00000017969	Cnot1	100	99.790	Microtus_ochrogaster
ENSCGRG00001016365	Cnot1	97	93.548	ENSMMOG00000019134	cnot1	100	93.548	Mola_mola
ENSCGRG00001016365	Cnot1	100	97.560	ENSMODG00000014199	CNOT1	100	97.560	Monodelphis_domestica
ENSCGRG00001016365	Cnot1	100	90.004	ENSMALG00000008645	cnot1	100	90.046	Monopterus_albus
ENSCGRG00001016365	Cnot1	95	100.000	MGP_CAROLIEiJ_G0031430	Cnot1	92	100.000	Mus_caroli
ENSCGRG00001016365	Cnot1	100	99.832	ENSMUSG00000036550	Cnot1	100	99.832	Mus_musculus
ENSCGRG00001016365	Cnot1	100	99.790	MGP_PahariEiJ_G0023028	Cnot1	100	99.790	Mus_pahari
ENSCGRG00001016365	Cnot1	100	99.832	MGP_SPRETEiJ_G0032549	Cnot1	100	99.832	Mus_spretus
ENSCGRG00001016365	Cnot1	100	99.453	ENSMPUG00000004830	CNOT1	100	99.453	Mustela_putorius_furo
ENSCGRG00001016365	Cnot1	100	98.864	ENSMLUG00000003728	CNOT1	100	98.864	Myotis_lucifugus
ENSCGRG00001016365	Cnot1	100	99.537	ENSNGAG00000018628	Cnot1	100	99.537	Nannospalax_galili
ENSCGRG00001016365	Cnot1	94	96.914	ENSNBRG00000019358	cnot1	100	96.914	Neolamprologus_brichardi
ENSCGRG00001016365	Cnot1	100	99.269	ENSNLEG00000003566	CNOT1	100	99.269	Nomascus_leucogenys
ENSCGRG00001016365	Cnot1	86	97.763	ENSMEUG00000006145	CNOT1	88	97.763	Notamacropus_eugenii
ENSCGRG00001016365	Cnot1	86	100.000	ENSOPRG00000005604	CNOT1	86	100.000	Ochotona_princeps
ENSCGRG00001016365	Cnot1	100	99.369	ENSODEG00000016337	CNOT1	100	99.369	Octodon_degus
ENSCGRG00001016365	Cnot1	100	90.327	ENSONIG00000007358	cnot1	100	90.159	Oreochromis_niloticus
ENSCGRG00001016365	Cnot1	92	97.950	ENSOANG00000012109	CNOT1	100	97.978	Ornithorhynchus_anatinus
ENSCGRG00001016365	Cnot1	100	99.369	ENSOCUG00000006911	CNOT1	100	99.369	Oryctolagus_cuniculus
ENSCGRG00001016365	Cnot1	100	90.398	ENSORLG00000013734	cnot1	100	90.159	Oryzias_latipes
ENSCGRG00001016365	Cnot1	100	90.648	ENSORLG00020017012	cnot1	100	90.446	Oryzias_latipes_hni
ENSCGRG00001016365	Cnot1	100	90.476	ENSORLG00015007091	cnot1	100	90.017	Oryzias_latipes_hsok
ENSCGRG00001016365	Cnot1	100	89.918	ENSOMEG00000015124	cnot1	100	89.897	Oryzias_melastigma
ENSCGRG00001016365	Cnot1	100	99.327	ENSOGAG00000000543	CNOT1	100	99.327	Otolemur_garnettii
ENSCGRG00001016365	Cnot1	100	99.411	ENSOARG00000001567	CNOT1	100	99.411	Ovis_aries
ENSCGRG00001016365	Cnot1	100	99.327	ENSPPAG00000022013	CNOT1	100	99.327	Pan_paniscus
ENSCGRG00001016365	Cnot1	100	99.453	ENSPPRG00000004867	CNOT1	100	99.453	Panthera_pardus
ENSCGRG00001016365	Cnot1	100	99.453	ENSPTIG00000012589	CNOT1	100	99.453	Panthera_tigris_altaica
ENSCGRG00001016365	Cnot1	100	99.312	ENSPTRG00000008183	CNOT1	100	99.312	Pan_troglodytes
ENSCGRG00001016365	Cnot1	100	95.893	ENSPANG00000020901	CNOT1	100	95.893	Papio_anubis
ENSCGRG00001016365	Cnot1	100	92.027	ENSPKIG00000023538	CNOT1	100	91.985	Paramormyrops_kingsleyae
ENSCGRG00001016365	Cnot1	97	93.118	ENSPKIG00000002914	CNOT1	99	93.118	Paramormyrops_kingsleyae
ENSCGRG00001016365	Cnot1	100	97.348	ENSPSIG00000005499	CNOT1	100	97.348	Pelodiscus_sinensis
ENSCGRG00001016365	Cnot1	100	81.250	ENSPMAG00000009381	cnot1	100	81.150	Petromyzon_marinus
ENSCGRG00001016365	Cnot1	100	97.466	ENSPCIG00000007343	CNOT1	100	98.472	Phascolarctos_cinereus
ENSCGRG00001016365	Cnot1	99	89.642	ENSPFOG00000003497	cnot1	100	89.429	Poecilia_formosa
ENSCGRG00001016365	Cnot1	95	96.008	ENSPLAG00000014018	cnot1	100	96.008	Poecilia_latipinna
ENSCGRG00001016365	Cnot1	95	96.008	ENSPMEG00000005868	cnot1	100	96.008	Poecilia_mexicana
ENSCGRG00001016365	Cnot1	95	96.008	ENSPREG00000018793	cnot1	100	96.008	Poecilia_reticulata
ENSCGRG00001016365	Cnot1	100	99.285	ENSPPYG00000007410	CNOT1	100	99.285	Pongo_abelii
ENSCGRG00001016365	Cnot1	90	97.104	ENSPCAG00000003241	CNOT1	90	97.104	Procavia_capensis
ENSCGRG00001016365	Cnot1	100	99.269	ENSPCOG00000027139	CNOT1	100	99.269	Propithecus_coquereli
ENSCGRG00001016365	Cnot1	100	96.886	ENSPVAG00000004243	CNOT1	100	96.886	Pteropus_vampyrus
ENSCGRG00001016365	Cnot1	97	96.914	ENSPNYG00000012919	cnot1	100	96.914	Pundamilia_nyererei
ENSCGRG00001016365	Cnot1	100	89.693	ENSPNAG00000000246	cnot1	100	90.114	Pygocentrus_nattereri
ENSCGRG00001016365	Cnot1	100	99.747	ENSRNOG00000012271	Cnot1	100	99.747	Rattus_norvegicus
ENSCGRG00001016365	Cnot1	100	97.248	ENSRBIG00000044598	CNOT1	100	97.248	Rhinopithecus_bieti
ENSCGRG00001016365	Cnot1	100	99.369	ENSRROG00000000906	CNOT1	100	99.369	Rhinopithecus_roxellana
ENSCGRG00001016365	Cnot1	56	31.373	YCR093W	CDC39	68	34.074	Saccharomyces_cerevisiae
ENSCGRG00001016365	Cnot1	100	95.069	ENSSBOG00000029155	CNOT1	100	95.069	Saimiri_boliviensis_boliviensis
ENSCGRG00001016365	Cnot1	100	97.729	ENSSHAG00000012187	CNOT1	100	97.729	Sarcophilus_harrisii
ENSCGRG00001016365	Cnot1	100	92.334	ENSSFOG00015017614	cnot1	100	92.291	Scleropages_formosus
ENSCGRG00001016365	Cnot1	97	96.914	ENSSMAG00000013844	cnot1	100	96.914	Scophthalmus_maximus
ENSCGRG00001016365	Cnot1	97	96.774	ENSSDUG00000021491	cnot1	100	96.774	Seriola_dumerili
ENSCGRG00001016365	Cnot1	97	96.774	ENSSLDG00000014816	cnot1	100	96.774	Seriola_lalandi_dorsalis
ENSCGRG00001016365	Cnot1	85	100.000	ENSSARG00000000762	CNOT1	88	100.000	Sorex_araneus
ENSCGRG00001016365	Cnot1	100	90.390	ENSSPAG00000018802	cnot1	100	90.180	Stegastes_partitus
ENSCGRG00001016365	Cnot1	100	99.327	ENSSSCG00000002799	CNOT1	100	99.327	Sus_scrofa
ENSCGRG00001016365	Cnot1	100	97.268	ENSTGUG00000005919	CNOT1	100	97.268	Taeniopygia_guttata
ENSCGRG00001016365	Cnot1	100	88.861	ENSTNIG00000018706	cnot1	100	88.778	Tetraodon_nigroviridis
ENSCGRG00001016365	Cnot1	80	100.000	ENSTBEG00000000720	CNOT1	80	100.000	Tupaia_belangeri
ENSCGRG00001016365	Cnot1	95	99.184	ENSTTRG00000008460	CNOT1	95	99.184	Tursiops_truncatus
ENSCGRG00001016365	Cnot1	100	99.453	ENSUAMG00000009251	CNOT1	100	99.453	Ursus_americanus
ENSCGRG00001016365	Cnot1	100	99.453	ENSUMAG00000021291	CNOT1	100	99.453	Ursus_maritimus
ENSCGRG00001016365	Cnot1	97	96.809	ENSVPAG00000008846	CNOT1	97	96.809	Vicugna_pacos
ENSCGRG00001016365	Cnot1	100	98.323	ENSVVUG00000024037	CNOT1	100	98.917	Vulpes_vulpes
ENSCGRG00001016365	Cnot1	100	90.008	ENSXETG00000015900	cnot1	100	89.798	Xenopus_tropicalis
ENSCGRG00001016365	Cnot1	100	89.169	ENSXCOG00000013552	cnot1	100	89.127	Xiphophorus_couchianus
ENSCGRG00001016365	Cnot1	100	89.211	ENSXMAG00000006031	cnot1	100	89.169	Xiphophorus_maculatus