EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00001016622 (Gene tree)
Gene ID: -
Gene Symbol: Ciao1
Alias: Wdr39
Full Name: cytosolic iron-sulfur assembly component 1
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Plus strand
Length: 4122 bases
Position: chrscaffold_3:27438216-27442337
Accession: 100758531
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001016233	eIF2A	PF08662.11	0.00016	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001020470	-	1200	-	ENSCGRP00001016226	339 (aa)	XP_007638033	UPI0004542ED7
ENSCGRT00001020479	-	702	-	ENSCGRP00001016235	233 (aa)	-	-
ENSCGRT00001020477	-	531	-	ENSCGRP00001016233	176 (aa)	-	-

Gene Model

Click here to download ENSCGRG00001016622's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001016622's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00001016622	Ciao1	82	35.556	ENSCGRG00001019447	Wdr5	85	35.556
ENSCGRG00001016622	Ciao1	86	35.354	ENSCGRG00001007357	Poc1a	86	35.354
ENSCGRG00001016622	Ciao1	89	34.074	ENSCGRG00001013271	Wdr5b	86	34.074

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001016622	Ciao1	99	62.874	ENSCING00000006781	-	99	62.874	Ciona_intestinalis
ENSCGRG00001016622	Ciao1	96	61.677	ENSCSAVG00000003355	-	99	61.677	Ciona_savignyi
ENSCGRG00001016622	Ciao1	94	80.723	ENSMZEG00005010812	ciao1	100	80.723	Maylandia_zebra
ENSCGRG00001016622	Ciao1	100	97.159	ENSMAUG00000021994	Ciao1	100	97.159	Mesocricetus_auratus
ENSCGRG00001016622	Ciao1	99	95.429	ENSMOCG00000009518	Ciao1	99	95.429	Microtus_ochrogaster
ENSCGRG00001016622	Ciao1	94	84.337	ENSMALG00000002097	ciao1	99	84.337	Monopterus_albus
ENSCGRG00001016622	Ciao1	99	97.143	MGP_CAROLIEiJ_G0024251	Ciao1	99	97.143	Mus_caroli
ENSCGRG00001016622	Ciao1	99	96.571	ENSMUSG00000003662	Ciao1	99	96.571	Mus_musculus
ENSCGRG00001016622	Ciao1	99	96.571	MGP_PahariEiJ_G0025696	Ciao1	99	96.571	Mus_pahari
ENSCGRG00001016622	Ciao1	99	96.571	MGP_SPRETEiJ_G0025171	Ciao1	99	96.571	Mus_spretus
ENSCGRG00001016622	Ciao1	100	96.591	ENSPEMG00000015800	Ciao1	100	96.591	Peromyscus_maniculatus_bairdii