EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00001016772 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Minus strand
Length: 46643 bases
Position: chrscaffold_36:3822081-3868723
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001016446	TruB_N	PF01509.18	1.1e-49	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001020690	-	906	-	ENSCGRP00001016446	301 (aa)	-	-

Gene Model

Click here to download ENSCGRG00001016772's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001016772's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00001016772	-	65	31.658	ENSCGRG00001024441	Trub2	63	31.100
ENSCGRG00001016772	-	85	89.453	ENSCGRG00001010322	-	86	77.743

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001016772	-	99	70.774	ENSG00000165832	TRUB1	72	87.008	Homo_sapiens
ENSCGRG00001016772	-	71	69.302	ENSAPOG00000020565	trub1	79	68.349	Acanthochromis_polyacanthus
ENSCGRG00001016772	-	90	77.926	ENSAMEG00000014931	TRUB1	73	85.938	Ailuropoda_melanoleuca
ENSCGRG00001016772	-	71	62.791	ENSACIG00000003060	trub1	68	69.444	Amphilophus_citrinellus
ENSCGRG00001016772	-	71	69.302	ENSAOCG00000017188	trub1	82	66.667	Amphiprion_ocellaris
ENSCGRG00001016772	-	71	69.302	ENSAPEG00000015209	trub1	82	66.228	Amphiprion_percula
ENSCGRG00001016772	-	70	68.246	ENSATEG00000023291	trub1	75	68.421	Anabas_testudineus
ENSCGRG00001016772	-	80	73.333	ENSAPLG00000006808	TRUB1	85	73.529	Anas_platyrhynchos
ENSCGRG00001016772	-	79	69.620	ENSACAG00000009282	TRUB1	85	69.787	Anolis_carolinensis
ENSCGRG00001016772	-	90	79.730	ENSANAG00000022870	TRUB1	72	88.142	Aotus_nancymaae
ENSCGRG00001016772	-	90	58.909	ENSACLG00000000823	trub1	81	66.814	Astatotilapia_calliptera
ENSCGRG00001016772	-	78	65.957	ENSAMXG00000015845	trub1	78	66.094	Astyanax_mexicanus
ENSCGRG00001016772	-	90	77.517	ENSBTAG00000012955	TRUB1	72	85.882	Bos_taurus
ENSCGRG00001016772	-	90	79.798	ENSCJAG00000047815	TRUB1	82	79.791	Callithrix_jacchus
ENSCGRG00001016772	-	91	79.599	ENSCAFG00000011688	TRUB1	73	88.189	Canis_familiaris
ENSCGRG00001016772	-	91	79.599	ENSCAFG00020013237	TRUB1	82	79.791	Canis_lupus_dingo
ENSCGRG00001016772	-	90	78.188	ENSCHIG00000020884	TRUB1	76	86.667	Capra_hircus
ENSCGRG00001016772	-	90	79.125	ENSTSYG00000000446	TRUB1	72	87.795	Carlito_syrichta
ENSCGRG00001016772	-	84	77.470	ENSCAPG00000017088	TRUB1	99	77.470	Cavia_aperea
ENSCGRG00001016772	-	66	70.354	ENSCPOG00000030129	-	60	88.235	Cavia_porcellus
ENSCGRG00001016772	-	55	74.093	ENSCPOG00000040236	-	61	88.667	Cavia_porcellus
ENSCGRG00001016772	-	90	79.461	ENSCCAG00000028842	TRUB1	82	79.443	Cebus_capucinus
ENSCGRG00001016772	-	90	79.461	ENSCATG00000033431	TRUB1	73	87.795	Cercocebus_atys
ENSCGRG00001016772	-	55	75.130	ENSCLAG00000008664	TRUB1	75	75.410	Chinchilla_lanigera
ENSCGRG00001016772	-	90	79.461	ENSCSAG00000004891	TRUB1	73	87.795	Chlorocebus_sabaeus
ENSCGRG00001016772	-	90	63.423	ENSCHOG00000011931	TRUB1	72	69.020	Choloepus_hoffmanni
ENSCGRG00001016772	-	80	74.583	ENSCPBG00000003051	TRUB1	79	76.754	Chrysemys_picta_bellii
ENSCGRG00001016772	-	90	79.461	ENSCANG00000029445	TRUB1	73	87.795	Colobus_angolensis_palliatus
ENSCGRG00001016772	-	100	92.049	ENSCGRG00000010806	Trub1	100	92.049	Cricetulus_griseus_crigri
ENSCGRG00001016772	-	71	65.421	ENSCSEG00000011261	trub1	83	59.144	Cynoglossus_semilaevis
ENSCGRG00001016772	-	71	68.372	ENSCVAG00000008791	trub1	65	68.545	Cyprinodon_variegatus
ENSCGRG00001016772	-	82	63.855	ENSDARG00000053805	trub1	81	63.968	Danio_rerio
ENSCGRG00001016772	-	89	74.576	ENSDNOG00000001069	TRUB1	72	81.961	Dasypus_novemcinctus
ENSCGRG00001016772	-	85	87.160	ENSDORG00000010431	Trub1	74	87.451	Dipodomys_ordii
ENSCGRG00001016772	-	63	87.736	ENSETEG00000009183	TRUB1	53	88.462	Echinops_telfairi
ENSCGRG00001016772	-	90	78.523	ENSEASG00005014739	TRUB1	73	86.667	Equus_asinus_asinus
ENSCGRG00001016772	-	90	78.523	ENSECAG00000007177	TRUB1	73	86.667	Equus_caballus
ENSCGRG00001016772	-	89	66.667	ENSEEUG00000013993	TRUB1	71	72.157	Erinaceus_europaeus
ENSCGRG00001016772	-	71	69.159	ENSELUG00000000502	trub1	74	69.340	Esox_lucius
ENSCGRG00001016772	-	90	79.730	ENSFCAG00000031927	TRUB1	72	88.142	Felis_catus
ENSCGRG00001016772	-	79	75.527	ENSFALG00000002232	TRUB1	90	76.170	Ficedula_albicollis
ENSCGRG00001016772	-	55	76.166	ENSFDAG00000008140	TRUB1	61	90.000	Fukomys_damarensis
ENSCGRG00001016772	-	80	62.083	ENSFHEG00000004016	trub1	81	62.185	Fundulus_heteroclitus
ENSCGRG00001016772	-	80	72.917	ENSGALG00000009091	TRUB1	95	72.947	Gallus_gallus
ENSCGRG00001016772	-	70	64.319	ENSGAFG00000009193	trub1	74	64.455	Gambusia_affinis
ENSCGRG00001016772	-	66	66.332	ENSGACG00000015387	trub1	98	66.332	Gasterosteus_aculeatus
ENSCGRG00001016772	-	80	75.417	ENSGAGG00000009758	TRUB1	65	77.632	Gopherus_agassizii
ENSCGRG00001016772	-	90	78.788	ENSGGOG00000004583	TRUB1	72	87.008	Gorilla_gorilla
ENSCGRG00001016772	-	90	59.273	ENSHBUG00000016787	trub1	81	66.814	Haplochromis_burtoni
ENSCGRG00001016772	-	90	75.168	ENSHGLG00000015314	TRUB1	73	83.137	Heterocephalus_glaber_female
ENSCGRG00001016772	-	55	75.130	ENSHGLG00100009183	TRUB1	77	75.410	Heterocephalus_glaber_male
ENSCGRG00001016772	-	78	64.103	ENSHCOG00000017877	trub1	80	64.224	Hippocampus_comes
ENSCGRG00001016772	-	78	66.809	ENSIPUG00000017559	trub1	82	66.524	Ictalurus_punctatus
ENSCGRG00001016772	-	90	77.181	ENSSTOG00000003641	TRUB1	76	85.490	Ictidomys_tridecemlineatus
ENSCGRG00001016772	-	100	72.059	ENSJJAG00000011800	Trub1	75	85.098	Jaculus_jaculus
ENSCGRG00001016772	-	81	62.097	ENSKMAG00000006232	trub1	81	65.625	Kryptolebias_marmoratus
ENSCGRG00001016772	-	75	63.675	ENSLBEG00000026722	trub1	81	63.793	Labrus_bergylta
ENSCGRG00001016772	-	78	73.077	ENSLACG00000014885	TRUB1	78	73.707	Latimeria_chalumnae
ENSCGRG00001016772	-	76	70.870	ENSLOCG00000012979	trub1	74	73.394	Lepisosteus_oculatus
ENSCGRG00001016772	-	85	79.468	ENSLAFG00000015452	TRUB1	75	80.843	Loxodonta_africana
ENSCGRG00001016772	-	90	79.125	ENSMFAG00000031767	TRUB1	73	87.402	Macaca_fascicularis
ENSCGRG00001016772	-	90	79.461	ENSMMUG00000001902	TRUB1	73	87.795	Macaca_mulatta
ENSCGRG00001016772	-	90	74.411	ENSMNEG00000044646	TRUB1	72	81.890	Macaca_nemestrina
ENSCGRG00001016772	-	90	79.461	ENSMLEG00000042655	TRUB1	73	87.795	Mandrillus_leucophaeus
ENSCGRG00001016772	-	90	58.909	ENSMZEG00005024095	trub1	81	66.814	Maylandia_zebra
ENSCGRG00001016772	-	80	72.917	ENSMGAG00000011135	TRUB1	82	73.109	Meleagris_gallopavo
ENSCGRG00001016772	-	85	94.553	ENSMAUG00000011101	Trub1	75	94.902	Mesocricetus_auratus
ENSCGRG00001016772	-	90	78.859	ENSMICG00000016324	TRUB1	73	87.059	Microcebus_murinus
ENSCGRG00001016772	-	100	79.758	ENSMOCG00000017759	Trub1	77	94.118	Microtus_ochrogaster
ENSCGRG00001016772	-	85	78.516	ENSMODG00000009676	TRUB1	70	78.740	Monodelphis_domestica
ENSCGRG00001016772	-	85	87.160	MGP_CAROLIEiJ_G0023100	Trub1	75	87.451	Mus_caroli
ENSCGRG00001016772	-	85	86.770	ENSMUSG00000025086	Trub1	75	87.059	Mus_musculus
ENSCGRG00001016772	-	100	76.036	MGP_PahariEiJ_G0014588	Trub1	75	87.843	Mus_pahari
ENSCGRG00001016772	-	85	87.549	MGP_SPRETEiJ_G0024021	Trub1	75	87.843	Mus_spretus
ENSCGRG00001016772	-	90	80.135	ENSMPUG00000003556	TRUB1	73	88.583	Mustela_putorius_furo
ENSCGRG00001016772	-	91	78.261	ENSMLUG00000017686	TRUB1	75	86.614	Myotis_lucifugus
ENSCGRG00001016772	-	100	72.989	ENSNGAG00000018682	Trub1	73	88.627	Nannospalax_galili
ENSCGRG00001016772	-	71	68.837	ENSNBRG00000023393	trub1	76	69.014	Neolamprologus_brichardi
ENSCGRG00001016772	-	90	78.451	ENSNLEG00000016345	TRUB1	72	86.614	Nomascus_leucogenys
ENSCGRG00001016772	-	57	85.380	ENSMEUG00000006603	TRUB1	63	85.799	Notamacropus_eugenii
ENSCGRG00001016772	-	90	73.826	ENSOPRG00000009371	TRUB1	84	74.653	Ochotona_princeps
ENSCGRG00001016772	-	90	74.161	ENSODEG00000010854	TRUB1	73	82.353	Octodon_degus
ENSCGRG00001016772	-	86	60.305	ENSONIG00000007249	trub1	77	68.545	Oreochromis_niloticus
ENSCGRG00001016772	-	80	75.833	ENSOANG00000001556	TRUB1	79	76.050	Ornithorhynchus_anatinus
ENSCGRG00001016772	-	90	74.161	ENSOCUG00000009456	TRUB1	83	72.917	Oryctolagus_cuniculus
ENSCGRG00001016772	-	70	68.246	ENSORLG00000029719	trub1	75	68.421	Oryzias_latipes
ENSCGRG00001016772	-	70	67.773	ENSORLG00020016767	trub1	74	67.943	Oryzias_latipes_hni
ENSCGRG00001016772	-	70	68.720	ENSORLG00015014728	trub1	75	68.900	Oryzias_latipes_hsok
ENSCGRG00001016772	-	70	67.925	ENSOMEG00000014556	trub1	74	68.095	Oryzias_melastigma
ENSCGRG00001016772	-	90	79.530	ENSOGAG00000015895	TRUB1	73	87.843	Otolemur_garnettii
ENSCGRG00001016772	-	86	85.057	ENSOARG00000015591	TRUB1	73	85.992	Ovis_aries
ENSCGRG00001016772	-	99	70.774	ENSPPAG00000043645	TRUB1	72	87.008	Pan_paniscus
ENSCGRG00001016772	-	90	79.392	ENSPPRG00000007096	TRUB1	72	87.747	Panthera_pardus
ENSCGRG00001016772	-	90	79.730	ENSPTIG00000006378	TRUB1	72	88.142	Panthera_tigris_altaica
ENSCGRG00001016772	-	99	70.774	ENSPTRG00000002964	TRUB1	72	87.008	Pan_troglodytes
ENSCGRG00001016772	-	90	79.461	ENSPANG00000020712	TRUB1	73	87.795	Papio_anubis
ENSCGRG00001016772	-	55	69.461	ENSPKIG00000003852	trub1	72	69.048	Paramormyrops_kingsleyae
ENSCGRG00001016772	-	80	72.500	ENSPSIG00000012877	TRUB1	79	75.000	Pelodiscus_sinensis
ENSCGRG00001016772	-	71	67.290	ENSPMGG00000000075	trub1	76	67.453	Periophthalmus_magnuspinnatus
ENSCGRG00001016772	-	100	77.059	ENSPEMG00000011156	Trub1	75	92.157	Peromyscus_maniculatus_bairdii
ENSCGRG00001016772	-	84	78.740	ENSPCIG00000009729	TRUB1	68	78.968	Phascolarctos_cinereus
ENSCGRG00001016772	-	71	66.355	ENSPFOG00000009950	trub1	78	66.509	Poecilia_formosa
ENSCGRG00001016772	-	71	66.355	ENSPLAG00000013855	trub1	74	66.509	Poecilia_latipinna
ENSCGRG00001016772	-	71	66.355	ENSPMEG00000009064	trub1	77	66.509	Poecilia_mexicana
ENSCGRG00001016772	-	71	67.290	ENSPREG00000003343	trub1	77	67.453	Poecilia_reticulata
ENSCGRG00001016772	-	90	78.451	ENSPPYG00000002676	TRUB1	72	86.614	Pongo_abelii
ENSCGRG00001016772	-	85	75.000	ENSPCAG00000008427	TRUB1	72	75.197	Procavia_capensis
ENSCGRG00001016772	-	90	72.819	ENSPCOG00000024360	TRUB1	72	80.000	Propithecus_coquereli
ENSCGRG00001016772	-	62	79.245	ENSPVAG00000007575	TRUB1	64	91.716	Pteropus_vampyrus
ENSCGRG00001016772	-	90	58.909	ENSPNYG00000018614	trub1	81	66.814	Pundamilia_nyererei
ENSCGRG00001016772	-	59	72.067	ENSPNAG00000006881	trub1	67	72.067	Pygocentrus_nattereri
ENSCGRG00001016772	-	100	75.660	ENSRNOG00000017321	Trub1	75	88.627	Rattus_norvegicus
ENSCGRG00001016772	-	90	68.687	ENSRBIG00000033423	TRUB1	70	75.197	Rhinopithecus_bieti
ENSCGRG00001016772	-	90	79.461	ENSRROG00000033902	TRUB1	73	87.795	Rhinopithecus_roxellana
ENSCGRG00001016772	-	90	79.461	ENSSBOG00000024237	TRUB1	72	87.795	Saimiri_boliviensis_boliviensis
ENSCGRG00001016772	-	99	71.523	ENSSHAG00000009346	TRUB1	86	78.125	Sarcophilus_harrisii
ENSCGRG00001016772	-	70	70.283	ENSSFOG00015022124	trub1	72	70.952	Scleropages_formosus
ENSCGRG00001016772	-	71	67.907	ENSSMAG00000001020	trub1	76	68.075	Scophthalmus_maximus
ENSCGRG00001016772	-	71	68.837	ENSSDUG00000016414	trub1	77	69.014	Seriola_dumerili
ENSCGRG00001016772	-	71	69.302	ENSSLDG00000015486	trub1	77	69.484	Seriola_lalandi_dorsalis
ENSCGRG00001016772	-	80	74.583	ENSSPUG00000001642	TRUB1	82	74.790	Sphenodon_punctatus
ENSCGRG00001016772	-	76	67.105	ENSSPAG00000001217	trub1	80	67.257	Stegastes_partitus
ENSCGRG00001016772	-	90	75.839	ENSSSCG00000010653	TRUB1	73	84.706	Sus_scrofa
ENSCGRG00001016772	-	80	74.583	ENSTGUG00000010971	TRUB1	81	77.093	Taeniopygia_guttata
ENSCGRG00001016772	-	84	73.518	ENSTBEG00000002880	TRUB1	99	73.518	Tupaia_belangeri
ENSCGRG00001016772	-	62	77.358	ENSTTRG00000005767	TRUB1	65	89.941	Tursiops_truncatus
ENSCGRG00001016772	-	90	80.135	ENSUAMG00000024876	TRUB1	73	88.583	Ursus_americanus
ENSCGRG00001016772	-	89	80.000	ENSUMAG00000002411	TRUB1	75	88.189	Ursus_maritimus
ENSCGRG00001016772	-	90	78.523	ENSVPAG00000005507	TRUB1	73	87.059	Vicugna_pacos
ENSCGRG00001016772	-	90	80.068	ENSVVUG00000010085	TRUB1	61	88.189	Vulpes_vulpes
ENSCGRG00001016772	-	80	65.000	ENSXETG00000023828	trub1	86	65.126	Xenopus_tropicalis
ENSCGRG00001016772	-	70	65.094	ENSXCOG00000017847	trub1	74	65.238	Xiphophorus_couchianus
ENSCGRG00001016772	-	71	64.953	ENSXMAG00000014701	trub1	77	65.094	Xiphophorus_maculatus