EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00001016833 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Minus strand
Length: 20020 bases
Position: chrscaffold_15:37398992-37419011
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001016593	CSD	PF00313.22	1.1e-85	1	5
ENSCGRP00001016593	CSD	PF00313.22	1.1e-85	2	5
ENSCGRP00001016593	CSD	PF00313.22	1.1e-85	3	5
ENSCGRP00001016593	CSD	PF00313.22	1.1e-85	4	5
ENSCGRP00001016593	CSD	PF00313.22	1.1e-85	5	5
ENSCGRP00001016585	CSD	PF00313.22	1.8e-85	1	5
ENSCGRP00001016585	CSD	PF00313.22	1.8e-85	2	5
ENSCGRP00001016585	CSD	PF00313.22	1.8e-85	3	5
ENSCGRP00001016585	CSD	PF00313.22	1.8e-85	4	5
ENSCGRP00001016585	CSD	PF00313.22	1.8e-85	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001020829	-	3729	-	ENSCGRP00001016585	798 (aa)	-	UPI000359BDEF
ENSCGRT00001020837	-	2304	-	ENSCGRP00001016593	767 (aa)	-	UPI0003597EBA

Gene Model

Click here to download ENSCGRG00001016833's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001016833's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00001016833	-	100	82.790	ENSCGRG00001014011	-	100	82.790

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001016833	-	100	98.622	ENSG00000009307	CSDE1	100	100.000	Homo_sapiens
ENSCGRG00001016833	-	100	77.013	ENSAPOG00000015538	csde1	100	77.013	Acanthochromis_polyacanthus
ENSCGRG00001016833	-	100	97.523	ENSAMEG00000017129	CSDE1	94	97.523	Ailuropoda_melanoleuca
ENSCGRG00001016833	-	91	76.757	ENSACIG00000015175	csde1	100	76.757	Amphilophus_citrinellus
ENSCGRG00001016833	-	100	77.143	ENSAOCG00000011510	csde1	100	77.143	Amphiprion_ocellaris
ENSCGRG00001016833	-	100	77.143	ENSAPEG00000007194	csde1	100	77.143	Amphiprion_percula
ENSCGRG00001016833	-	100	76.753	ENSATEG00000003864	csde1	100	76.753	Anabas_testudineus
ENSCGRG00001016833	-	100	91.265	ENSAPLG00000008797	CSDE1	100	91.265	Anas_platyrhynchos
ENSCGRG00001016833	-	100	91.729	ENSACAG00000003120	CSDE1	100	91.729	Anolis_carolinensis
ENSCGRG00001016833	-	93	73.050	ENSANAG00000028396	-	91	73.810	Aotus_nancymaae
ENSCGRG00001016833	-	100	98.305	ENSANAG00000024665	CSDE1	95	98.305	Aotus_nancymaae
ENSCGRG00001016833	-	100	76.723	ENSACLG00000013296	csde1	100	76.723	Astatotilapia_calliptera
ENSCGRG00001016833	-	100	76.394	ENSAMXG00000007436	csde1	100	76.394	Astyanax_mexicanus
ENSCGRG00001016833	-	100	98.120	ENSBTAG00000000678	CSDE1	100	98.044	Bos_taurus
ENSCGRG00001016833	-	100	98.371	ENSCJAG00000012565	CSDE1	95	98.371	Callithrix_jacchus
ENSCGRG00001016833	-	98	98.404	ENSCAFG00000009618	CSDE1	94	98.404	Canis_familiaris
ENSCGRG00001016833	-	100	98.435	ENSCAFG00020000481	CSDE1	100	98.435	Canis_lupus_dingo
ENSCGRG00001016833	-	100	98.120	ENSCHIG00000017250	CSDE1	100	98.044	Capra_hircus
ENSCGRG00001016833	-	100	98.496	ENSTSYG00000003747	CSDE1	100	98.496	Carlito_syrichta
ENSCGRG00001016833	-	100	92.398	ENSCAPG00000015128	CSDE1	100	92.398	Cavia_aperea
ENSCGRG00001016833	-	100	93.484	ENSCPOG00000040388	CSDE1	100	93.484	Cavia_porcellus
ENSCGRG00001016833	-	97	73.497	ENSCCAG00000030878	-	91	73.497	Cebus_capucinus
ENSCGRG00001016833	-	95	75.990	ENSCCAG00000033677	-	99	75.772	Cebus_capucinus
ENSCGRG00001016833	-	100	98.371	ENSCCAG00000036794	CSDE1	100	98.371	Cebus_capucinus
ENSCGRG00001016833	-	100	98.622	ENSCATG00000036962	CSDE1	98	98.575	Cercocebus_atys
ENSCGRG00001016833	-	100	98.622	ENSCLAG00000006618	CSDE1	100	98.622	Chinchilla_lanigera
ENSCGRG00001016833	-	100	98.622	ENSCSAG00000001658	CSDE1	95	98.622	Chlorocebus_sabaeus
ENSCGRG00001016833	-	100	99.387	ENSCHOG00000000918	CSDE1	85	99.387	Choloepus_hoffmanni
ENSCGRG00001016833	-	100	91.855	ENSCPBG00000016547	CSDE1	100	91.855	Chrysemys_picta_bellii
ENSCGRG00001016833	-	97	42.665	ENSCING00000014465	-	96	42.665	Ciona_intestinalis
ENSCGRG00001016833	-	96	42.131	ENSCSAVG00000008100	-	98	42.131	Ciona_savignyi
ENSCGRG00001016833	-	99	93.053	ENSCANG00000031069	-	100	93.053	Colobus_angolensis_palliatus
ENSCGRG00001016833	-	100	98.622	ENSCANG00000035096	CSDE1	98	98.575	Colobus_angolensis_palliatus
ENSCGRG00001016833	-	97	100.000	ENSCGRG00000002225	-	100	100.000	Cricetulus_griseus_crigri
ENSCGRG00001016833	-	100	86.522	ENSCGRG00000005831	-	100	86.522	Cricetulus_griseus_crigri
ENSCGRG00001016833	-	100	76.593	ENSCSEG00000002620	csde1	100	76.593	Cynoglossus_semilaevis
ENSCGRG00001016833	-	100	76.104	ENSCVAG00000001344	csde1	100	76.104	Cyprinodon_variegatus
ENSCGRG00001016833	-	100	77.278	ENSDARG00000074758	csde1	100	77.278	Danio_rerio
ENSCGRG00001016833	-	80	69.582	ENSDNOG00000034464	-	100	71.304	Dasypus_novemcinctus
ENSCGRG00001016833	-	100	98.177	ENSDNOG00000010287	-	93	98.177	Dasypus_novemcinctus
ENSCGRG00001016833	-	100	98.496	ENSDORG00000011609	Csde1	100	98.496	Dipodomys_ordii
ENSCGRG00001016833	-	97	48.156	FBgn0263352	Unr	81	48.795	Drosophila_melanogaster
ENSCGRG00001016833	-	90	86.709	ENSETEG00000006280	-	100	86.709	Echinops_telfairi
ENSCGRG00001016833	-	99	76.240	ENSETEG00000013678	-	99	76.240	Echinops_telfairi
ENSCGRG00001016833	-	79	68.046	ENSETEG00000007109	-	99	68.046	Echinops_telfairi
ENSCGRG00001016833	-	93	98.347	ENSETEG00000002491	-	74	98.347	Echinops_telfairi
ENSCGRG00001016833	-	99	55.528	ENSEBUG00000008647	csde1	99	53.810	Eptatretus_burgeri
ENSCGRG00001016833	-	100	98.496	ENSEASG00005006284	CSDE1	100	98.496	Equus_asinus_asinus
ENSCGRG00001016833	-	100	98.496	ENSECAG00000020885	CSDE1	100	98.496	Equus_caballus
ENSCGRG00001016833	-	92	97.906	ENSEEUG00000006286	CSDE1	68	97.906	Erinaceus_europaeus
ENSCGRG00001016833	-	100	75.162	ENSELUG00000015507	csde1	100	75.162	Esox_lucius
ENSCGRG00001016833	-	100	98.747	ENSFCAG00000029266	CSDE1	100	98.696	Felis_catus
ENSCGRG00001016833	-	100	91.604	ENSFALG00000003407	CSDE1	100	91.604	Ficedula_albicollis
ENSCGRG00001016833	-	100	98.622	ENSFDAG00000007882	CSDE1	100	98.622	Fukomys_damarensis
ENSCGRG00001016833	-	100	76.155	ENSFHEG00000010799	csde1	100	76.155	Fundulus_heteroclitus
ENSCGRG00001016833	-	99	76.471	ENSGMOG00000012731	csde1	100	76.471	Gadus_morhua
ENSCGRG00001016833	-	98	91.560	ENSGALG00000002139	CSDE1	98	91.560	Gallus_gallus
ENSCGRG00001016833	-	92	75.762	ENSGAFG00000005241	csde1	95	75.762	Gambusia_affinis
ENSCGRG00001016833	-	99	76.875	ENSGACG00000004544	csde1	100	76.875	Gasterosteus_aculeatus
ENSCGRG00001016833	-	100	91.479	ENSGAGG00000017685	CSDE1	100	91.479	Gopherus_agassizii
ENSCGRG00001016833	-	100	98.622	ENSGGOG00000002164	CSDE1	100	98.566	Gorilla_gorilla
ENSCGRG00001016833	-	100	76.723	ENSHBUG00000020315	csde1	100	76.723	Haplochromis_burtoni
ENSCGRG00001016833	-	99	80.176	ENSHGLG00000000650	-	99	80.176	Heterocephalus_glaber_female
ENSCGRG00001016833	-	99	89.072	ENSHGLG00000008555	-	100	89.072	Heterocephalus_glaber_female
ENSCGRG00001016833	-	100	89.223	ENSHGLG00000009620	-	100	89.474	Heterocephalus_glaber_female
ENSCGRG00001016833	-	99	85.151	ENSHGLG00000007471	-	98	85.151	Heterocephalus_glaber_female
ENSCGRG00001016833	-	99	89.310	ENSHGLG00000010039	-	100	89.310	Heterocephalus_glaber_female
ENSCGRG00001016833	-	100	82.456	ENSHGLG00000019549	-	100	82.456	Heterocephalus_glaber_female
ENSCGRG00001016833	-	100	89.179	ENSHGLG00000003829	-	100	89.179	Heterocephalus_glaber_female
ENSCGRG00001016833	-	93	84.100	ENSHGLG00100004195	-	100	84.100	Heterocephalus_glaber_male
ENSCGRG00001016833	-	99	89.087	ENSHGLG00100006910	-	100	89.087	Heterocephalus_glaber_male
ENSCGRG00001016833	-	99	84.481	ENSHGLG00100002245	-	99	84.481	Heterocephalus_glaber_male
ENSCGRG00001016833	-	100	80.339	ENSHGLG00100001846	-	100	80.339	Heterocephalus_glaber_male
ENSCGRG00001016833	-	100	84.355	ENSHGLG00100012072	-	100	84.355	Heterocephalus_glaber_male
ENSCGRG00001016833	-	99	82.654	ENSHGLG00100007287	-	98	82.654	Heterocephalus_glaber_male
ENSCGRG00001016833	-	100	98.872	ENSHGLG00100019438	-	100	98.872	Heterocephalus_glaber_male
ENSCGRG00001016833	-	99	81.960	ENSHGLG00100004833	-	100	81.960	Heterocephalus_glaber_male
ENSCGRG00001016833	-	100	75.813	ENSHCOG00000004158	csde1	100	75.813	Hippocampus_comes
ENSCGRG00001016833	-	100	76.135	ENSIPUG00000000355	csde1	100	76.135	Ictalurus_punctatus
ENSCGRG00001016833	-	100	80.818	ENSSTOG00000030994	-	100	80.818	Ictidomys_tridecemlineatus
ENSCGRG00001016833	-	86	82.863	ENSSTOG00000032722	-	98	82.863	Ictidomys_tridecemlineatus
ENSCGRG00001016833	-	100	98.997	ENSJJAG00000019571	Csde1	100	98.997	Jaculus_jaculus
ENSCGRG00001016833	-	100	76.025	ENSKMAG00000005685	csde1	100	75.773	Kryptolebias_marmoratus
ENSCGRG00001016833	-	100	77.013	ENSLBEG00000014770	csde1	100	77.013	Labrus_bergylta
ENSCGRG00001016833	-	100	79.404	ENSLACG00000018452	CSDE1	94	79.404	Latimeria_chalumnae
ENSCGRG00001016833	-	100	79.474	ENSLOCG00000010413	csde1	94	79.474	Lepisosteus_oculatus
ENSCGRG00001016833	-	100	97.001	ENSLAFG00000007150	CSDE1	96	97.001	Loxodonta_africana
ENSCGRG00001016833	-	100	98.622	ENSMFAG00000003674	CSDE1	100	98.566	Macaca_fascicularis
ENSCGRG00001016833	-	100	98.622	ENSMMUG00000001974	CSDE1	100	98.566	Macaca_mulatta
ENSCGRG00001016833	-	100	98.622	ENSMNEG00000045247	CSDE1	98	98.575	Macaca_nemestrina
ENSCGRG00001016833	-	100	98.371	ENSMLEG00000038673	CSDE1	95	98.371	Mandrillus_leucophaeus
ENSCGRG00001016833	-	100	77.662	ENSMAMG00000008821	csde1	100	77.662	Mastacembelus_armatus
ENSCGRG00001016833	-	100	76.723	ENSMZEG00005021675	csde1	100	76.723	Maylandia_zebra
ENSCGRG00001016833	-	100	91.016	ENSMGAG00000016381	CSDE1	100	91.016	Meleagris_gallopavo
ENSCGRG00001016833	-	100	100.000	ENSMAUG00000014031	Csde1	100	100.000	Mesocricetus_auratus
ENSCGRG00001016833	-	100	97.914	ENSMICG00000002050	CSDE1	99	98.214	Microcebus_murinus
ENSCGRG00001016833	-	100	99.749	ENSMOCG00000018960	Csde1	100	99.749	Microtus_ochrogaster
ENSCGRG00001016833	-	100	77.273	ENSMMOG00000015075	csde1	100	77.273	Mola_mola
ENSCGRG00001016833	-	100	95.363	ENSMODG00000004685	CSDE1	100	95.363	Monodelphis_domestica
ENSCGRG00001016833	-	100	77.143	ENSMALG00000007132	csde1	100	77.143	Monopterus_albus
ENSCGRG00001016833	-	100	99.749	MGP_CAROLIEiJ_G0025444	Csde1	100	99.749	Mus_caroli
ENSCGRG00001016833	-	100	99.624	ENSMUSG00000068823	Csde1	100	99.624	Mus_musculus
ENSCGRG00001016833	-	100	99.875	MGP_PahariEiJ_G0026888	Csde1	100	99.875	Mus_pahari
ENSCGRG00001016833	-	100	99.875	MGP_SPRETEiJ_G0026394	Csde1	100	99.875	Mus_spretus
ENSCGRG00001016833	-	98	98.723	ENSMPUG00000005753	CSDE1	99	98.723	Mustela_putorius_furo
ENSCGRG00001016833	-	100	97.653	ENSMLUG00000005681	CSDE1	94	97.653	Myotis_lucifugus
ENSCGRG00001016833	-	97	71.047	ENSNGAG00000012599	-	100	71.047	Nannospalax_galili
ENSCGRG00001016833	-	100	99.373	ENSNGAG00000021929	Csde1	100	99.373	Nannospalax_galili
ENSCGRG00001016833	-	100	76.723	ENSNBRG00000020808	csde1	100	76.723	Neolamprologus_brichardi
ENSCGRG00001016833	-	100	98.496	ENSNLEG00000004842	CSDE1	97	98.435	Nomascus_leucogenys
ENSCGRG00001016833	-	98	96.117	ENSMEUG00000002677	CSDE1	96	96.117	Notamacropus_eugenii
ENSCGRG00001016833	-	98	97.087	ENSOPRG00000005002	CSDE1	82	93.849	Ochotona_princeps
ENSCGRG00001016833	-	100	98.246	ENSODEG00000007383	-	100	98.246	Octodon_degus
ENSCGRG00001016833	-	97	67.699	ENSODEG00000005979	-	98	67.699	Octodon_degus
ENSCGRG00001016833	-	100	74.603	ENSONIG00000009309	csde1	100	74.603	Oreochromis_niloticus
ENSCGRG00001016833	-	100	79.426	ENSOANG00000003346	-	100	79.426	Ornithorhynchus_anatinus
ENSCGRG00001016833	-	100	97.870	ENSOCUG00000016438	CSDE1	95	97.870	Oryctolagus_cuniculus
ENSCGRG00001016833	-	100	76.983	ENSORLG00000000707	csde1	100	76.983	Oryzias_latipes
ENSCGRG00001016833	-	100	76.500	ENSORLG00020005148	csde1	100	74.725	Oryzias_latipes_hni
ENSCGRG00001016833	-	100	76.983	ENSORLG00015019415	csde1	100	76.983	Oryzias_latipes_hsok
ENSCGRG00001016833	-	100	77.532	ENSOMEG00000015656	csde1	100	77.532	Oryzias_melastigma
ENSCGRG00001016833	-	100	98.696	ENSOGAG00000012127	CSDE1	94	98.696	Otolemur_garnettii
ENSCGRG00001016833	-	100	98.175	ENSOARG00000020034	CSDE1	94	98.175	Ovis_aries
ENSCGRG00001016833	-	100	98.622	ENSPPAG00000025861	CSDE1	100	98.566	Pan_paniscus
ENSCGRG00001016833	-	100	98.747	ENSPPRG00000006747	CSDE1	95	98.747	Panthera_pardus
ENSCGRG00001016833	-	100	98.747	ENSPTIG00000015468	CSDE1	100	98.747	Panthera_tigris_altaica
ENSCGRG00001016833	-	100	98.622	ENSPTRG00000033721	CSDE1	100	98.622	Pan_troglodytes
ENSCGRG00001016833	-	100	98.622	ENSPANG00000018873	CSDE1	100	98.566	Papio_anubis
ENSCGRG00001016833	-	100	76.723	ENSPKIG00000009459	csde1	100	76.723	Paramormyrops_kingsleyae
ENSCGRG00001016833	-	96	94.912	ENSPSIG00000003823	CSDE1	96	94.912	Pelodiscus_sinensis
ENSCGRG00001016833	-	100	77.013	ENSPMGG00000000772	csde1	100	77.013	Periophthalmus_magnuspinnatus
ENSCGRG00001016833	-	100	99.749	ENSPEMG00000020357	-	100	99.749	Peromyscus_maniculatus_bairdii
ENSCGRG00001016833	-	100	95.489	ENSPCIG00000022587	CSDE1	100	95.489	Phascolarctos_cinereus
ENSCGRG00001016833	-	99	74.845	ENSPFOG00000012664	csde1	100	75.466	Poecilia_formosa
ENSCGRG00001016833	-	97	70.661	ENSPLAG00000017680	csde1	93	70.661	Poecilia_latipinna
ENSCGRG00001016833	-	98	70.561	ENSPMEG00000005094	csde1	96	70.561	Poecilia_mexicana
ENSCGRG00001016833	-	100	75.528	ENSPREG00000011631	csde1	100	73.469	Poecilia_reticulata
ENSCGRG00001016833	-	100	98.496	ENSPPYG00000000996	CSDE1	100	98.496	Pongo_abelii
ENSCGRG00001016833	-	100	98.098	ENSPCAG00000014368	CSDE1	90	98.098	Procavia_capensis
ENSCGRG00001016833	-	100	98.566	ENSPCOG00000017893	CSDE1	100	98.566	Propithecus_coquereli
ENSCGRG00001016833	-	90	84.328	ENSPCOG00000008223	-	92	82.847	Propithecus_coquereli
ENSCGRG00001016833	-	100	92.568	ENSPVAG00000008225	CSDE1	95	92.568	Pteropus_vampyrus
ENSCGRG00001016833	-	100	76.723	ENSPNYG00000013745	csde1	100	76.723	Pundamilia_nyererei
ENSCGRG00001016833	-	100	76.883	ENSPNAG00000001958	csde1	100	76.883	Pygocentrus_nattereri
ENSCGRG00001016833	-	100	99.749	ENSRNOG00000061058	Csde1	100	99.749	Rattus_norvegicus
ENSCGRG00001016833	-	100	94.922	ENSRBIG00000038088	-	99	97.005	Rhinopithecus_bieti
ENSCGRG00001016833	-	100	92.848	ENSRBIG00000038966	-	94	92.848	Rhinopithecus_bieti
ENSCGRG00001016833	-	100	98.622	ENSRROG00000043101	CSDE1	98	98.341	Rhinopithecus_roxellana
ENSCGRG00001016833	-	100	98.371	ENSSBOG00000035592	CSDE1	95	98.371	Saimiri_boliviensis_boliviensis
ENSCGRG00001016833	-	100	95.176	ENSSHAG00000009831	CSDE1	100	95.176	Sarcophilus_harrisii
ENSCGRG00001016833	-	100	76.723	ENSSFOG00015007498	csde1	100	76.723	Scleropages_formosus
ENSCGRG00001016833	-	100	77.662	ENSSMAG00000007203	csde1	100	77.662	Scophthalmus_maximus
ENSCGRG00001016833	-	100	77.143	ENSSDUG00000015380	csde1	100	77.143	Seriola_dumerili
ENSCGRG00001016833	-	100	77.143	ENSSLDG00000008819	csde1	100	77.143	Seriola_lalandi_dorsalis
ENSCGRG00001016833	-	100	97.523	ENSSARG00000000738	CSDE1	94	97.523	Sorex_araneus
ENSCGRG00001016833	-	100	91.228	ENSSPUG00000008714	CSDE1	100	91.228	Sphenodon_punctatus
ENSCGRG00001016833	-	100	77.013	ENSSPAG00000000716	csde1	100	77.013	Stegastes_partitus
ENSCGRG00001016833	-	100	98.496	ENSSSCG00000006752	CSDE1	100	98.435	Sus_scrofa
ENSCGRG00001016833	-	100	90.625	ENSTGUG00000000972	CSDE1	100	90.625	Taeniopygia_guttata
ENSCGRG00001016833	-	100	74.122	ENSTRUG00000007996	csde1	100	74.122	Takifugu_rubripes
ENSCGRG00001016833	-	93	80.608	ENSTNIG00000010878	csde1	100	80.608	Tetraodon_nigroviridis
ENSCGRG00001016833	-	93	98.718	ENSTBEG00000011880	-	62	98.773	Tupaia_belangeri
ENSCGRG00001016833	-	100	97.653	ENSTTRG00000015583	CSDE1	94	97.653	Tursiops_truncatus
ENSCGRG00001016833	-	89	93.881	ENSUAMG00000024289	-	99	93.881	Ursus_americanus
ENSCGRG00001016833	-	89	99.349	ENSUAMG00000021779	-	100	98.714	Ursus_americanus
ENSCGRG00001016833	-	97	98.575	ENSUMAG00000011714	-	99	98.575	Ursus_maritimus
ENSCGRG00001016833	-	100	90.874	ENSUMAG00000009720	-	97	90.874	Ursus_maritimus
ENSCGRG00001016833	-	100	97.664	ENSVPAG00000000749	CSDE1	79	97.664	Vicugna_pacos
ENSCGRG00001016833	-	90	98.392	ENSVVUG00000009890	CSDE1	94	98.392	Vulpes_vulpes
ENSCGRG00001016833	-	100	85.144	ENSXETG00000021448	csde1	100	85.144	Xenopus_tropicalis
ENSCGRG00001016833	-	92	85.455	ENSXCOG00000000035	csde1	85	85.455	Xiphophorus_couchianus
ENSCGRG00001016833	-	100	76.750	ENSXMAG00000009080	csde1	98	77.056	Xiphophorus_maculatus