EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00001016995 (Gene tree)
Gene ID: -
Gene Symbol: Hfm1
Alias: A330009G12Rik|LOC381663|Mer3|Sec63d1
Full Name: HFM1%2C ATP-dependent DNA helicase homolog
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Minus strand
Length: 79976 bases
Position: chrscaffold_4:1576285-1656260
Accession: 3036246
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001016802	ResIII	PF04851.15	6.8e-10	1	1
ENSCGRP00001016802	DEAD	PF00270.29	7.2e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001021046	-	4200	-	ENSCGRP00001016802	1399 (aa)	-	-

Gene Model

Click here to download ENSCGRG00001016995's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001016995's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00001016995	Hfm1	50	35.962	ENSCGRG00001000918	Ascc3	59	35.962
ENSCGRG00001016995	Hfm1	57	31.882	ENSCGRG00001022610	Snrnp200	72	31.882

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001016995	Hfm1	100	73.946	ENSG00000162669	HFM1	100	73.946	Homo_sapiens
ENSCGRG00001016995	Hfm1	57	63.354	ENSAPOG00000005304	hfm1	90	63.354	Acanthochromis_polyacanthus
ENSCGRG00001016995	Hfm1	100	72.928	ENSAMEG00000000432	HFM1	100	72.928	Ailuropoda_melanoleuca
ENSCGRG00001016995	Hfm1	70	56.121	ENSACIG00000021553	hfm1	89	56.428	Amphilophus_citrinellus
ENSCGRG00001016995	Hfm1	56	64.831	ENSAOCG00000022839	hfm1	96	64.831	Amphiprion_ocellaris
ENSCGRG00001016995	Hfm1	56	65.119	ENSAPEG00000014316	hfm1	96	65.119	Amphiprion_percula
ENSCGRG00001016995	Hfm1	67	60.379	ENSATEG00000019181	hfm1	80	60.022	Anabas_testudineus
ENSCGRG00001016995	Hfm1	100	54.942	ENSAPLG00000013639	HFM1	100	54.942	Anas_platyrhynchos
ENSCGRG00001016995	Hfm1	100	72.149	ENSANAG00000029513	HFM1	100	72.149	Aotus_nancymaae
ENSCGRG00001016995	Hfm1	65	59.626	ENSACLG00000009033	hfm1	92	61.673	Astatotilapia_calliptera
ENSCGRG00001016995	Hfm1	73	58.700	ENSAMXG00000006108	hfm1	71	58.683	Astyanax_mexicanus
ENSCGRG00001016995	Hfm1	100	72.230	ENSBTAG00000020856	HFM1	100	72.230	Bos_taurus
ENSCGRG00001016995	Hfm1	100	73.010	ENSCJAG00000001843	HFM1	100	73.010	Callithrix_jacchus
ENSCGRG00001016995	Hfm1	100	72.099	ENSCAFG00000020187	HFM1	100	72.099	Canis_familiaris
ENSCGRG00001016995	Hfm1	100	72.878	ENSTSYG00000014250	HFM1	100	72.878	Carlito_syrichta
ENSCGRG00001016995	Hfm1	99	70.250	ENSCPOG00000007421	HFM1	99	70.250	Cavia_porcellus
ENSCGRG00001016995	Hfm1	100	72.526	ENSCCAG00000033206	HFM1	100	72.526	Cebus_capucinus
ENSCGRG00001016995	Hfm1	100	73.462	ENSCATG00000030987	HFM1	100	73.462	Cercocebus_atys
ENSCGRG00001016995	Hfm1	100	70.719	ENSCLAG00000005173	HFM1	99	70.719	Chinchilla_lanigera
ENSCGRG00001016995	Hfm1	66	88.158	ENSCHOG00000011824	-	76	88.158	Choloepus_hoffmanni
ENSCGRG00001016995	Hfm1	50	50.829	ENSCSAVG00000005094	-	99	50.829	Ciona_savignyi
ENSCGRG00001016995	Hfm1	100	95.404	ENSCGRG00000017181	Hfm1	100	95.404	Cricetulus_griseus_crigri
ENSCGRG00001016995	Hfm1	71	54.942	ENSCSEG00000017659	hfm1	91	55.005	Cynoglossus_semilaevis
ENSCGRG00001016995	Hfm1	51	63.939	ENSCVAG00000005075	hfm1	86	63.939	Cyprinodon_variegatus
ENSCGRG00001016995	Hfm1	76	52.166	ENSDARG00000104288	hfm1	96	52.166	Danio_rerio
ENSCGRG00001016995	Hfm1	100	69.571	ENSDNOG00000004776	HFM1	100	69.571	Dasypus_novemcinctus
ENSCGRG00001016995	Hfm1	100	70.198	ENSDORG00000014661	Hfm1	100	70.198	Dipodomys_ordii
ENSCGRG00001016995	Hfm1	71	78.239	ENSEASG00005015424	HFM1	96	78.239	Equus_asinus_asinus
ENSCGRG00001016995	Hfm1	100	70.950	ENSECAG00000024039	HFM1	100	70.950	Equus_caballus
ENSCGRG00001016995	Hfm1	62	62.613	ENSELUG00000018944	hfm1	94	62.613	Esox_lucius
ENSCGRG00001016995	Hfm1	100	73.481	ENSFCAG00000029116	HFM1	100	73.481	Felis_catus
ENSCGRG00001016995	Hfm1	100	54.340	ENSFALG00000001781	HFM1	100	54.433	Ficedula_albicollis
ENSCGRG00001016995	Hfm1	100	69.385	ENSFDAG00000020816	HFM1	100	69.385	Fukomys_damarensis
ENSCGRG00001016995	Hfm1	66	56.342	ENSGMOG00000017436	hfm1	97	56.522	Gadus_morhua
ENSCGRG00001016995	Hfm1	70	58.052	ENSGAFG00000018093	hfm1	94	57.968	Gambusia_affinis
ENSCGRG00001016995	Hfm1	66	57.550	ENSGACG00000015686	hfm1	96	57.766	Gasterosteus_aculeatus
ENSCGRG00001016995	Hfm1	100	73.808	ENSGGOG00000038524	HFM1	100	73.808	Gorilla_gorilla
ENSCGRG00001016995	Hfm1	65	60.726	ENSHBUG00000007309	hfm1	92	57.472	Haplochromis_burtoni
ENSCGRG00001016995	Hfm1	56	60.025	ENSHCOG00000019632	hfm1	94	60.025	Hippocampus_comes
ENSCGRG00001016995	Hfm1	69	59.388	ENSIPUG00000017020	hfm1	88	63.636	Ictalurus_punctatus
ENSCGRG00001016995	Hfm1	100	72.373	ENSJJAG00000017198	Hfm1	100	72.373	Jaculus_jaculus
ENSCGRG00001016995	Hfm1	62	59.209	ENSKMAG00000002282	hfm1	88	59.209	Kryptolebias_marmoratus
ENSCGRG00001016995	Hfm1	70	55.744	ENSLBEG00000006759	hfm1	92	61.644	Labrus_bergylta
ENSCGRG00001016995	Hfm1	66	64.458	ENSLACG00000010698	HFM1	98	61.340	Latimeria_chalumnae
ENSCGRG00001016995	Hfm1	70	61.461	ENSLOCG00000004931	hfm1	92	61.361	Lepisosteus_oculatus
ENSCGRG00001016995	Hfm1	51	76.494	ENSLAFG00000015903	-	100	76.494	Loxodonta_africana
ENSCGRG00001016995	Hfm1	100	72.834	ENSMFAG00000003649	HFM1	100	72.834	Macaca_fascicularis
ENSCGRG00001016995	Hfm1	100	73.393	ENSMMUG00000006819	HFM1	100	73.393	Macaca_mulatta
ENSCGRG00001016995	Hfm1	55	64.789	ENSMAMG00000004623	hfm1	94	62.687	Mastacembelus_armatus
ENSCGRG00001016995	Hfm1	65	59.626	ENSMZEG00005004679	hfm1	92	61.673	Maylandia_zebra
ENSCGRG00001016995	Hfm1	55	72.797	ENSMGAG00000008437	HFM1	96	72.797	Meleagris_gallopavo
ENSCGRG00001016995	Hfm1	100	88.219	ENSMAUG00000018858	Hfm1	100	88.219	Mesocricetus_auratus
ENSCGRG00001016995	Hfm1	100	72.859	ENSMICG00000037935	HFM1	100	72.859	Microcebus_murinus
ENSCGRG00001016995	Hfm1	100	82.451	ENSMOCG00000014812	Hfm1	100	82.451	Microtus_ochrogaster
ENSCGRG00001016995	Hfm1	62	60.000	ENSMMOG00000006148	hfm1	91	60.000	Mola_mola
ENSCGRG00001016995	Hfm1	65	59.718	ENSMALG00000002401	hfm1	91	63.184	Monopterus_albus
ENSCGRG00001016995	Hfm1	100	68.750	MGP_CAROLIEiJ_G0027496	Hfm1	100	68.797	Mus_caroli
ENSCGRG00001016995	Hfm1	100	80.609	ENSMUSG00000043410	Hfm1	100	80.609	Mus_musculus
ENSCGRG00001016995	Hfm1	100	80.263	MGP_PahariEiJ_G0017268	Hfm1	100	80.332	Mus_pahari
ENSCGRG00001016995	Hfm1	100	80.679	MGP_SPRETEiJ_G0028495	Hfm1	100	80.679	Mus_spretus
ENSCGRG00001016995	Hfm1	100	70.214	ENSMPUG00000004594	HFM1	100	70.214	Mustela_putorius_furo
ENSCGRG00001016995	Hfm1	100	70.503	ENSMLUG00000010200	HFM1	100	70.503	Myotis_lucifugus
ENSCGRG00001016995	Hfm1	70	53.407	ENSNBRG00000002910	hfm1	94	61.423	Neolamprologus_brichardi
ENSCGRG00001016995	Hfm1	100	70.661	ENSNLEG00000010285	HFM1	100	70.661	Nomascus_leucogenys
ENSCGRG00001016995	Hfm1	83	64.470	ENSMEUG00000015788	HFM1	84	64.470	Notamacropus_eugenii
ENSCGRG00001016995	Hfm1	84	70.093	ENSOPRG00000013916	HFM1	84	70.093	Ochotona_princeps
ENSCGRG00001016995	Hfm1	70	58.544	ENSONIG00000010590	hfm1	95	58.442	Oreochromis_niloticus
ENSCGRG00001016995	Hfm1	56	61.315	ENSORLG00000026844	hfm1	97	61.315	Oryzias_latipes
ENSCGRG00001016995	Hfm1	66	53.355	ENSORLG00020002951	hfm1	73	53.355	Oryzias_latipes_hni
ENSCGRG00001016995	Hfm1	66	58.966	ENSOMEG00000016474	hfm1	64	59.236	Oryzias_melastigma
ENSCGRG00001016995	Hfm1	85	74.191	ENSOGAG00000032369	HFM1	99	74.207	Otolemur_garnettii
ENSCGRG00001016995	Hfm1	100	71.862	ENSOARG00000015812	HFM1	100	71.862	Ovis_aries
ENSCGRG00001016995	Hfm1	92	75.075	ENSPPAG00000024582	HFM1	100	75.075	Pan_paniscus
ENSCGRG00001016995	Hfm1	100	73.430	ENSPPRG00000003270	HFM1	100	73.430	Panthera_pardus
ENSCGRG00001016995	Hfm1	100	73.292	ENSPTIG00000018881	HFM1	100	73.292	Panthera_tigris_altaica
ENSCGRG00001016995	Hfm1	100	74.015	ENSPTRG00000000948	HFM1	100	74.015	Pan_troglodytes
ENSCGRG00001016995	Hfm1	100	73.531	ENSPANG00000009838	HFM1	100	73.531	Papio_anubis
ENSCGRG00001016995	Hfm1	71	57.400	ENSPKIG00000003810	hfm1	91	64.512	Paramormyrops_kingsleyae
ENSCGRG00001016995	Hfm1	57	61.757	ENSPMGG00000011059	hfm1	97	61.757	Periophthalmus_magnuspinnatus
ENSCGRG00001016995	Hfm1	100	85.576	ENSPEMG00000022852	Hfm1	100	85.576	Peromyscus_maniculatus_bairdii
ENSCGRG00001016995	Hfm1	100	60.576	ENSPCIG00000014233	HFM1	100	60.576	Phascolarctos_cinereus
ENSCGRG00001016995	Hfm1	70	58.967	ENSPFOG00000017194	hfm1	97	58.892	Poecilia_formosa
ENSCGRG00001016995	Hfm1	74	58.080	ENSPLAG00000000571	hfm1	92	58.080	Poecilia_latipinna
ENSCGRG00001016995	Hfm1	70	60.060	ENSPMEG00000019475	hfm1	90	60.060	Poecilia_mexicana
ENSCGRG00001016995	Hfm1	74	57.645	ENSPREG00000007803	hfm1	94	57.550	Poecilia_reticulata
ENSCGRG00001016995	Hfm1	100	73.670	ENSPPYG00000001163	HFM1	100	73.670	Pongo_abelii
ENSCGRG00001016995	Hfm1	70	74.138	ENSPCAG00000004289	-	70	74.138	Procavia_capensis
ENSCGRG00001016995	Hfm1	100	66.158	ENSPVAG00000009713	HFM1	100	66.158	Pteropus_vampyrus
ENSCGRG00001016995	Hfm1	65	59.516	ENSPNYG00000001795	hfm1	92	61.673	Pundamilia_nyererei
ENSCGRG00001016995	Hfm1	58	64.640	ENSPNAG00000010865	hfm1	80	64.640	Pygocentrus_nattereri
ENSCGRG00001016995	Hfm1	100	80.681	ENSRNOG00000023299	Hfm1	100	80.681	Rattus_norvegicus
ENSCGRG00001016995	Hfm1	100	73.601	ENSRROG00000045569	HFM1	100	73.601	Rhinopithecus_roxellana
ENSCGRG00001016995	Hfm1	100	70.914	ENSSBOG00000027456	HFM1	100	70.914	Saimiri_boliviensis_boliviensis
ENSCGRG00001016995	Hfm1	59	61.785	ENSSHAG00000014616	-	98	61.785	Sarcophilus_harrisii
ENSCGRG00001016995	Hfm1	67	61.192	ENSSFOG00015020129	hfm1	63	61.416	Scleropages_formosus
ENSCGRG00001016995	Hfm1	62	61.959	ENSSMAG00000006907	hfm1	84	61.959	Scophthalmus_maximus
ENSCGRG00001016995	Hfm1	57	62.594	ENSSDUG00000011424	hfm1	90	62.594	Seriola_dumerili
ENSCGRG00001016995	Hfm1	57	62.765	ENSSLDG00000016386	hfm1	89	62.765	Seriola_lalandi_dorsalis
ENSCGRG00001016995	Hfm1	70	56.663	ENSSPAG00000001023	hfm1	90	64.384	Stegastes_partitus
ENSCGRG00001016995	Hfm1	100	69.344	ENSSSCG00000006912	HFM1	100	69.344	Sus_scrofa
ENSCGRG00001016995	Hfm1	66	71.033	ENSTGUG00000006172	HFM1	97	71.429	Taeniopygia_guttata
ENSCGRG00001016995	Hfm1	100	69.800	ENSTTRG00000013933	HFM1	100	69.800	Tursiops_truncatus
ENSCGRG00001016995	Hfm1	93	72.586	ENSVPAG00000011331	HFM1	93	72.586	Vicugna_pacos
ENSCGRG00001016995	Hfm1	72	75.243	ENSVVUG00000020760	HFM1	98	75.049	Vulpes_vulpes
ENSCGRG00001016995	Hfm1	56	63.165	ENSXMAG00000004178	hfm1	87	63.165	Xiphophorus_maculatus