EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00001016998 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Minus strand
Length: 760 bases
Position: chrscaffold_61:633193-633952
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001016752	SMN	PF06003.12	2.5e-71	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001020996	-	717	-	ENSCGRP00001016752	238 (aa)	-	-

Gene Model

Click here to download ENSCGRG00001016998's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001016998's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00001016998	-	100	77.700	ENSCGRG00001017959	-	100	77.003

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001016998	-	96	64.413	ENSG00000205571	SMN2	89	85.366	Homo_sapiens
ENSCGRG00001016998	-	96	64.413	ENSG00000172062	SMN1	99	64.041	Homo_sapiens
ENSCGRG00001016998	-	91	38.745	ENSAPOG00000011324	smn1	94	41.481	Acanthochromis_polyacanthus
ENSCGRG00001016998	-	97	67.260	ENSAMEG00000003316	-	96	66.436	Ailuropoda_melanoleuca
ENSCGRG00001016998	-	87	39.768	ENSACIG00000019772	-	97	38.462	Amphilophus_citrinellus
ENSCGRG00001016998	-	91	38.745	ENSAOCG00000024444	smn1	94	41.481	Amphiprion_ocellaris
ENSCGRG00001016998	-	91	39.852	ENSAPEG00000016504	smn1	94	41.481	Amphiprion_percula
ENSCGRG00001016998	-	87	41.445	ENSATEG00000002182	smn1	79	40.684	Anabas_testudineus
ENSCGRG00001016998	-	77	48.731	ENSAPLG00000010912	-	97	47.692	Anas_platyrhynchos
ENSCGRG00001016998	-	99	41.724	ENSACAG00000010017	-	99	43.836	Anolis_carolinensis
ENSCGRG00001016998	-	99	63.333	ENSANAG00000032133	-	99	66.667	Aotus_nancymaae
ENSCGRG00001016998	-	87	38.931	ENSACLG00000007308	smn1	88	37.500	Astatotilapia_calliptera
ENSCGRG00001016998	-	92	36.803	ENSAMXG00000013884	smn1	70	42.308	Astyanax_mexicanus
ENSCGRG00001016998	-	96	62.007	ENSBTAG00000005743	SMN2	99	60.140	Bos_taurus
ENSCGRG00001016998	-	96	62.766	ENSCJAG00000016290	-	99	62.116	Callithrix_jacchus
ENSCGRG00001016998	-	100	67.820	ENSCAFG00000007812	SMN	100	67.128	Canis_familiaris
ENSCGRG00001016998	-	99	67.944	ENSCAFG00020019229	-	93	67.247	Canis_lupus_dingo
ENSCGRG00001016998	-	96	62.278	ENSCHIG00000015559	-	100	60.473	Capra_hircus
ENSCGRG00001016998	-	99	66.319	ENSTSYG00000012058	-	99	65.625	Carlito_syrichta
ENSCGRG00001016998	-	82	62.019	ENSCAPG00000011021	-	93	62.981	Cavia_aperea
ENSCGRG00001016998	-	99	61.301	ENSCPOG00000012328	-	99	59.589	Cavia_porcellus
ENSCGRG00001016998	-	100	62.759	ENSCPOG00000036973	-	100	61.034	Cavia_porcellus
ENSCGRG00001016998	-	96	60.000	ENSCCAG00000018127	-	99	62.887	Cebus_capucinus
ENSCGRG00001016998	-	96	64.769	ENSCATG00000037002	-	99	64.384	Cercocebus_atys
ENSCGRG00001016998	-	100	59.661	ENSCLAG00000000284	-	100	59.661	Chinchilla_lanigera
ENSCGRG00001016998	-	96	62.278	ENSCSAG00000015688	-	99	64.384	Chlorocebus_sabaeus
ENSCGRG00001016998	-	94	45.487	ENSCPBG00000010968	-	85	44.043	Chrysemys_picta_bellii
ENSCGRG00001016998	-	94	59.286	ENSCANG00000033324	-	95	59.286	Colobus_angolensis_palliatus
ENSCGRG00001016998	-	96	65.233	ENSCANG00000038242	-	100	64.130	Colobus_angolensis_palliatus
ENSCGRG00001016998	-	100	77.700	ENSCGRG00000007698	Smn1	100	77.003	Cricetulus_griseus_crigri
ENSCGRG00001016998	-	81	38.393	ENSCSEG00000015227	smn1	71	44.878	Cynoglossus_semilaevis
ENSCGRG00001016998	-	92	40.876	ENSCVAG00000007498	smn1	95	40.794	Cyprinodon_variegatus
ENSCGRG00001016998	-	99	38.328	ENSDARG00000018494	smn1	98	38.095	Danio_rerio
ENSCGRG00001016998	-	88	73.214	ENSDNOG00000007283	-	93	72.768	Dasypus_novemcinctus
ENSCGRG00001016998	-	70	52.857	ENSDNOG00000045949	-	91	52.857	Dasypus_novemcinctus
ENSCGRG00001016998	-	100	71.269	ENSDORG00000007082	Smn1	99	70.522	Dipodomys_ordii
ENSCGRG00001016998	-	66	50.485	ENSETEG00000001406	-	93	48.168	Echinops_telfairi
ENSCGRG00001016998	-	87	35.965	ENSEBUG00000011902	smn1	65	36.979	Eptatretus_burgeri
ENSCGRG00001016998	-	83	70.588	ENSEASG00005018000	-	75	70.098	Equus_asinus_asinus
ENSCGRG00001016998	-	100	64.605	ENSECAG00000015215	-	100	64.261	Equus_caballus
ENSCGRG00001016998	-	81	70.874	ENSEEUG00000015777	-	83	70.388	Erinaceus_europaeus
ENSCGRG00001016998	-	91	42.435	ENSELUG00000018067	smn1	79	43.421	Esox_lucius
ENSCGRG00001016998	-	100	65.172	ENSFCAG00000028292	SMN	100	64.483	Felis_catus
ENSCGRG00001016998	-	85	54.808	ENSFALG00000012320	-	69	52.880	Ficedula_albicollis
ENSCGRG00001016998	-	100	61.486	ENSFDAG00000017683	-	100	61.149	Fukomys_damarensis
ENSCGRG00001016998	-	91	35.401	ENSFHEG00000018508	smn1	74	44.500	Fundulus_heteroclitus
ENSCGRG00001016998	-	95	37.546	ENSGMOG00000017279	smn1	95	37.175	Gadus_morhua
ENSCGRG00001016998	-	91	45.946	ENSGALG00000002430	SMN	95	43.462	Gallus_gallus
ENSCGRG00001016998	-	91	38.545	ENSGAFG00000009501	smn1	94	41.045	Gambusia_affinis
ENSCGRG00001016998	-	91	36.704	ENSGACG00000010584	smn1	91	39.552	Gasterosteus_aculeatus
ENSCGRG00001016998	-	94	42.599	ENSGAGG00000011374	-	97	44.404	Gopherus_agassizii
ENSCGRG00001016998	-	94	55.678	ENSGGOG00000003872	-	100	53.285	Gorilla_gorilla
ENSCGRG00001016998	-	57	57.377	ENSGGOG00000026704	-	91	57.216	Gorilla_gorilla
ENSCGRG00001016998	-	91	38.148	ENSHBUG00000013987	smn1	94	39.623	Haplochromis_burtoni
ENSCGRG00001016998	-	99	62.153	ENSHGLG00000001018	-	98	61.806	Heterocephalus_glaber_female
ENSCGRG00001016998	-	100	59.375	ENSHGLG00000001905	-	100	59.028	Heterocephalus_glaber_female
ENSCGRG00001016998	-	99	62.153	ENSHGLG00100011252	-	98	61.806	Heterocephalus_glaber_male
ENSCGRG00001016998	-	95	59.058	ENSHGLG00100018676	-	100	58.696	Heterocephalus_glaber_male
ENSCGRG00001016998	-	87	37.313	ENSHCOG00000017136	smn1	87	36.576	Hippocampus_comes
ENSCGRG00001016998	-	91	37.956	ENSIPUG00000012580	smn1	86	37.857	Ictalurus_punctatus
ENSCGRG00001016998	-	89	66.412	ENSSTOG00000012288	-	100	65.091	Ictidomys_tridecemlineatus
ENSCGRG00001016998	-	53	54.745	ENSJJAG00000014853	-	89	59.420	Jaculus_jaculus
ENSCGRG00001016998	-	91	37.143	ENSKMAG00000007239	smn1	94	39.700	Kryptolebias_marmoratus
ENSCGRG00001016998	-	91	41.912	ENSLBEG00000022550	smn1	94	41.264	Labrus_bergylta
ENSCGRG00001016998	-	76	35.784	ENSLACG00000009808	-	65	35.500	Latimeria_chalumnae
ENSCGRG00001016998	-	91	39.925	ENSLOCG00000011339	smn1	94	40.876	Lepisosteus_oculatus
ENSCGRG00001016998	-	100	63.356	ENSLAFG00000003425	-	96	63.014	Loxodonta_africana
ENSCGRG00001016998	-	96	65.480	ENSMFAG00000031523	SMN1	99	65.068	Macaca_fascicularis
ENSCGRG00001016998	-	96	61.210	ENSMFAG00000008812	-	99	60.959	Macaca_fascicularis
ENSCGRG00001016998	-	96	61.210	ENSMMUG00000030594	-	99	60.959	Macaca_mulatta
ENSCGRG00001016998	-	96	65.480	ENSMMUG00000020214	SMN1	99	65.068	Macaca_mulatta
ENSCGRG00001016998	-	86	62.896	ENSMNEG00000036423	-	99	57.647	Macaca_nemestrina
ENSCGRG00001016998	-	96	65.125	ENSMNEG00000035094	-	99	64.726	Macaca_nemestrina
ENSCGRG00001016998	-	95	64.388	ENSMLEG00000041902	-	99	64.384	Mandrillus_leucophaeus
ENSCGRG00001016998	-	91	38.321	ENSMAMG00000011034	smn1	94	39.852	Mastacembelus_armatus
ENSCGRG00001016998	-	76	51.613	ENSMGAG00000008889	-	95	48.128	Meleagris_gallopavo
ENSCGRG00001016998	-	100	75.958	ENSMAUG00000010262	Smn1	100	75.610	Mesocricetus_auratus
ENSCGRG00001016998	-	95	51.601	ENSMICG00000034708	-	99	52.055	Microcebus_murinus
ENSCGRG00001016998	-	100	73.519	ENSMOCG00000017833	Smn1	100	72.822	Microtus_ochrogaster
ENSCGRG00001016998	-	92	36.742	ENSMMOG00000005504	smn1	96	38.550	Mola_mola
ENSCGRG00001016998	-	99	51.220	ENSMODG00000001436	-	98	50.694	Monodelphis_domestica
ENSCGRG00001016998	-	91	40.146	ENSMALG00000008025	smn1	94	40.672	Monopterus_albus
ENSCGRG00001016998	-	100	72.569	MGP_CAROLIEiJ_G0018836	Smn1	100	72.569	Mus_caroli
ENSCGRG00001016998	-	100	73.611	ENSMUSG00000021645	Smn1	100	73.611	Mus_musculus
ENSCGRG00001016998	-	100	66.783	MGP_PahariEiJ_G0015911	Smn1	100	71.678	Mus_pahari
ENSCGRG00001016998	-	100	72.917	MGP_SPRETEiJ_G0019718	Smn1	100	72.917	Mus_spretus
ENSCGRG00001016998	-	94	67.636	ENSMPUG00000014470	-	98	67.273	Mustela_putorius_furo
ENSCGRG00001016998	-	97	65.744	ENSMLUG00000010603	-	96	64.883	Myotis_lucifugus
ENSCGRG00001016998	-	100	68.166	ENSNGAG00000019833	Smn1	100	67.474	Nannospalax_galili
ENSCGRG00001016998	-	99	63.699	ENSNLEG00000004454	-	99	63.699	Nomascus_leucogenys
ENSCGRG00001016998	-	74	59.474	ENSMEUG00000011393	-	85	58.639	Notamacropus_eugenii
ENSCGRG00001016998	-	81	67.619	ENSOPRG00000002015	-	83	68.571	Ochotona_princeps
ENSCGRG00001016998	-	94	62.500	ENSODEG00000015976	-	97	61.765	Octodon_degus
ENSCGRG00001016998	-	94	49.270	ENSOANG00000001626	-	96	49.091	Ornithorhynchus_anatinus
ENSCGRG00001016998	-	99	58.763	ENSOCUG00000026649	-	99	61.512	Oryctolagus_cuniculus
ENSCGRG00001016998	-	99	68.773	ENSOCUG00000025183	-	99	68.401	Oryctolagus_cuniculus
ENSCGRG00001016998	-	100	63.542	ENSOCUG00000017097	-	99	63.542	Oryctolagus_cuniculus
ENSCGRG00001016998	-	91	40.226	ENSORLG00020007936	smn1	94	37.736	Oryzias_latipes_hni
ENSCGRG00001016998	-	91	41.045	ENSORLG00015022425	smn1	69	45.000	Oryzias_latipes_hsok
ENSCGRG00001016998	-	91	39.338	ENSOMEG00000007824	smn1	94	41.791	Oryzias_melastigma
ENSCGRG00001016998	-	91	58.824	ENSOGAG00000031414	-	100	57.292	Otolemur_garnettii
ENSCGRG00001016998	-	88	69.778	ENSOARG00000005425	-	76	70.048	Ovis_aries
ENSCGRG00001016998	-	96	64.057	ENSPPAG00000036640	-	99	63.699	Pan_paniscus
ENSCGRG00001016998	-	100	65.517	ENSPPRG00000005575	-	100	64.828	Panthera_pardus
ENSCGRG00001016998	-	100	65.292	ENSPTIG00000007745	-	100	64.948	Panthera_tigris_altaica
ENSCGRG00001016998	-	96	63.380	ENSPTRG00000016955	-	99	63.051	Pan_troglodytes
ENSCGRG00001016998	-	99	64.726	ENSPANG00000013601	-	99	64.726	Papio_anubis
ENSCGRG00001016998	-	95	61.372	ENSPANG00000000253	-	98	61.111	Papio_anubis
ENSCGRG00001016998	-	91	37.591	ENSPKIG00000011096	smn1	94	39.313	Paramormyrops_kingsleyae
ENSCGRG00001016998	-	89	49.345	ENSPSIG00000014787	-	66	49.761	Pelodiscus_sinensis
ENSCGRG00001016998	-	97	37.676	ENSPMGG00000012285	smn1	97	37.676	Periophthalmus_magnuspinnatus
ENSCGRG00001016998	-	80	37.073	ENSPMAG00000005004	smn1	67	37.824	Petromyzon_marinus
ENSCGRG00001016998	-	99	52.962	ENSPCIG00000025764	-	99	52.431	Phascolarctos_cinereus
ENSCGRG00001016998	-	91	40.364	ENSPFOG00000007786	smn1	94	42.164	Poecilia_formosa
ENSCGRG00001016998	-	91	40.364	ENSPLAG00000012071	smn1	94	42.164	Poecilia_latipinna
ENSCGRG00001016998	-	91	40.364	ENSPMEG00000017085	smn1	94	42.164	Poecilia_mexicana
ENSCGRG00001016998	-	91	40.590	ENSPREG00000005824	smn1	94	41.418	Poecilia_reticulata
ENSCGRG00001016998	-	87	72.973	ENSPPYG00000015533	-	80	72.973	Pongo_abelii
ENSCGRG00001016998	-	80	45.000	ENSPPYG00000019189	-	79	44.390	Pongo_abelii
ENSCGRG00001016998	-	87	69.027	ENSPCAG00000004187	-	84	67.257	Procavia_capensis
ENSCGRG00001016998	-	88	54.709	ENSPCOG00000022307	-	84	54.783	Propithecus_coquereli
ENSCGRG00001016998	-	96	66.667	ENSPVAG00000005977	-	100	65.068	Pteropus_vampyrus
ENSCGRG00001016998	-	78	43.478	ENSPNAG00000014007	smn1	61	44.175	Pygocentrus_nattereri
ENSCGRG00001016998	-	100	72.222	ENSRNOG00000018067	Smn1	100	71.528	Rattus_norvegicus
ENSCGRG00001016998	-	94	55.072	ENSRBIG00000036775	-	95	55.072	Rhinopithecus_bieti
ENSCGRG00001016998	-	96	64.769	ENSRBIG00000037052	-	99	64.384	Rhinopithecus_bieti
ENSCGRG00001016998	-	99	55.017	ENSRROG00000031088	-	99	55.017	Rhinopithecus_roxellana
ENSCGRG00001016998	-	96	64.769	ENSRROG00000039399	-	99	64.384	Rhinopithecus_roxellana
ENSCGRG00001016998	-	77	65.534	ENSSBOG00000020112	-	72	64.251	Saimiri_boliviensis_boliviensis
ENSCGRG00001016998	-	96	62.950	ENSSBOG00000011665	-	99	62.630	Saimiri_boliviensis_boliviensis
ENSCGRG00001016998	-	99	52.265	ENSSHAG00000001499	-	95	52.431	Sarcophilus_harrisii
ENSCGRG00001016998	-	91	41.199	ENSSFOG00015015507	smn1	69	47.475	Scleropages_formosus
ENSCGRG00001016998	-	91	38.462	ENSSMAG00000007922	smn1	94	39.259	Scophthalmus_maximus
ENSCGRG00001016998	-	91	38.235	ENSSDUG00000018533	smn1	94	40.511	Seriola_dumerili
ENSCGRG00001016998	-	91	38.235	ENSSLDG00000021135	smn1	94	40.511	Seriola_lalandi_dorsalis
ENSCGRG00001016998	-	91	46.792	ENSSPUG00000000373	-	93	46.415	Sphenodon_punctatus
ENSCGRG00001016998	-	91	39.130	ENSSPAG00000004345	smn1	94	40.590	Stegastes_partitus
ENSCGRG00001016998	-	83	53.030	ENSSSCG00000033865	-	92	59.487	Sus_scrofa
ENSCGRG00001016998	-	96	46.415	ENSSSCG00000029127	-	98	51.087	Sus_scrofa
ENSCGRG00001016998	-	97	67.829	ENSSSCG00000016970	-	100	68.401	Sus_scrofa
ENSCGRG00001016998	-	93	43.885	ENSTGUG00000001548	-	100	42.806	Taeniopygia_guttata
ENSCGRG00001016998	-	50	34.969	ENSTRUG00000000736	smn	96	36.940	Takifugu_rubripes
ENSCGRG00001016998	-	92	38.768	ENSTNIG00000009892	smn1	95	37.319	Tetraodon_nigroviridis
ENSCGRG00001016998	-	60	60.417	ENSTBEG00000002399	-	93	60.417	Tupaia_belangeri
ENSCGRG00001016998	-	97	63.799	ENSTTRG00000005080	-	100	63.356	Tursiops_truncatus
ENSCGRG00001016998	-	57	61.413	ENSUAMG00000024947	-	70	61.458	Ursus_americanus
ENSCGRG00001016998	-	97	67.616	ENSUMAG00000007842	-	74	66.782	Ursus_maritimus
ENSCGRG00001016998	-	90	53.208	ENSVPAG00000009887	-	100	51.986	Vicugna_pacos
ENSCGRG00001016998	-	100	67.820	ENSVVUG00000006934	-	100	67.128	Vulpes_vulpes
ENSCGRG00001016998	-	93	42.029	ENSXETG00000018189	smn2	96	41.404	Xenopus_tropicalis
ENSCGRG00001016998	-	92	38.989	ENSXMAG00000001521	smn1	95	41.481	Xiphophorus_maculatus