EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCGRG00001017046 (Gene tree)
Gene ID: -
Gene Symbol: Apex1
Alias: Ape
Full Name: apurinic/apyrimidinic endodeoxyribonuclease 1
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Plus strand
Length: 5700 bases
Position: chrscaffold_41:12018878-12024577
Accession: 100689281
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001016811	Exo_endo_phos	PF03372.23	1.5e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001021055	-	4848	-	ENSCGRP00001016811	317 (aa)	XP_007647980	Q9Z2J2

Gene Model

Click here to download ENSCGRG00001017046's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001017046's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001017046	Apex1	100	92.138	ENSG00000100823	APEX1	99	93.529	Homo_sapiens
ENSCGRG00001017046	Apex1	88	67.742	ENSAPOG00000017002	apex1	99	63.175	Acanthochromis_polyacanthus
ENSCGRG00001017046	Apex1	100	91.824	ENSAMEG00000005418	APEX1	100	91.824	Ailuropoda_melanoleuca
ENSCGRG00001017046	Apex1	88	70.144	ENSACIG00000010653	apex1	97	69.204	Amphilophus_citrinellus
ENSCGRG00001017046	Apex1	88	67.742	ENSAOCG00000009649	apex1	99	63.407	Amphiprion_ocellaris
ENSCGRG00001017046	Apex1	88	67.742	ENSAPEG00000021453	apex1	99	63.407	Amphiprion_percula
ENSCGRG00001017046	Apex1	99	66.242	ENSATEG00000002883	apex1	97	66.242	Anabas_testudineus
ENSCGRG00001017046	Apex1	100	69.159	ENSACAG00000008099	APEX1	100	69.159	Anolis_carolinensis
ENSCGRG00001017046	Apex1	100	93.082	ENSANAG00000030117	APEX1	100	93.082	Aotus_nancymaae
ENSCGRG00001017046	Apex1	87	70.290	ENSACLG00000018441	apex1	99	65.615	Astatotilapia_calliptera
ENSCGRG00001017046	Apex1	99	65.079	ENSAMXG00000034699	apex1	98	65.079	Astyanax_mexicanus
ENSCGRG00001017046	Apex1	100	90.252	ENSBTAG00000002745	APEX1	100	90.252	Bos_taurus
ENSCGRG00001017046	Apex1	80	45.312	WBGene00001372	exo-3	88	45.312	Caenorhabditis_elegans
ENSCGRG00001017046	Apex1	100	92.453	ENSCJAG00000009726	APEX1	100	92.453	Callithrix_jacchus
ENSCGRG00001017046	Apex1	100	91.824	ENSCAFG00000032033	APEX1	100	91.824	Canis_familiaris
ENSCGRG00001017046	Apex1	100	91.824	ENSCAFG00020014377	-	100	91.824	Canis_lupus_dingo
ENSCGRG00001017046	Apex1	54	89.535	ENSCAFG00020023002	-	96	89.535	Canis_lupus_dingo
ENSCGRG00001017046	Apex1	100	89.937	ENSCHIG00000007298	-	100	89.937	Capra_hircus
ENSCGRG00001017046	Apex1	98	72.436	ENSCHIG00000014537	-	99	72.436	Capra_hircus
ENSCGRG00001017046	Apex1	100	90.252	ENSTSYG00000034813	APEX1	100	90.252	Carlito_syrichta
ENSCGRG00001017046	Apex1	86	85.036	ENSCAPG00000016235	APEX1	99	86.973	Cavia_aperea
ENSCGRG00001017046	Apex1	100	90.566	ENSCPOG00000030909	APEX1	100	90.566	Cavia_porcellus
ENSCGRG00001017046	Apex1	100	79.560	ENSCCAG00000031931	-	100	79.560	Cebus_capucinus
ENSCGRG00001017046	Apex1	100	92.453	ENSCCAG00000033056	-	100	92.453	Cebus_capucinus
ENSCGRG00001017046	Apex1	100	92.138	ENSCATG00000015580	APEX1	100	92.138	Cercocebus_atys
ENSCGRG00001017046	Apex1	100	91.195	ENSCLAG00000001002	APEX1	100	91.195	Chinchilla_lanigera
ENSCGRG00001017046	Apex1	100	91.824	ENSCSAG00000016670	-	100	91.824	Chlorocebus_sabaeus
ENSCGRG00001017046	Apex1	100	91.824	ENSCSAG00000016685	-	100	91.824	Chlorocebus_sabaeus
ENSCGRG00001017046	Apex1	100	70.533	ENSCPBG00000009567	APEX1	100	70.533	Chrysemys_picta_bellii
ENSCGRG00001017046	Apex1	91	56.271	ENSCING00000008137	-	94	56.271	Ciona_intestinalis
ENSCGRG00001017046	Apex1	100	47.634	ENSCSAVG00000007144	-	100	53.282	Ciona_savignyi
ENSCGRG00001017046	Apex1	100	92.453	ENSCANG00000030726	APEX1	100	92.453	Colobus_angolensis_palliatus
ENSCGRG00001017046	Apex1	100	100.000	ENSCGRG00000008984	Apex1	100	100.000	Cricetulus_griseus_crigri
ENSCGRG00001017046	Apex1	99	63.407	ENSCSEG00000017499	apex1	99	63.407	Cynoglossus_semilaevis
ENSCGRG00001017046	Apex1	99	64.762	ENSCVAG00000022075	apex1	99	64.762	Cyprinodon_variegatus
ENSCGRG00001017046	Apex1	100	64.669	ENSDARG00000045843	apex1	100	64.353	Danio_rerio
ENSCGRG00001017046	Apex1	100	87.421	ENSDNOG00000042234	APEX1	95	87.421	Dasypus_novemcinctus
ENSCGRG00001017046	Apex1	100	90.252	ENSDORG00000001616	Apex1	100	90.252	Dipodomys_ordii
ENSCGRG00001017046	Apex1	100	90.881	ENSETEG00000004855	-	100	90.881	Echinops_telfairi
ENSCGRG00001017046	Apex1	75	65.272	ENSEBUG00000000622	-	92	65.272	Eptatretus_burgeri
ENSCGRG00001017046	Apex1	100	91.824	ENSEASG00005017489	APEX1	74	91.824	Equus_asinus_asinus
ENSCGRG00001017046	Apex1	100	91.824	ENSECAG00000022325	APEX1	82	91.824	Equus_caballus
ENSCGRG00001017046	Apex1	91	90.625	ENSEEUG00000012569	APEX1	100	90.625	Erinaceus_europaeus
ENSCGRG00001017046	Apex1	100	63.722	ENSELUG00000021706	apex1	100	64.038	Esox_lucius
ENSCGRG00001017046	Apex1	100	92.453	ENSFCAG00000030869	APEX1	100	92.453	Felis_catus
ENSCGRG00001017046	Apex1	100	91.195	ENSFDAG00000006120	APEX1	100	91.195	Fukomys_damarensis
ENSCGRG00001017046	Apex1	99	66.349	ENSFHEG00000009031	apex1	83	66.349	Fundulus_heteroclitus
ENSCGRG00001017046	Apex1	99	61.270	ENSGMOG00000007943	apex1	99	61.270	Gadus_morhua
ENSCGRG00001017046	Apex1	88	70.251	ENSGAFG00000005311	apex1	99	65.397	Gambusia_affinis
ENSCGRG00001017046	Apex1	99	64.984	ENSGACG00000019497	apex1	99	68.797	Gasterosteus_aculeatus
ENSCGRG00001017046	Apex1	100	70.219	ENSGAGG00000014999	APEX1	100	70.219	Gopherus_agassizii
ENSCGRG00001017046	Apex1	100	92.453	ENSGGOG00000002128	APEX1	100	92.453	Gorilla_gorilla
ENSCGRG00001017046	Apex1	99	65.079	ENSHBUG00000005894	apex1	99	65.506	Haplochromis_burtoni
ENSCGRG00001017046	Apex1	100	91.509	ENSHGLG00000002848	APEX1	100	91.509	Heterocephalus_glaber_female
ENSCGRG00001017046	Apex1	100	91.509	ENSHGLG00100017878	APEX1	100	91.509	Heterocephalus_glaber_male
ENSCGRG00001017046	Apex1	99	64.780	ENSHCOG00000009961	apex1	99	64.780	Hippocampus_comes
ENSCGRG00001017046	Apex1	100	67.085	ENSIPUG00000005799	apex1	100	67.085	Ictalurus_punctatus
ENSCGRG00001017046	Apex1	100	90.881	ENSSTOG00000010096	APEX1	100	90.881	Ictidomys_tridecemlineatus
ENSCGRG00001017046	Apex1	100	81.447	ENSJJAG00000003660	-	100	81.447	Jaculus_jaculus
ENSCGRG00001017046	Apex1	100	90.566	ENSJJAG00000012067	-	100	90.566	Jaculus_jaculus
ENSCGRG00001017046	Apex1	94	81.208	ENSJJAG00000020465	-	96	81.208	Jaculus_jaculus
ENSCGRG00001017046	Apex1	88	69.892	ENSKMAG00000021171	apex1	99	64.762	Kryptolebias_marmoratus
ENSCGRG00001017046	Apex1	99	64.038	ENSLBEG00000010248	apex1	99	64.038	Labrus_bergylta
ENSCGRG00001017046	Apex1	100	66.246	ENSLACG00000008617	APEX1	100	66.246	Latimeria_chalumnae
ENSCGRG00001017046	Apex1	100	66.873	ENSLOCG00000015516	apex1	99	66.873	Lepisosteus_oculatus
ENSCGRG00001017046	Apex1	100	89.937	ENSLAFG00000021872	APEX1	100	89.937	Loxodonta_africana
ENSCGRG00001017046	Apex1	100	91.824	ENSMFAG00000002565	APEX1	100	91.824	Macaca_fascicularis
ENSCGRG00001017046	Apex1	100	91.824	ENSMMUG00000048039	APEX1	100	91.824	Macaca_mulatta
ENSCGRG00001017046	Apex1	100	91.824	ENSMNEG00000036944	APEX1	100	91.824	Macaca_nemestrina
ENSCGRG00001017046	Apex1	100	92.138	ENSMLEG00000042125	APEX1	100	92.138	Mandrillus_leucophaeus
ENSCGRG00001017046	Apex1	88	70.968	ENSMAMG00000023526	apex1	99	66.562	Mastacembelus_armatus
ENSCGRG00001017046	Apex1	87	70.290	ENSMZEG00005014187	apex1	99	65.615	Maylandia_zebra
ENSCGRG00001017046	Apex1	100	97.476	ENSMAUG00000013994	Apex1	100	97.476	Mesocricetus_auratus
ENSCGRG00001017046	Apex1	100	91.509	ENSMICG00000043554	APEX1	100	91.509	Microcebus_murinus
ENSCGRG00001017046	Apex1	100	93.060	ENSMOCG00000013721	Apex1	100	93.060	Microtus_ochrogaster
ENSCGRG00001017046	Apex1	88	66.786	ENSMMOG00000010031	apex1	97	62.382	Mola_mola
ENSCGRG00001017046	Apex1	100	82.188	ENSMODG00000007125	APEX1	100	83.230	Monodelphis_domestica
ENSCGRG00001017046	Apex1	88	63.441	ENSMALG00000011699	apex1	79	62.116	Monopterus_albus
ENSCGRG00001017046	Apex1	99	93.987	MGP_CAROLIEiJ_G0019209	Apex1	100	94.350	Mus_caroli
ENSCGRG00001017046	Apex1	100	94.322	ENSMUSG00000035960	Apex1	100	94.322	Mus_musculus
ENSCGRG00001017046	Apex1	100	94.006	MGP_PahariEiJ_G0030232	Apex1	100	94.006	Mus_pahari
ENSCGRG00001017046	Apex1	100	94.322	MGP_SPRETEiJ_G0020101	Apex1	100	94.322	Mus_spretus
ENSCGRG00001017046	Apex1	100	90.938	ENSMLUG00000028957	APEX1	100	90.938	Myotis_lucifugus
ENSCGRG00001017046	Apex1	88	73.835	ENSNGAG00000021748	-	86	73.835	Nannospalax_galili
ENSCGRG00001017046	Apex1	100	90.881	ENSNGAG00000002725	-	100	90.881	Nannospalax_galili
ENSCGRG00001017046	Apex1	87	69.928	ENSNBRG00000005334	apex1	91	65.300	Neolamprologus_brichardi
ENSCGRG00001017046	Apex1	100	92.767	ENSNLEG00000010839	APEX1	100	92.767	Nomascus_leucogenys
ENSCGRG00001017046	Apex1	100	83.596	ENSMEUG00000014519	APEX1	100	83.596	Notamacropus_eugenii
ENSCGRG00001017046	Apex1	100	90.252	ENSOPRG00000014029	APEX1	100	90.252	Ochotona_princeps
ENSCGRG00001017046	Apex1	97	73.463	ENSODEG00000004777	-	99	73.463	Octodon_degus
ENSCGRG00001017046	Apex1	100	91.195	ENSODEG00000001703	-	100	91.195	Octodon_degus
ENSCGRG00001017046	Apex1	100	69.444	ENSODEG00000006583	-	100	69.444	Octodon_degus
ENSCGRG00001017046	Apex1	88	70.504	ENSONIG00000012089	apex1	99	65.931	Oreochromis_niloticus
ENSCGRG00001017046	Apex1	90	81.053	ENSOANG00000008836	APEX1	80	76.235	Ornithorhynchus_anatinus
ENSCGRG00001017046	Apex1	100	92.453	ENSOCUG00000005022	APEX1	100	92.453	Oryctolagus_cuniculus
ENSCGRG00001017046	Apex1	99	66.352	ENSORLG00000012378	apex1	99	66.352	Oryzias_latipes
ENSCGRG00001017046	Apex1	99	66.352	ENSORLG00020021371	apex1	99	66.352	Oryzias_latipes_hni
ENSCGRG00001017046	Apex1	99	66.352	ENSORLG00015020089	apex1	99	66.352	Oryzias_latipes_hsok
ENSCGRG00001017046	Apex1	88	69.892	ENSOMEG00000018876	apex1	99	65.409	Oryzias_melastigma
ENSCGRG00001017046	Apex1	100	91.824	ENSOGAG00000013335	-	100	91.824	Otolemur_garnettii
ENSCGRG00001017046	Apex1	98	80.769	ENSOGAG00000029355	-	100	80.769	Otolemur_garnettii
ENSCGRG00001017046	Apex1	97	85.714	ENSOARG00000001876	-	100	85.714	Ovis_aries
ENSCGRG00001017046	Apex1	99	76.433	ENSOARG00000014424	-	99	76.115	Ovis_aries
ENSCGRG00001017046	Apex1	100	88.994	ENSOARG00000019740	-	100	88.994	Ovis_aries
ENSCGRG00001017046	Apex1	100	92.453	ENSPPAG00000038760	APEX1	100	92.453	Pan_paniscus
ENSCGRG00001017046	Apex1	100	92.767	ENSPPRG00000011794	APEX1	100	92.767	Panthera_pardus
ENSCGRG00001017046	Apex1	100	92.453	ENSPTIG00000014829	APEX1	100	92.453	Panthera_tigris_altaica
ENSCGRG00001017046	Apex1	100	92.453	ENSPTRG00000006093	APEX1	100	92.453	Pan_troglodytes
ENSCGRG00001017046	Apex1	100	92.138	ENSPANG00000022757	APEX1	100	92.138	Papio_anubis
ENSCGRG00001017046	Apex1	87	67.148	ENSPKIG00000003504	apex1	100	63.272	Paramormyrops_kingsleyae
ENSCGRG00001017046	Apex1	100	54.381	ENSPMGG00000016596	apex1	97	54.381	Periophthalmus_magnuspinnatus
ENSCGRG00001017046	Apex1	100	95.584	ENSPEMG00000019097	Apex1	100	95.584	Peromyscus_maniculatus_bairdii
ENSCGRG00001017046	Apex1	95	65.116	ENSPMAG00000007275	-	100	65.116	Petromyzon_marinus
ENSCGRG00001017046	Apex1	100	82.759	ENSPCIG00000023274	APEX1	100	84.112	Phascolarctos_cinereus
ENSCGRG00001017046	Apex1	88	70.609	ENSPFOG00000004178	apex1	99	65.397	Poecilia_formosa
ENSCGRG00001017046	Apex1	88	70.251	ENSPLAG00000012779	apex1	99	65.615	Poecilia_latipinna
ENSCGRG00001017046	Apex1	88	70.609	ENSPMEG00000019623	apex1	99	65.397	Poecilia_mexicana
ENSCGRG00001017046	Apex1	88	70.251	ENSPREG00000014298	apex1	99	65.079	Poecilia_reticulata
ENSCGRG00001017046	Apex1	100	92.138	ENSPPYG00000005565	APEX1	100	92.138	Pongo_abelii
ENSCGRG00001017046	Apex1	100	88.994	ENSPCAG00000010376	APEX1	100	88.994	Procavia_capensis
ENSCGRG00001017046	Apex1	100	91.509	ENSPCOG00000021564	APEX1	100	91.509	Propithecus_coquereli
ENSCGRG00001017046	Apex1	100	91.562	ENSPVAG00000010736	APEX1	100	91.562	Pteropus_vampyrus
ENSCGRG00001017046	Apex1	87	70.290	ENSPNYG00000023940	apex1	99	65.615	Pundamilia_nyererei
ENSCGRG00001017046	Apex1	93	64.189	ENSPNAG00000020897	apex1	93	65.035	Pygocentrus_nattereri
ENSCGRG00001017046	Apex1	100	94.006	ENSRNOG00000009663	Apex1	100	94.006	Rattus_norvegicus
ENSCGRG00001017046	Apex1	100	92.138	ENSRBIG00000038325	APEX1	99	92.138	Rhinopithecus_bieti
ENSCGRG00001017046	Apex1	100	92.138	ENSSBOG00000018921	-	100	92.138	Saimiri_boliviensis_boliviensis
ENSCGRG00001017046	Apex1	100	78.233	ENSSBOG00000031372	-	100	78.233	Saimiri_boliviensis_boliviensis
ENSCGRG00001017046	Apex1	100	80.864	ENSSHAG00000013524	APEX1	100	82.209	Sarcophilus_harrisii
ENSCGRG00001017046	Apex1	100	62.145	ENSSFOG00015001948	apex1	100	62.145	Scleropages_formosus
ENSCGRG00001017046	Apex1	99	64.127	ENSSMAG00000013348	apex1	99	64.127	Scophthalmus_maximus
ENSCGRG00001017046	Apex1	99	64.762	ENSSDUG00000016377	apex1	99	64.762	Seriola_dumerili
ENSCGRG00001017046	Apex1	99	65.079	ENSSLDG00000023005	apex1	99	65.079	Seriola_lalandi_dorsalis
ENSCGRG00001017046	Apex1	90	72.982	ENSSPUG00000000531	APEX1	95	72.982	Sphenodon_punctatus
ENSCGRG00001017046	Apex1	99	64.444	ENSSPAG00000000458	apex1	99	63.492	Stegastes_partitus
ENSCGRG00001017046	Apex1	100	91.509	ENSSSCG00000040060	-	100	91.509	Sus_scrofa
ENSCGRG00001017046	Apex1	100	53.251	ENSSSCG00000039705	-	100	53.251	Sus_scrofa
ENSCGRG00001017046	Apex1	74	60.593	ENSTGUG00000014378	APEX1	100	60.593	Taeniopygia_guttata
ENSCGRG00001017046	Apex1	88	66.547	ENSTRUG00000004268	apex1	95	62.222	Takifugu_rubripes
ENSCGRG00001017046	Apex1	99	62.540	ENSTNIG00000005778	apex1	99	62.540	Tetraodon_nigroviridis
ENSCGRG00001017046	Apex1	100	88.365	ENSTBEG00000006405	APEX1	100	88.365	Tupaia_belangeri
ENSCGRG00001017046	Apex1	74	93.220	ENSTTRG00000007860	APEX1	100	93.220	Tursiops_truncatus
ENSCGRG00001017046	Apex1	100	91.509	ENSUAMG00000010457	APEX1	100	91.509	Ursus_americanus
ENSCGRG00001017046	Apex1	100	91.509	ENSUMAG00000009178	APEX1	100	91.509	Ursus_maritimus
ENSCGRG00001017046	Apex1	74	87.712	ENSVPAG00000005083	APEX1	100	87.712	Vicugna_pacos
ENSCGRG00001017046	Apex1	100	91.824	ENSVVUG00000009010	APEX1	100	91.824	Vulpes_vulpes
ENSCGRG00001017046	Apex1	100	66.562	ENSXETG00000024773	apex1	100	66.562	Xenopus_tropicalis
ENSCGRG00001017046	Apex1	88	70.251	ENSXCOG00000015233	apex1	99	65.714	Xiphophorus_couchianus
ENSCGRG00001017046	Apex1	88	70.251	ENSXMAG00000006195	apex1	99	65.714	Xiphophorus_maculatus