EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00001017068 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Plus strand
Length: 21914 bases
Position: chrscaffold_54:2220061-2241974
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001016860	RNase_P_p30	PF01876.16	5.9e-64	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001021104	-	2504	-	ENSCGRP00001016860	238 (aa)	-	-

Gene Model

Click here to download ENSCGRG00001017068's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001017068's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00001017068	-	97	83.983	ENSCGRG00001000834	-	86	83.983

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001017068	-	97	93.103	ENSG00000148688	RPP30	100	84.646	Homo_sapiens
ENSCGRG00001017068	-	99	58.898	ENSAPOG00000023156	rpp30	81	58.898	Acanthochromis_polyacanthus
ENSCGRG00001017068	-	97	93.103	ENSAMEG00000016776	RPP30	87	93.103	Ailuropoda_melanoleuca
ENSCGRG00001017068	-	100	57.322	ENSACIG00000022810	rpp30	91	51.464	Amphilophus_citrinellus
ENSCGRG00001017068	-	97	57.940	ENSAOCG00000016438	rpp30	78	57.940	Amphiprion_ocellaris
ENSCGRG00001017068	-	97	57.940	ENSAPEG00000008697	rpp30	80	57.940	Amphiprion_percula
ENSCGRG00001017068	-	97	58.798	ENSATEG00000015263	rpp30	84	58.798	Anabas_testudineus
ENSCGRG00001017068	-	86	77.073	ENSAPLG00000009959	RPP30	85	77.073	Anas_platyrhynchos
ENSCGRG00001017068	-	97	71.983	ENSACAG00000007996	RPP30	87	71.983	Anolis_carolinensis
ENSCGRG00001017068	-	97	78.879	ENSANAG00000009439	RPP30	72	78.879	Aotus_nancymaae
ENSCGRG00001017068	-	97	55.794	ENSACLG00000015389	-	86	55.794	Astatotilapia_calliptera
ENSCGRG00001017068	-	97	57.759	ENSAMXG00000040653	rpp30	84	57.759	Astyanax_mexicanus
ENSCGRG00001017068	-	97	92.672	ENSBTAG00000002973	RPP30	87	92.672	Bos_taurus
ENSCGRG00001017068	-	97	91.810	ENSCJAG00000011045	RPP30	87	91.810	Callithrix_jacchus
ENSCGRG00001017068	-	97	91.379	ENSCAFG00000031801	RPP30	87	91.379	Canis_familiaris
ENSCGRG00001017068	-	97	91.379	ENSCAFG00020000258	RPP30	87	91.379	Canis_lupus_dingo
ENSCGRG00001017068	-	97	89.224	ENSCHIG00000012901	RPP30	86	89.224	Capra_hircus
ENSCGRG00001017068	-	97	93.103	ENSTSYG00000013903	RPP30	87	93.103	Carlito_syrichta
ENSCGRG00001017068	-	86	68.627	ENSCAPG00000001326	RPP30	81	68.627	Cavia_aperea
ENSCGRG00001017068	-	97	91.810	ENSCPOG00000033174	RPP30	87	91.810	Cavia_porcellus
ENSCGRG00001017068	-	97	91.810	ENSCCAG00000029514	RPP30	87	91.810	Cebus_capucinus
ENSCGRG00001017068	-	97	92.241	ENSCATG00000042072	RPP30	87	92.241	Cercocebus_atys
ENSCGRG00001017068	-	97	92.672	ENSCLAG00000008595	RPP30	87	92.672	Chinchilla_lanigera
ENSCGRG00001017068	-	97	92.672	ENSCSAG00000006694	RPP30	87	92.672	Chlorocebus_sabaeus
ENSCGRG00001017068	-	71	84.615	ENSCHOG00000007023	-	76	84.615	Choloepus_hoffmanni
ENSCGRG00001017068	-	97	76.623	ENSCPBG00000026518	RPP30	86	76.623	Chrysemys_picta_bellii
ENSCGRG00001017068	-	95	40.678	ENSCING00000019714	-	87	39.831	Ciona_intestinalis
ENSCGRG00001017068	-	95	38.430	ENSCSAVG00000011282	-	78	38.430	Ciona_savignyi
ENSCGRG00001017068	-	97	92.672	ENSCANG00000041084	RPP30	87	92.672	Colobus_angolensis_palliatus
ENSCGRG00001017068	-	97	100.000	ENSCGRG00000002508	-	87	100.000	Cricetulus_griseus_crigri
ENSCGRG00001017068	-	97	84.416	ENSCGRG00000006196	-	86	84.416	Cricetulus_griseus_crigri
ENSCGRG00001017068	-	97	54.741	ENSCSEG00000001779	rpp30	79	54.741	Cynoglossus_semilaevis
ENSCGRG00001017068	-	97	58.798	ENSCVAG00000003139	rpp30	86	58.798	Cyprinodon_variegatus
ENSCGRG00001017068	-	97	61.207	ENSDARG00000027428	rpp30	86	61.207	Danio_rerio
ENSCGRG00001017068	-	97	92.672	ENSDNOG00000010186	RPP30	80	92.672	Dasypus_novemcinctus
ENSCGRG00001017068	-	97	93.534	ENSDORG00000015333	Rpp30	87	93.534	Dipodomys_ordii
ENSCGRG00001017068	-	95	32.159	FBgn0283652	Rpp30	76	32.159	Drosophila_melanogaster
ENSCGRG00001017068	-	97	88.362	ENSETEG00000018823	RPP30	87	88.362	Echinops_telfairi
ENSCGRG00001017068	-	63	39.869	ENSEBUG00000003989	-	83	39.869	Eptatretus_burgeri
ENSCGRG00001017068	-	97	92.241	ENSEASG00005011050	RPP30	87	92.241	Equus_asinus_asinus
ENSCGRG00001017068	-	97	92.241	ENSECAG00000021917	RPP30	87	92.241	Equus_caballus
ENSCGRG00001017068	-	95	62.832	ENSEEUG00000009986	-	86	62.832	Erinaceus_europaeus
ENSCGRG00001017068	-	97	68.534	ENSELUG00000003731	rpp30	81	68.534	Esox_lucius
ENSCGRG00001017068	-	97	92.241	ENSFCAG00000029073	RPP30	80	92.241	Felis_catus
ENSCGRG00001017068	-	97	75.862	ENSFALG00000007711	RPP30	87	75.862	Ficedula_albicollis
ENSCGRG00001017068	-	97	92.672	ENSFDAG00000019241	RPP30	87	92.672	Fukomys_damarensis
ENSCGRG00001017068	-	97	56.466	ENSFHEG00000014739	rpp30	83	57.212	Fundulus_heteroclitus
ENSCGRG00001017068	-	97	54.393	ENSGMOG00000005379	rpp30	95	54.393	Gadus_morhua
ENSCGRG00001017068	-	97	75.862	ENSGALG00000006486	RPP30	72	80.899	Gallus_gallus
ENSCGRG00001017068	-	97	55.794	ENSGAFG00000001445	rpp30	86	55.794	Gambusia_affinis
ENSCGRG00001017068	-	99	56.148	ENSGACG00000010285	rpp30	96	49.180	Gasterosteus_aculeatus
ENSCGRG00001017068	-	97	74.892	ENSGAGG00000000980	RPP30	60	74.892	Gopherus_agassizii
ENSCGRG00001017068	-	97	93.534	ENSGGOG00000026917	RPP30	87	93.534	Gorilla_gorilla
ENSCGRG00001017068	-	97	55.794	ENSHBUG00000019332	rpp30	86	55.794	Haplochromis_burtoni
ENSCGRG00001017068	-	97	93.103	ENSHGLG00000013072	RPP30	87	93.103	Heterocephalus_glaber_female
ENSCGRG00001017068	-	97	93.103	ENSHGLG00100017798	RPP30	87	93.103	Heterocephalus_glaber_male
ENSCGRG00001017068	-	97	51.502	ENSHCOG00000004763	-	81	51.502	Hippocampus_comes
ENSCGRG00001017068	-	97	60.776	ENSIPUG00000003863	rpp30	85	60.776	Ictalurus_punctatus
ENSCGRG00001017068	-	97	92.241	ENSSTOG00000027002	RPP30	87	92.241	Ictidomys_tridecemlineatus
ENSCGRG00001017068	-	97	93.966	ENSJJAG00000020041	Rpp30	87	93.966	Jaculus_jaculus
ENSCGRG00001017068	-	97	57.082	ENSKMAG00000015355	rpp30	86	57.082	Kryptolebias_marmoratus
ENSCGRG00001017068	-	97	55.172	ENSLBEG00000019989	rpp30	84	55.172	Labrus_bergylta
ENSCGRG00001017068	-	81	58.904	ENSLACG00000002534	RPP30	96	58.904	Latimeria_chalumnae
ENSCGRG00001017068	-	97	66.379	ENSLOCG00000000031	rpp30	86	66.379	Lepisosteus_oculatus
ENSCGRG00001017068	-	97	92.672	ENSLAFG00000015931	RPP30	87	92.672	Loxodonta_africana
ENSCGRG00001017068	-	97	92.672	ENSMFAG00000031109	RPP30	87	92.672	Macaca_fascicularis
ENSCGRG00001017068	-	97	92.672	ENSMMUG00000006628	RPP30	87	92.672	Macaca_mulatta
ENSCGRG00001017068	-	97	92.241	ENSMNEG00000033838	RPP30	87	92.241	Macaca_nemestrina
ENSCGRG00001017068	-	97	92.672	ENSMLEG00000037578	RPP30	87	92.672	Mandrillus_leucophaeus
ENSCGRG00001017068	-	97	57.940	ENSMAMG00000010934	rpp30	85	57.940	Mastacembelus_armatus
ENSCGRG00001017068	-	97	55.794	ENSMZEG00005018508	-	86	55.794	Maylandia_zebra
ENSCGRG00001017068	-	97	70.690	ENSMGAG00000008452	RPP30	87	70.690	Meleagris_gallopavo
ENSCGRG00001017068	-	97	98.276	ENSMAUG00000008797	Rpp30	87	98.276	Mesocricetus_auratus
ENSCGRG00001017068	-	97	93.103	ENSMICG00000012019	RPP30	87	93.103	Microcebus_murinus
ENSCGRG00001017068	-	97	96.983	ENSMOCG00000016872	Rpp30	87	96.983	Microtus_ochrogaster
ENSCGRG00001017068	-	97	53.219	ENSMMOG00000009266	rpp30	85	53.219	Mola_mola
ENSCGRG00001017068	-	97	83.190	ENSMODG00000006863	-	87	83.190	Monodelphis_domestica
ENSCGRG00001017068	-	97	68.966	ENSMODG00000009342	-	85	68.966	Monodelphis_domestica
ENSCGRG00001017068	-	97	57.082	ENSMALG00000011718	rpp30	85	57.082	Monopterus_albus
ENSCGRG00001017068	-	97	96.552	MGP_CAROLIEiJ_G0022902	Rpp30	87	96.552	Mus_caroli
ENSCGRG00001017068	-	97	96.552	ENSMUSG00000024800	Rpp30	87	96.552	Mus_musculus
ENSCGRG00001017068	-	97	96.983	MGP_PahariEiJ_G0014397	Rpp30	87	96.983	Mus_pahari
ENSCGRG00001017068	-	97	96.552	MGP_SPRETEiJ_G0023821	Rpp30	87	96.552	Mus_spretus
ENSCGRG00001017068	-	97	93.103	ENSMPUG00000017258	RPP30	81	93.103	Mustela_putorius_furo
ENSCGRG00001017068	-	97	93.103	ENSMLUG00000017169	RPP30	87	93.103	Myotis_lucifugus
ENSCGRG00001017068	-	97	93.966	ENSNGAG00000012018	-	87	93.966	Nannospalax_galili
ENSCGRG00001017068	-	99	73.617	ENSNGAG00000014392	-	86	73.617	Nannospalax_galili
ENSCGRG00001017068	-	97	48.069	ENSNBRG00000024170	-	86	48.069	Neolamprologus_brichardi
ENSCGRG00001017068	-	97	93.534	ENSNLEG00000012383	RPP30	87	93.534	Nomascus_leucogenys
ENSCGRG00001017068	-	97	71.849	ENSMEUG00000015587	-	88	71.849	Notamacropus_eugenii
ENSCGRG00001017068	-	60	92.958	ENSOPRG00000007367	-	100	92.958	Ochotona_princeps
ENSCGRG00001017068	-	97	93.966	ENSODEG00000004530	-	88	93.966	Octodon_degus
ENSCGRG00001017068	-	96	67.982	ENSODEG00000004560	-	85	67.982	Octodon_degus
ENSCGRG00001017068	-	87	56.039	ENSONIG00000019140	rpp30	100	56.039	Oreochromis_niloticus
ENSCGRG00001017068	-	97	83.190	ENSOANG00000003415	RPP30	87	83.190	Ornithorhynchus_anatinus
ENSCGRG00001017068	-	97	90.517	ENSOCUG00000006896	RPP30	80	90.517	Oryctolagus_cuniculus
ENSCGRG00001017068	-	97	57.759	ENSORLG00000020420	rpp30	79	57.759	Oryzias_latipes
ENSCGRG00001017068	-	97	58.369	ENSORLG00020009037	-	86	58.369	Oryzias_latipes_hni
ENSCGRG00001017068	-	97	58.369	ENSORLG00015008300	rpp30	80	58.369	Oryzias_latipes_hsok
ENSCGRG00001017068	-	77	53.261	ENSOMEG00000012640	-	98	53.261	Oryzias_melastigma
ENSCGRG00001017068	-	97	92.241	ENSOGAG00000013963	RPP30	87	92.241	Otolemur_garnettii
ENSCGRG00001017068	-	95	84.513	ENSOARG00000015789	RPP30	84	84.513	Ovis_aries
ENSCGRG00001017068	-	97	93.103	ENSPPAG00000043779	RPP30	87	93.103	Pan_paniscus
ENSCGRG00001017068	-	97	92.672	ENSPPRG00000000115	RPP30	87	92.672	Panthera_pardus
ENSCGRG00001017068	-	97	92.672	ENSPTIG00000014949	RPP30	87	92.672	Panthera_tigris_altaica
ENSCGRG00001017068	-	97	93.103	ENSPTRG00000002742	RPP30	86	89.224	Pan_troglodytes
ENSCGRG00001017068	-	97	92.672	ENSPANG00000021710	RPP30	87	92.672	Papio_anubis
ENSCGRG00001017068	-	60	47.222	ENSPKIG00000024858	rpp30	76	47.222	Paramormyrops_kingsleyae
ENSCGRG00001017068	-	86	76.923	ENSPSIG00000013213	RPP30	86	76.923	Pelodiscus_sinensis
ENSCGRG00001017068	-	99	43.404	ENSPMGG00000014872	rpp30	94	43.404	Periophthalmus_magnuspinnatus
ENSCGRG00001017068	-	97	77.155	ENSPEMG00000001948	Rpp30	84	77.155	Peromyscus_maniculatus_bairdii
ENSCGRG00001017068	-	59	43.902	ENSPMAG00000001855	-	99	43.902	Petromyzon_marinus
ENSCGRG00001017068	-	97	83.621	ENSPCIG00000015730	RPP30	87	83.621	Phascolarctos_cinereus
ENSCGRG00001017068	-	97	57.082	ENSPFOG00000000610	rpp30	86	57.082	Poecilia_formosa
ENSCGRG00001017068	-	97	56.897	ENSPLAG00000003728	rpp30	80	56.897	Poecilia_latipinna
ENSCGRG00001017068	-	97	55.794	ENSPMEG00000015692	rpp30	86	55.794	Poecilia_mexicana
ENSCGRG00001017068	-	97	56.652	ENSPREG00000001536	rpp30	86	56.652	Poecilia_reticulata
ENSCGRG00001017068	-	97	93.103	ENSPPYG00000002473	RPP30	87	93.103	Pongo_abelii
ENSCGRG00001017068	-	97	58.498	ENSPCAG00000016930	RPP30	88	58.498	Procavia_capensis
ENSCGRG00001017068	-	97	93.103	ENSPCOG00000017865	RPP30	87	93.103	Propithecus_coquereli
ENSCGRG00001017068	-	97	84.252	ENSPVAG00000010524	RPP30	83	84.252	Pteropus_vampyrus
ENSCGRG00001017068	-	97	46.352	ENSPNYG00000016930	-	79	46.352	Pundamilia_nyererei
ENSCGRG00001017068	-	97	61.638	ENSPNAG00000014804	rpp30	86	61.638	Pygocentrus_nattereri
ENSCGRG00001017068	-	97	97.845	ENSRNOG00000018718	Rpp30	87	97.845	Rattus_norvegicus
ENSCGRG00001017068	-	97	88.362	ENSRBIG00000036948	RPP30	74	88.362	Rhinopithecus_bieti
ENSCGRG00001017068	-	91	30.942	YHR062C	-	74	30.942	Saccharomyces_cerevisiae
ENSCGRG00001017068	-	97	69.957	ENSSBOG00000025405	RPP30	76	69.957	Saimiri_boliviensis_boliviensis
ENSCGRG00001017068	-	97	82.051	ENSSHAG00000007452	RPP30	87	82.051	Sarcophilus_harrisii
ENSCGRG00001017068	-	97	63.793	ENSSFOG00015012510	rpp30	86	63.793	Scleropages_formosus
ENSCGRG00001017068	-	97	58.369	ENSSMAG00000013854	rpp30	85	58.369	Scophthalmus_maximus
ENSCGRG00001017068	-	97	58.798	ENSSDUG00000015086	rpp30	84	58.798	Seriola_dumerili
ENSCGRG00001017068	-	98	52.542	ENSSLDG00000021234	rpp30	92	52.542	Seriola_lalandi_dorsalis
ENSCGRG00001017068	-	97	90.517	ENSSARG00000007110	RPP30	87	90.517	Sorex_araneus
ENSCGRG00001017068	-	82	66.497	ENSSPUG00000000595	RPP30	84	71.311	Sphenodon_punctatus
ENSCGRG00001017068	-	97	90.517	ENSSSCG00000010460	RPP30	87	90.517	Sus_scrofa
ENSCGRG00001017068	-	86	78.049	ENSTGUG00000008399	RPP30	82	78.049	Taeniopygia_guttata
ENSCGRG00001017068	-	60	40.559	ENSTRUG00000020711	-	57	40.559	Takifugu_rubripes
ENSCGRG00001017068	-	97	56.723	ENSTNIG00000018540	rpp30	83	56.723	Tetraodon_nigroviridis
ENSCGRG00001017068	-	78	91.398	ENSTBEG00000010734	RPP30	84	91.398	Tupaia_belangeri
ENSCGRG00001017068	-	86	80.976	ENSTTRG00000014708	RPP30	77	80.976	Tursiops_truncatus
ENSCGRG00001017068	-	77	93.443	ENSUAMG00000001045	RPP30	90	93.443	Ursus_americanus
ENSCGRG00001017068	-	97	93.534	ENSUMAG00000000971	RPP30	87	93.534	Ursus_maritimus
ENSCGRG00001017068	-	97	74.409	ENSVPAG00000002077	RPP30	89	74.409	Vicugna_pacos
ENSCGRG00001017068	-	97	81.897	ENSVVUG00000021784	RPP30	86	81.897	Vulpes_vulpes
ENSCGRG00001017068	-	86	73.659	ENSXETG00000021785	rpp30	76	73.659	Xenopus_tropicalis
ENSCGRG00001017068	-	97	53.648	ENSXCOG00000017864	rpp30	85	53.648	Xiphophorus_couchianus