EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00001017212 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Minus strand
Length: 1074 bases
Position: chrscaffold_40:5800729-5801802
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001017072	RRM_1	PF00076.22	6.8e-25	1	2
ENSCGRP00001017072	RRM_1	PF00076.22	6.8e-25	2	2
ENSCGRP00001017067	RRM_1	PF00076.22	7.3e-25	1	2
ENSCGRP00001017067	RRM_1	PF00076.22	7.3e-25	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001021316	-	933	-	ENSCGRP00001017072	310 (aa)	-	-
ENSCGRT00001021311	-	954	-	ENSCGRP00001017067	317 (aa)	-	-

Gene Model

Click here to download ENSCGRG00001017212's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001017212's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00001017212	-	66	34.361	ENSCGRG00001005044	Hnrnpab	56	38.690
ENSCGRG00001017212	-	89	65.909	ENSCGRG00001024501	-	67	47.465
ENSCGRG00001017212	-	66	91.935	ENSCGRG00001000079	-	60	78.882
ENSCGRG00001017212	-	50	83.832	ENSCGRG00001018034	-	50	83.832
ENSCGRG00001017212	-	90	52.805	ENSCGRG00001022416	-	59	69.643
ENSCGRG00001017212	-	92	57.931	ENSCGRG00001000756	-	62	57.407
ENSCGRG00001017212	-	74	34.127	ENSCGRG00001014634	Hnrnpd	51	41.615
ENSCGRG00001017212	-	87	51.282	ENSCGRG00001012459	-	100	53.795
ENSCGRG00001017212	-	89	67.687	ENSCGRG00001008592	Hnrnpa3	94	82.303

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001017212	-	91	70.000	ENSCAFG00000017180	-	52	69.939	Canis_familiaris
ENSCGRG00001017212	-	90	53.041	ENSCAFG00000006327	-	52	70.238	Canis_familiaris
ENSCGRG00001017212	-	76	49.818	ENSDNOG00000048335	-	54	58.084	Dasypus_novemcinctus
ENSCGRG00001017212	-	50	51.163	ENSETEG00000010244	-	63	51.479	Echinops_telfairi
ENSCGRG00001017212	-	57	49.479	ENSETEG00000004129	-	60	53.988	Echinops_telfairi
ENSCGRG00001017212	-	89	48.185	ENSHGLG00100017719	-	53	67.114	Heterocephalus_glaber_male
ENSCGRG00001017212	-	80	37.919	ENSSTOG00000034519	-	53	43.827	Ictidomys_tridecemlineatus
ENSCGRG00001017212	-	64	54.717	ENSMPUG00000008269	-	63	67.485	Mustela_putorius_furo
ENSCGRG00001017212	-	90	55.082	ENSMPUG00000003127	-	50	68.072	Mustela_putorius_furo
ENSCGRG00001017212	-	97	48.125	ENSPTIG00000013949	-	52	61.392	Panthera_tigris_altaica