EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCGRG00001017308 (Gene tree)
Gene ID: -
Gene Symbol: Pop1
Alias: 4932434G09Rik
Full Name: POP1 homolog%2C ribonuclease P/MRP subunit
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Minus strand
Length: 25786 bases
Position: chrscaffold_34:16249774-16275559
Accession: 100754990
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001017235	POP1	PF06978.11	4.6e-37	1	2
ENSCGRP00001017235	POP1	PF06978.11	4.6e-37	2	2
ENSCGRP00001017232	POP1	PF06978.11	5.2e-37	1	2
ENSCGRP00001017232	POP1	PF06978.11	5.2e-37	2	2
ENSCGRP00001017235	POPLD	PF08170.12	2.7e-26	1	1
ENSCGRP00001017232	POPLD	PF08170.12	2.8e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001021476	-	3117	-	ENSCGRP00001017232	1038 (aa)	-	-
ENSCGRT00001021479	-	3027	XM_016971321	ENSCGRP00001017235	1008 (aa)	XP_016826810	-

Gene Model

Click here to download ENSCGRG00001017308's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001017308's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001017308	Pop1	100	76.465	ENSG00000104356	POP1	100	82.514	Homo_sapiens
ENSCGRG00001017308	Pop1	100	47.172	ENSAPOG00000008198	pop1	100	46.692	Acanthochromis_polyacanthus
ENSCGRG00001017308	Pop1	100	74.270	ENSAMEG00000000556	POP1	100	74.270	Ailuropoda_melanoleuca
ENSCGRG00001017308	Pop1	90	49.251	ENSACIG00000004169	POP1	92	49.134	Amphilophus_citrinellus
ENSCGRG00001017308	Pop1	100	46.660	ENSAOCG00000010991	pop1	100	46.463	Amphiprion_ocellaris
ENSCGRG00001017308	Pop1	90	46.865	ENSAPEG00000007607	pop1	94	47.953	Amphiprion_percula
ENSCGRG00001017308	Pop1	100	45.541	ENSATEG00000024814	POP1	100	45.758	Anabas_testudineus
ENSCGRG00001017308	Pop1	92	59.788	ENSAPLG00000014418	POP1	99	60.042	Anas_platyrhynchos
ENSCGRG00001017308	Pop1	99	53.131	ENSACAG00000016083	POP1	100	53.475	Anolis_carolinensis
ENSCGRG00001017308	Pop1	88	84.226	ENSANAG00000026360	POP1	99	83.631	Aotus_nancymaae
ENSCGRG00001017308	Pop1	100	47.278	ENSACLG00000010951	pop1	100	47.564	Astatotilapia_calliptera
ENSCGRG00001017308	Pop1	100	45.116	ENSAMXG00000014483	POP1	100	44.641	Astyanax_mexicanus
ENSCGRG00001017308	Pop1	100	73.145	ENSBTAG00000012596	POP1	100	73.242	Bos_taurus
ENSCGRG00001017308	Pop1	100	75.684	ENSCJAG00000015567	POP1	100	76.000	Callithrix_jacchus
ENSCGRG00001017308	Pop1	100	74.209	ENSCAFG00000000469	POP1	100	74.209	Canis_familiaris
ENSCGRG00001017308	Pop1	100	73.535	ENSCAFG00020026765	POP1	100	73.535	Canis_lupus_dingo
ENSCGRG00001017308	Pop1	100	73.021	ENSCHIG00000017066	POP1	100	73.171	Capra_hircus
ENSCGRG00001017308	Pop1	100	75.610	ENSTSYG00000003097	POP1	100	75.610	Carlito_syrichta
ENSCGRG00001017308	Pop1	100	73.444	ENSCAPG00000007251	POP1	100	73.515	Cavia_aperea
ENSCGRG00001017308	Pop1	100	75.832	ENSCPOG00000002901	POP1	100	75.930	Cavia_porcellus
ENSCGRG00001017308	Pop1	100	75.805	ENSCCAG00000018939	POP1	100	75.805	Cebus_capucinus
ENSCGRG00001017308	Pop1	100	76.488	ENSCATG00000040916	POP1	100	76.488	Cercocebus_atys
ENSCGRG00001017308	Pop1	100	77.397	ENSCLAG00000007208	POP1	97	77.397	Chinchilla_lanigera
ENSCGRG00001017308	Pop1	90	75.922	ENSCSAG00000012340	POP1	98	76.425	Chlorocebus_sabaeus
ENSCGRG00001017308	Pop1	95	72.737	ENSCHOG00000011432	POP1	96	79.281	Choloepus_hoffmanni
ENSCGRG00001017308	Pop1	100	62.500	ENSCPBG00000006373	POP1	100	62.891	Chrysemys_picta_bellii
ENSCGRG00001017308	Pop1	82	35.798	ENSCING00000008323	-	89	35.798	Ciona_intestinalis
ENSCGRG00001017308	Pop1	100	76.780	ENSCANG00000001647	POP1	100	76.780	Colobus_angolensis_palliatus
ENSCGRG00001017308	Pop1	100	93.256	ENSCGRG00000010824	Pop1	100	93.256	Cricetulus_griseus_crigri
ENSCGRG00001017308	Pop1	100	45.096	ENSCSEG00000008737	POP1	100	44.712	Cynoglossus_semilaevis
ENSCGRG00001017308	Pop1	100	46.146	ENSCVAG00000022248	pop1	100	46.280	Cyprinodon_variegatus
ENSCGRG00001017308	Pop1	100	72.150	ENSDNOG00000019974	POP1	100	72.150	Dasypus_novemcinctus
ENSCGRG00001017308	Pop1	100	67.366	ENSDORG00000015384	Pop1	100	67.366	Dipodomys_ordii
ENSCGRG00001017308	Pop1	62	33.853	FBgn0026702	l(1)G0045	71	33.691	Drosophila_melanogaster
ENSCGRG00001017308	Pop1	88	67.895	ENSETEG00000007839	POP1	88	67.895	Echinops_telfairi
ENSCGRG00001017308	Pop1	100	75.317	ENSEASG00005003189	POP1	98	75.317	Equus_asinus_asinus
ENSCGRG00001017308	Pop1	100	74.732	ENSECAG00000024236	POP1	100	74.732	Equus_caballus
ENSCGRG00001017308	Pop1	67	67.699	ENSEEUG00000003050	-	70	67.699	Erinaceus_europaeus
ENSCGRG00001017308	Pop1	100	46.236	ENSELUG00000003526	pop1	100	47.328	Esox_lucius
ENSCGRG00001017308	Pop1	100	75.512	ENSFCAG00000002168	POP1	100	75.512	Felis_catus
ENSCGRG00001017308	Pop1	100	57.493	ENSFALG00000005711	POP1	100	57.255	Ficedula_albicollis
ENSCGRG00001017308	Pop1	100	76.614	ENSFDAG00000017068	POP1	100	76.614	Fukomys_damarensis
ENSCGRG00001017308	Pop1	100	46.154	ENSFHEG00000019518	pop1	100	46.191	Fundulus_heteroclitus
ENSCGRG00001017308	Pop1	93	44.799	ENSGMOG00000000659	POP1	98	44.902	Gadus_morhua
ENSCGRG00001017308	Pop1	100	46.777	ENSGAFG00000019770	POP1	100	46.394	Gambusia_affinis
ENSCGRG00001017308	Pop1	100	44.785	ENSGACG00000003499	pop1	100	44.785	Gasterosteus_aculeatus
ENSCGRG00001017308	Pop1	100	61.359	ENSGAGG00000011737	POP1	98	61.203	Gopherus_agassizii
ENSCGRG00001017308	Pop1	100	76.780	ENSGGOG00000003176	POP1	100	76.780	Gorilla_gorilla
ENSCGRG00001017308	Pop1	100	47.368	ENSHBUG00000021583	pop1	100	47.464	Haplochromis_burtoni
ENSCGRG00001017308	Pop1	100	75.781	ENSHGLG00000006029	POP1	100	75.781	Heterocephalus_glaber_female
ENSCGRG00001017308	Pop1	100	75.781	ENSHGLG00100016879	POP1	100	75.781	Heterocephalus_glaber_male
ENSCGRG00001017308	Pop1	90	48.283	ENSHCOG00000013888	pop1	95	47.859	Hippocampus_comes
ENSCGRG00001017308	Pop1	100	44.764	ENSIPUG00000018336	pop1	100	43.293	Ictalurus_punctatus
ENSCGRG00001017308	Pop1	100	78.474	ENSSTOG00000011455	POP1	97	78.474	Ictidomys_tridecemlineatus
ENSCGRG00001017308	Pop1	100	75.148	ENSJJAG00000013325	Pop1	100	75.148	Jaculus_jaculus
ENSCGRG00001017308	Pop1	100	46.893	ENSKMAG00000001346	POP1	100	46.602	Kryptolebias_marmoratus
ENSCGRG00001017308	Pop1	89	48.026	ENSLBEG00000024457	POP1	93	47.802	Labrus_bergylta
ENSCGRG00001017308	Pop1	93	55.703	ENSLACG00000012498	POP1	100	55.601	Latimeria_chalumnae
ENSCGRG00001017308	Pop1	100	50.146	ENSLOCG00000009817	POP1	100	49.615	Lepisosteus_oculatus
ENSCGRG00001017308	Pop1	100	76.159	ENSLAFG00000010770	POP1	100	76.159	Loxodonta_africana
ENSCGRG00001017308	Pop1	100	76.683	ENSMFAG00000000347	POP1	100	76.683	Macaca_fascicularis
ENSCGRG00001017308	Pop1	100	76.488	ENSMNEG00000036870	POP1	100	76.488	Macaca_nemestrina
ENSCGRG00001017308	Pop1	100	76.488	ENSMLEG00000034986	POP1	100	76.488	Mandrillus_leucophaeus
ENSCGRG00001017308	Pop1	100	47.031	ENSMAMG00000004040	pop1	100	46.293	Mastacembelus_armatus
ENSCGRG00001017308	Pop1	100	47.751	ENSMZEG00005025448	pop1	100	47.847	Maylandia_zebra
ENSCGRG00001017308	Pop1	100	57.293	ENSMGAG00000012167	POP1	100	57.429	Meleagris_gallopavo
ENSCGRG00001017308	Pop1	100	90.891	ENSMAUG00000017537	Pop1	100	90.396	Mesocricetus_auratus
ENSCGRG00001017308	Pop1	100	76.758	ENSMICG00000004361	POP1	100	76.758	Microcebus_murinus
ENSCGRG00001017308	Pop1	100	84.729	ENSMOCG00000006356	Pop1	100	84.926	Microtus_ochrogaster
ENSCGRG00001017308	Pop1	100	42.871	ENSMMOG00000018242	pop1	100	42.871	Mola_mola
ENSCGRG00001017308	Pop1	100	64.341	ENSMODG00000006561	POP1	100	63.330	Monodelphis_domestica
ENSCGRG00001017308	Pop1	100	46.494	ENSMALG00000012621	POP1	100	46.815	Monopterus_albus
ENSCGRG00001017308	Pop1	100	84.154	MGP_CAROLIEiJ_G0019726	Pop1	100	84.154	Mus_caroli
ENSCGRG00001017308	Pop1	100	84.350	ENSMUSG00000022325	Pop1	100	84.350	Mus_musculus
ENSCGRG00001017308	Pop1	100	84.600	MGP_PahariEiJ_G0019735	Pop1	100	84.600	Mus_pahari
ENSCGRG00001017308	Pop1	100	84.055	MGP_SPRETEiJ_G0020622	Pop1	100	84.055	Mus_spretus
ENSCGRG00001017308	Pop1	100	73.541	ENSMPUG00000015250	POP1	100	73.541	Mustela_putorius_furo
ENSCGRG00001017308	Pop1	100	69.951	ENSMLUG00000010204	POP1	100	70.468	Myotis_lucifugus
ENSCGRG00001017308	Pop1	100	82.059	ENSNGAG00000001582	Pop1	100	82.059	Nannospalax_galili
ENSCGRG00001017308	Pop1	89	48.310	ENSNBRG00000002356	pop1	93	48.310	Neolamprologus_brichardi
ENSCGRG00001017308	Pop1	100	76.585	ENSNLEG00000002541	POP1	100	76.585	Nomascus_leucogenys
ENSCGRG00001017308	Pop1	92	57.188	ENSMEUG00000003118	POP1	97	57.294	Notamacropus_eugenii
ENSCGRG00001017308	Pop1	100	73.084	ENSOPRG00000007667	POP1	100	72.593	Ochotona_princeps
ENSCGRG00001017308	Pop1	100	75.000	ENSODEG00000003984	POP1	100	75.000	Octodon_degus
ENSCGRG00001017308	Pop1	100	47.368	ENSONIG00000016445	pop1	100	47.358	Oreochromis_niloticus
ENSCGRG00001017308	Pop1	62	68.902	ENSOANG00000001278	-	94	68.293	Ornithorhynchus_anatinus
ENSCGRG00001017308	Pop1	100	72.692	ENSOCUG00000017400	POP1	100	73.107	Oryctolagus_cuniculus
ENSCGRG00001017308	Pop1	92	48.514	ENSORLG00000002839	pop1	100	46.289	Oryzias_latipes
ENSCGRG00001017308	Pop1	91	47.543	ENSORLG00020022450	POP1	95	48.031	Oryzias_latipes_hni
ENSCGRG00001017308	Pop1	92	48.247	ENSORLG00015012746	POP1	100	46.094	Oryzias_latipes_hsok
ENSCGRG00001017308	Pop1	100	46.562	ENSOMEG00000006915	pop1	99	46.169	Oryzias_melastigma
ENSCGRG00001017308	Pop1	100	74.291	ENSOGAG00000001466	POP1	100	74.291	Otolemur_garnettii
ENSCGRG00001017308	Pop1	100	76.367	ENSPPAG00000018410	POP1	100	76.878	Pan_paniscus
ENSCGRG00001017308	Pop1	100	75.146	ENSPPRG00000005002	POP1	100	75.146	Panthera_pardus
ENSCGRG00001017308	Pop1	100	75.341	ENSPTIG00000016527	POP1	100	75.341	Panthera_tigris_altaica
ENSCGRG00001017308	Pop1	100	76.367	ENSPTRG00000020458	POP1	100	76.878	Pan_troglodytes
ENSCGRG00001017308	Pop1	100	76.780	ENSPANG00000009704	POP1	100	76.780	Papio_anubis
ENSCGRG00001017308	Pop1	100	49.029	ENSPKIG00000016325	POP1	100	49.029	Paramormyrops_kingsleyae
ENSCGRG00001017308	Pop1	100	61.560	ENSPSIG00000012343	POP1	100	61.465	Pelodiscus_sinensis
ENSCGRG00001017308	Pop1	90	48.906	ENSPMGG00000022253	POP1	94	48.436	Periophthalmus_magnuspinnatus
ENSCGRG00001017308	Pop1	99	86.794	ENSPEMG00000023633	Pop1	100	86.794	Peromyscus_maniculatus_bairdii
ENSCGRG00001017308	Pop1	90	43.565	ENSPMAG00000003209	POP1	99	43.116	Petromyzon_marinus
ENSCGRG00001017308	Pop1	100	62.852	ENSPCIG00000012216	POP1	100	62.669	Phascolarctos_cinereus
ENSCGRG00001017308	Pop1	100	46.525	ENSPFOG00000012490	POP1	100	46.332	Poecilia_formosa
ENSCGRG00001017308	Pop1	100	46.332	ENSPLAG00000004646	POP1	100	46.139	Poecilia_latipinna
ENSCGRG00001017308	Pop1	100	46.429	ENSPMEG00000019592	POP1	100	46.236	Poecilia_mexicana
ENSCGRG00001017308	Pop1	100	46.453	ENSPREG00000020951	POP1	100	46.356	Poecilia_reticulata
ENSCGRG00001017308	Pop1	100	76.585	ENSPPYG00000018777	POP1	100	76.585	Pongo_abelii
ENSCGRG00001017308	Pop1	100	70.117	ENSPCAG00000016662	POP1	100	70.117	Procavia_capensis
ENSCGRG00001017308	Pop1	100	77.148	ENSPCOG00000019420	POP1	100	77.148	Propithecus_coquereli
ENSCGRG00001017308	Pop1	100	74.854	ENSPVAG00000014468	POP1	100	74.951	Pteropus_vampyrus
ENSCGRG00001017308	Pop1	89	48.246	ENSPNYG00000004476	pop1	94	48.246	Pundamilia_nyererei
ENSCGRG00001017308	Pop1	100	43.178	ENSPNAG00000000265	pop1	100	42.670	Pygocentrus_nattereri
ENSCGRG00001017308	Pop1	100	84.744	ENSRNOG00000005243	Pop1	100	84.744	Rattus_norvegicus
ENSCGRG00001017308	Pop1	100	76.780	ENSRBIG00000007996	POP1	100	76.780	Rhinopithecus_bieti
ENSCGRG00001017308	Pop1	100	76.780	ENSRROG00000012334	POP1	100	76.780	Rhinopithecus_roxellana
ENSCGRG00001017308	Pop1	99	76.680	ENSSBOG00000020830	POP1	100	76.680	Saimiri_boliviensis_boliviensis
ENSCGRG00001017308	Pop1	100	63.060	ENSSHAG00000000296	POP1	100	62.780	Sarcophilus_harrisii
ENSCGRG00001017308	Pop1	100	47.476	ENSSFOG00015007429	pop1	99	47.379	Scleropages_formosus
ENSCGRG00001017308	Pop1	85	50.940	ENSSMAG00000010467	POP1	97	47.128	Scophthalmus_maximus
ENSCGRG00001017308	Pop1	100	45.750	ENSSDUG00000007817	POP1	100	46.293	Seriola_dumerili
ENSCGRG00001017308	Pop1	100	45.845	ENSSLDG00000012565	POP1	100	46.578	Seriola_lalandi_dorsalis
ENSCGRG00001017308	Pop1	100	56.360	ENSSPUG00000003550	-	100	56.074	Sphenodon_punctatus
ENSCGRG00001017308	Pop1	90	49.075	ENSSPAG00000014955	pop1	93	48.845	Stegastes_partitus
ENSCGRG00001017308	Pop1	100	74.460	ENSSSCG00000006078	POP1	100	74.460	Sus_scrofa
ENSCGRG00001017308	Pop1	92	55.121	ENSTGUG00000012011	-	100	55.121	Taeniopygia_guttata
ENSCGRG00001017308	Pop1	89	47.420	ENSTRUG00000010856	pop1	92	46.608	Takifugu_rubripes
ENSCGRG00001017308	Pop1	93	47.472	ENSTNIG00000013297	pop1	100	47.472	Tetraodon_nigroviridis
ENSCGRG00001017308	Pop1	95	72.774	ENSTBEG00000014214	POP1	99	72.774	Tupaia_belangeri
ENSCGRG00001017308	Pop1	100	73.561	ENSTTRG00000016071	POP1	100	73.366	Tursiops_truncatus
ENSCGRG00001017308	Pop1	99	71.992	ENSUAMG00000017309	POP1	100	71.992	Ursus_americanus
ENSCGRG00001017308	Pop1	91	85.425	ENSUMAG00000016952	POP1	100	85.425	Ursus_maritimus
ENSCGRG00001017308	Pop1	83	82.482	ENSVPAG00000008278	POP1	82	82.482	Vicugna_pacos
ENSCGRG00001017308	Pop1	100	73.828	ENSVVUG00000010994	POP1	100	73.828	Vulpes_vulpes
ENSCGRG00001017308	Pop1	100	41.867	ENSXCOG00000017043	POP1	100	41.356	Xiphophorus_couchianus
ENSCGRG00001017308	Pop1	100	45.998	ENSXMAG00000002472	POP1	100	45.857	Xiphophorus_maculatus