EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00001017315 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Plus strand
Length: 4609 bases
Position: chrscaffold_55:2079891-2084499
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001017226	ResIII	PF04851.15	5.8e-08	1	1
ENSCGRP00001017230	ResIII	PF04851.15	6.2e-06	1	1
ENSCGRP00001017226	DEAD	PF00270.29	3.6e-39	1	1
ENSCGRP00001017230	DEAD	PF00270.29	3e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001021474	-	651	-	ENSCGRP00001017230	216 (aa)	-	-
ENSCGRT00001021470	-	840	-	ENSCGRP00001017226	279 (aa)	-	-

Gene Model

Click here to download ENSCGRG00001017315's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001017315's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00001017315	-	74	43.396	ENSCGRG00001022442	Eif4a2	54	41.206
ENSCGRG00001017315	-	79	35.057	ENSCGRG00001015299	Ddx19b	50	33.333
ENSCGRG00001017315	-	84	39.560	ENSCGRG00001009326	Eif4a1	54	37.668
ENSCGRG00001017315	-	95	87.379	ENSCGRG00001001611	Ddx39	57	88.571
ENSCGRG00001017315	-	73	38.854	ENSCGRG00001024111	-	52	36.683
ENSCGRG00001017315	-	73	35.443	ENSCGRG00001018048	-	50	34.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001017315	-	95	99.029	ENSG00000198563	DDX39B	100	99.160	Homo_sapiens
ENSCGRG00001017315	-	95	98.544	ENSAMEG00000009508	DDX39B	57	98.776	Ailuropoda_melanoleuca
ENSCGRG00001017315	-	95	89.524	ENSACIG00000004534	ddx39b	57	91.165	Amphilophus_citrinellus
ENSCGRG00001017315	-	95	88.571	ENSATEG00000012366	ddx39b	58	90.361	Anabas_testudineus
ENSCGRG00001017315	-	95	94.660	ENSACAG00000012240	DDX39B	57	95.510	Anolis_carolinensis
ENSCGRG00001017315	-	95	99.029	ENSANAG00000030372	DDX39B	57	99.184	Aotus_nancymaae
ENSCGRG00001017315	-	95	87.324	ENSACLG00000018759	ddx39b	58	89.286	Astatotilapia_calliptera
ENSCGRG00001017315	-	95	87.383	ENSAMXG00000017837	ddx39b	58	89.328	Astyanax_mexicanus
ENSCGRG00001017315	-	95	98.544	ENSBTAG00000014490	DDX39B	57	98.776	Bos_taurus
ENSCGRG00001017315	-	95	99.029	ENSCJAG00000003152	DDX39B	57	99.184	Callithrix_jacchus
ENSCGRG00001017315	-	95	98.544	ENSCAFG00000000509	DDX39B	57	98.776	Canis_familiaris
ENSCGRG00001017315	-	95	98.544	ENSCAFG00020020530	DDX39B	57	98.776	Canis_lupus_dingo
ENSCGRG00001017315	-	95	98.544	ENSCHIG00000004579	DDX39B	57	98.776	Capra_hircus
ENSCGRG00001017315	-	98	85.648	ENSTSYG00000029741	-	94	85.648	Carlito_syrichta
ENSCGRG00001017315	-	95	99.029	ENSTSYG00000010226	-	57	99.184	Carlito_syrichta
ENSCGRG00001017315	-	95	99.029	ENSCAPG00000010066	DDX39B	57	98.776	Cavia_aperea
ENSCGRG00001017315	-	95	99.029	ENSCPOG00000002335	DDX39B	57	98.776	Cavia_porcellus
ENSCGRG00001017315	-	95	99.029	ENSCCAG00000027897	DDX39B	58	99.184	Cebus_capucinus
ENSCGRG00001017315	-	95	93.204	ENSCATG00000043709	DDX39B	58	92.245	Cercocebus_atys
ENSCGRG00001017315	-	95	99.029	ENSCLAG00000014555	DDX39B	57	98.776	Chinchilla_lanigera
ENSCGRG00001017315	-	95	99.029	ENSCSAG00000008517	DDX39B	58	99.184	Chlorocebus_sabaeus
ENSCGRG00001017315	-	95	99.029	ENSCANG00000041217	DDX39B	83	98.872	Colobus_angolensis_palliatus
ENSCGRG00001017315	-	95	100.000	ENSCGRG00000012479	-	83	100.000	Cricetulus_griseus_crigri
ENSCGRG00001017315	-	95	99.512	ENSCGRG00000000078	-	90	99.512	Cricetulus_griseus_crigri
ENSCGRG00001017315	-	95	86.385	ENSDARG00000036069	ddx39b	58	88.889	Danio_rerio
ENSCGRG00001017315	-	95	99.029	ENSDNOG00000010215	DDX39B	57	99.184	Dasypus_novemcinctus
ENSCGRG00001017315	-	95	98.544	ENSDORG00000004985	Ddx39b	66	98.776	Dipodomys_ordii
ENSCGRG00001017315	-	95	97.573	ENSETEG00000009649	DDX39B	57	97.143	Echinops_telfairi
ENSCGRG00001017315	-	95	99.029	ENSEASG00005017156	DDX39B	57	99.184	Equus_asinus_asinus
ENSCGRG00001017315	-	95	99.029	ENSECAG00000007750	DDX39B	58	99.184	Equus_caballus
ENSCGRG00001017315	-	95	86.603	ENSELUG00000017904	ddx39b	57	88.306	Esox_lucius
ENSCGRG00001017315	-	95	98.544	ENSFCAG00000004497	DDX39B	57	98.776	Felis_catus
ENSCGRG00001017315	-	95	99.029	ENSFDAG00000011074	DDX39B	57	98.776	Fukomys_damarensis
ENSCGRG00001017315	-	95	99.029	ENSGGOG00000005989	DDX39B	83	98.872	Gorilla_gorilla
ENSCGRG00001017315	-	98	87.907	ENSHBUG00000022054	-	79	87.907	Haplochromis_burtoni
ENSCGRG00001017315	-	95	98.058	ENSHGLG00000019248	DDX39B	57	97.959	Heterocephalus_glaber_female
ENSCGRG00001017315	-	95	98.058	ENSHGLG00100011850	DDX39B	57	97.959	Heterocephalus_glaber_male
ENSCGRG00001017315	-	95	85.047	ENSIPUG00000015733	DDX39B	61	87.795	Ictalurus_punctatus
ENSCGRG00001017315	-	95	98.544	ENSSTOG00000012838	DDX39B	57	98.367	Ictidomys_tridecemlineatus
ENSCGRG00001017315	-	95	98.544	ENSJJAG00000005660	-	57	98.776	Jaculus_jaculus
ENSCGRG00001017315	-	95	74.757	ENSLBEG00000017177	-	92	72.075	Labrus_bergylta
ENSCGRG00001017315	-	95	74.272	ENSLBEG00000012254	ddx39b	57	73.896	Labrus_bergylta
ENSCGRG00001017315	-	95	79.245	ENSLACG00000002110	DDX39B	58	82.470	Latimeria_chalumnae
ENSCGRG00001017315	-	95	99.029	ENSLAFG00000014202	DDX39B	95	98.790	Loxodonta_africana
ENSCGRG00001017315	-	95	99.029	ENSMFAG00000034233	DDX39B	83	98.872	Macaca_fascicularis
ENSCGRG00001017315	-	95	99.029	ENSMMUG00000008839	DDX39B	83	98.872	Macaca_mulatta
ENSCGRG00001017315	-	95	99.029	ENSMNEG00000041059	DDX39B	83	98.872	Macaca_nemestrina
ENSCGRG00001017315	-	95	99.029	ENSMLEG00000043791	DDX39B	83	98.872	Mandrillus_leucophaeus
ENSCGRG00001017315	-	95	87.324	ENSMZEG00005017654	ddx39b	58	89.286	Maylandia_zebra
ENSCGRG00001017315	-	95	100.000	ENSMAUG00000008059	Ddx39b	57	100.000	Mesocricetus_auratus
ENSCGRG00001017315	-	95	99.029	ENSMICG00000017349	DDX39B	57	99.184	Microcebus_murinus
ENSCGRG00001017315	-	95	100.000	ENSMOCG00000011169	Ddx39b	57	100.000	Microtus_ochrogaster
ENSCGRG00001017315	-	95	99.029	ENSMODG00000015791	DDX39B	58	99.184	Monodelphis_domestica
ENSCGRG00001017315	-	83	97.765	MGP_CAROLIEiJ_G0021519	-	97	97.765	Mus_caroli
ENSCGRG00001017315	-	95	99.029	ENSMUSG00000019432	Ddx39b	100	99.324	Mus_musculus
ENSCGRG00001017315	-	95	99.029	MGP_PahariEiJ_G0020513	Ddx39b	100	99.324	Mus_pahari
ENSCGRG00001017315	-	95	99.245	MGP_SPRETEiJ_G0022424	Ddx39b	82	99.245	Mus_spretus
ENSCGRG00001017315	-	95	98.544	ENSMPUG00000011407	DDX39B	57	98.776	Mustela_putorius_furo
ENSCGRG00001017315	-	95	99.029	ENSNGAG00000022948	Ddx39b	57	99.184	Nannospalax_galili
ENSCGRG00001017315	-	95	98.544	ENSOPRG00000011923	DDX39B	57	98.776	Ochotona_princeps
ENSCGRG00001017315	-	95	98.544	ENSODEG00000018083	DDX39B	57	98.367	Octodon_degus
ENSCGRG00001017315	-	95	88.571	ENSONIG00000004740	ddx39b	58	90.361	Oreochromis_niloticus
ENSCGRG00001017315	-	95	99.029	ENSOANG00000008361	DDX39B	95	98.312	Ornithorhynchus_anatinus
ENSCGRG00001017315	-	95	91.403	ENSOCUG00000024126	DDX39B	59	92.692	Oryctolagus_cuniculus
ENSCGRG00001017315	-	95	97.101	ENSOGAG00000028850	-	57	97.561	Otolemur_garnettii
ENSCGRG00001017315	-	95	98.544	ENSOARG00000008787	DDX39B	56	98.776	Ovis_aries
ENSCGRG00001017315	-	95	99.029	ENSPPAG00000043072	DDX39B	57	99.184	Pan_paniscus
ENSCGRG00001017315	-	95	98.544	ENSPPRG00000001913	DDX39B	57	98.776	Panthera_pardus
ENSCGRG00001017315	-	95	97.087	ENSPTIG00000017669	DDX39B	57	97.143	Panthera_tigris_altaica
ENSCGRG00001017315	-	95	99.029	ENSPTRG00000032509	DDX39B	57	99.184	Pan_troglodytes
ENSCGRG00001017315	-	95	99.029	ENSPANG00000018609	DDX39B	83	98.872	Papio_anubis
ENSCGRG00001017315	-	95	83.256	ENSPKIG00000011324	ddx39b	58	87.008	Paramormyrops_kingsleyae
ENSCGRG00001017315	-	95	99.515	ENSPEMG00000016905	Ddx39b	57	99.592	Peromyscus_maniculatus_bairdii
ENSCGRG00001017315	-	95	99.029	ENSPCIG00000017572	DDX39B	57	99.184	Phascolarctos_cinereus
ENSCGRG00001017315	-	95	99.029	ENSPPYG00000016433	DDX39B	57	99.184	Pongo_abelii
ENSCGRG00001017315	-	95	99.029	ENSPCOG00000018656	DDX39B	60	99.184	Propithecus_coquereli
ENSCGRG00001017315	-	95	99.029	ENSPVAG00000004653	DDX39B	57	99.184	Pteropus_vampyrus
ENSCGRG00001017315	-	88	74.297	ENSPNYG00000010382	ddx39b	55	74.297	Pundamilia_nyererei
ENSCGRG00001017315	-	95	85.981	ENSPNAG00000026926	ddx39b	58	88.142	Pygocentrus_nattereri
ENSCGRG00001017315	-	95	99.029	ENSRNOG00000000841	Ddx39b	61	99.184	Rattus_norvegicus
ENSCGRG00001017315	-	95	99.029	ENSRBIG00000031309	DDX39B	84	98.872	Rhinopithecus_bieti
ENSCGRG00001017315	-	95	99.029	ENSRROG00000039517	DDX39B	83	98.872	Rhinopithecus_roxellana
ENSCGRG00001017315	-	68	96.575	ENSSBOG00000030486	-	97	96.575	Saimiri_boliviensis_boliviensis
ENSCGRG00001017315	-	95	99.029	ENSSBOG00000035513	-	83	98.868	Saimiri_boliviensis_boliviensis
ENSCGRG00001017315	-	95	99.029	ENSSHAG00000003209	DDX39B	57	99.184	Sarcophilus_harrisii
ENSCGRG00001017315	-	95	84.186	ENSSFOG00015016107	ddx39b	58	87.795	Scleropages_formosus
ENSCGRG00001017315	-	95	89.048	ENSSDUG00000011557	ddx39b	58	91.165	Seriola_dumerili
ENSCGRG00001017315	-	95	88.571	ENSSLDG00000015763	ddx39b	58	90.763	Seriola_lalandi_dorsalis
ENSCGRG00001017315	-	95	99.029	ENSSARG00000005245	DDX39B	66	99.184	Sorex_araneus
ENSCGRG00001017315	-	95	95.631	ENSSPUG00000012805	DDX39B	57	96.327	Sphenodon_punctatus
ENSCGRG00001017315	-	95	99.029	ENSSSCG00000001400	DDX39B	52	99.184	Sus_scrofa
ENSCGRG00001017315	-	95	81.517	ENSTTRG00000014074	DDX39B	58	84.400	Tursiops_truncatus
ENSCGRG00001017315	-	95	87.594	ENSUAMG00000027335	DDX39B	67	87.594	Ursus_americanus
ENSCGRG00001017315	-	100	85.185	ENSUMAG00000015124	DDX39B	99	85.185	Ursus_maritimus
ENSCGRG00001017315	-	95	98.544	ENSVVUG00000019518	DDX39B	61	98.106	Vulpes_vulpes
ENSCGRG00001017315	-	95	68.269	ENSXETG00000002498	ddx39b	57	73.279	Xenopus_tropicalis