EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCGRG00001017533 (Gene tree)
Gene ID: -
Gene Symbol: Polr1c
Alias: 40kDa|RPA40|Rpo1-1
Full Name: RNA polymerase I and III subunit C
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Minus strand
Length: 4375 bases
Position: chrscaffold_29:22090248-22094622
Accession: 100758205
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001017520	RNA_pol_A_bac	PF01000.26	2.3e-30	1	1
ENSCGRP00001017520	RNA_pol_L	PF01193.24	9.4e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001021764	-	1041	-	ENSCGRP00001017520	346 (aa)	XP_007631147	A0A061IQH8

Gene Model

Click here to download ENSCGRG00001017533's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001017533's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001017533	Polr1c	100	95.376	ENSG00000171453	POLR1C	100	95.376	Homo_sapiens
ENSCGRG00001017533	Polr1c	99	72.206	ENSAPOG00000024356	polr1c	99	72.779	Acanthochromis_polyacanthus
ENSCGRG00001017533	Polr1c	100	94.509	ENSAMEG00000012205	POLR1C	99	94.509	Ailuropoda_melanoleuca
ENSCGRG00001017533	Polr1c	93	62.691	ENSACIG00000016268	polr1c	91	62.538	Amphilophus_citrinellus
ENSCGRG00001017533	Polr1c	99	70.487	ENSAOCG00000011687	polr1c	96	71.060	Amphiprion_ocellaris
ENSCGRG00001017533	Polr1c	99	70.201	ENSAPEG00000002433	polr1c	99	70.774	Amphiprion_percula
ENSCGRG00001017533	Polr1c	99	73.352	ENSATEG00000005985	polr1c	99	73.352	Anabas_testudineus
ENSCGRG00001017533	Polr1c	87	81.000	ENSAPLG00000002908	POLR1C	100	81.000	Anas_platyrhynchos
ENSCGRG00001017533	Polr1c	89	81.107	ENSACAG00000009764	POLR1C	88	81.107	Anolis_carolinensis
ENSCGRG00001017533	Polr1c	100	94.798	ENSANAG00000025805	POLR1C	99	94.798	Aotus_nancymaae
ENSCGRG00001017533	Polr1c	99	71.347	ENSACLG00000006573	polr1c	99	71.920	Astatotilapia_calliptera
ENSCGRG00001017533	Polr1c	60	30.516	ENSACLG00000004854	polr2c	86	30.516	Astatotilapia_calliptera
ENSCGRG00001017533	Polr1c	99	72.464	ENSAMXG00000012062	polr1c	99	72.464	Astyanax_mexicanus
ENSCGRG00001017533	Polr1c	100	94.220	ENSBTAG00000018969	POLR1C	100	94.220	Bos_taurus
ENSCGRG00001017533	Polr1c	97	47.324	WBGene00019275	rpac-40	94	47.324	Caenorhabditis_elegans
ENSCGRG00001017533	Polr1c	100	94.509	ENSCJAG00000005594	POLR1C	100	94.509	Callithrix_jacchus
ENSCGRG00001017533	Polr1c	100	94.509	ENSCAFG00000001872	POLR1C	100	94.509	Canis_familiaris
ENSCGRG00001017533	Polr1c	55	32.821	ENSCAFG00020007660	POLR2C	55	32.821	Canis_lupus_dingo
ENSCGRG00001017533	Polr1c	100	94.509	ENSCAFG00020012018	POLR1C	100	94.509	Canis_lupus_dingo
ENSCGRG00001017533	Polr1c	100	94.236	ENSCHIG00000004352	POLR1C	100	94.236	Capra_hircus
ENSCGRG00001017533	Polr1c	100	95.376	ENSTSYG00000011921	POLR1C	100	95.376	Carlito_syrichta
ENSCGRG00001017533	Polr1c	86	94.314	ENSCAPG00000015364	POLR1C	88	94.314	Cavia_aperea
ENSCGRG00001017533	Polr1c	100	94.798	ENSCPOG00000038098	POLR1C	100	94.798	Cavia_porcellus
ENSCGRG00001017533	Polr1c	100	95.665	ENSCCAG00000020169	POLR1C	100	95.665	Cebus_capucinus
ENSCGRG00001017533	Polr1c	100	94.798	ENSCATG00000044045	POLR1C	100	94.798	Cercocebus_atys
ENSCGRG00001017533	Polr1c	100	95.087	ENSCLAG00000009266	POLR1C	100	95.087	Chinchilla_lanigera
ENSCGRG00001017533	Polr1c	100	93.931	ENSCSAG00000011913	POLR1C	100	93.931	Chlorocebus_sabaeus
ENSCGRG00001017533	Polr1c	61	92.453	ENSCHOG00000006601	POLR1C	100	92.453	Choloepus_hoffmanni
ENSCGRG00001017533	Polr1c	100	84.104	ENSCPBG00000025203	POLR1C	100	84.104	Chrysemys_picta_bellii
ENSCGRG00001017533	Polr1c	99	53.913	ENSCING00000003563	-	99	53.913	Ciona_intestinalis
ENSCGRG00001017533	Polr1c	55	30.653	ENSCSAVG00000002167	-	66	30.653	Ciona_savignyi
ENSCGRG00001017533	Polr1c	100	94.509	ENSCANG00000043167	POLR1C	100	94.509	Colobus_angolensis_palliatus
ENSCGRG00001017533	Polr1c	86	100.000	ENSCGRG00000013225	Polr1c	100	100.000	Cricetulus_griseus_crigri
ENSCGRG00001017533	Polr1c	99	72.464	ENSCSEG00000018097	polr1c	99	72.464	Cynoglossus_semilaevis
ENSCGRG00001017533	Polr1c	55	31.795	ENSCVAG00000017931	polr2c	74	31.795	Cyprinodon_variegatus
ENSCGRG00001017533	Polr1c	61	69.340	ENSCVAG00000005684	polr1c	88	68.950	Cyprinodon_variegatus
ENSCGRG00001017533	Polr1c	100	71.182	ENSDARG00000039400	polr1c	96	71.182	Danio_rerio
ENSCGRG00001017533	Polr1c	100	93.064	ENSDNOG00000042693	POLR1C	100	93.064	Dasypus_novemcinctus
ENSCGRG00001017533	Polr1c	100	94.509	ENSDORG00000000429	Polr1c	100	94.509	Dipodomys_ordii
ENSCGRG00001017533	Polr1c	90	54.140	FBgn0031657	CG3756	93	54.140	Drosophila_melanogaster
ENSCGRG00001017533	Polr1c	100	89.306	ENSETEG00000010807	POLR1C	100	89.306	Echinops_telfairi
ENSCGRG00001017533	Polr1c	99	73.392	ENSEBUG00000013725	polr1c	98	73.392	Eptatretus_burgeri
ENSCGRG00001017533	Polr1c	100	93.642	ENSEASG00005003338	POLR1C	100	93.642	Equus_asinus_asinus
ENSCGRG00001017533	Polr1c	100	93.642	ENSECAG00000023516	POLR1C	98	93.642	Equus_caballus
ENSCGRG00001017533	Polr1c	100	94.798	ENSEEUG00000005471	POLR1C	100	94.798	Erinaceus_europaeus
ENSCGRG00001017533	Polr1c	100	71.758	ENSELUG00000013027	polr1c	100	71.758	Esox_lucius
ENSCGRG00001017533	Polr1c	100	94.220	ENSFCAG00000009735	POLR1C	100	94.220	Felis_catus
ENSCGRG00001017533	Polr1c	55	31.795	ENSFALG00000006931	POLR2C	67	31.795	Ficedula_albicollis
ENSCGRG00001017533	Polr1c	93	81.115	ENSFALG00000012111	POLR1C	100	81.115	Ficedula_albicollis
ENSCGRG00001017533	Polr1c	100	94.509	ENSFDAG00000008428	POLR1C	100	94.509	Fukomys_damarensis
ENSCGRG00001017533	Polr1c	100	61.095	ENSFHEG00000000262	polr1c	100	61.095	Fundulus_heteroclitus
ENSCGRG00001017533	Polr1c	53	66.842	ENSFHEG00000013867	-	93	66.842	Fundulus_heteroclitus
ENSCGRG00001017533	Polr1c	93	71.914	ENSGMOG00000013878	polr1c	100	71.914	Gadus_morhua
ENSCGRG00001017533	Polr1c	100	81.214	ENSGALG00000010349	POLR1C	100	81.214	Gallus_gallus
ENSCGRG00001017533	Polr1c	100	71.225	ENSGAFG00000010153	polr1c	100	71.510	Gambusia_affinis
ENSCGRG00001017533	Polr1c	98	71.221	ENSGACG00000002453	polr1c	98	72.093	Gasterosteus_aculeatus
ENSCGRG00001017533	Polr1c	100	83.526	ENSGAGG00000010640	POLR1C	100	83.526	Gopherus_agassizii
ENSCGRG00001017533	Polr1c	100	95.376	ENSGGOG00000010903	POLR1C	100	95.376	Gorilla_gorilla
ENSCGRG00001017533	Polr1c	99	64.638	ENSHBUG00000017816	polr1c	99	64.638	Haplochromis_burtoni
ENSCGRG00001017533	Polr1c	60	30.516	ENSHBUG00000023040	polr2c	86	30.516	Haplochromis_burtoni
ENSCGRG00001017533	Polr1c	100	93.931	ENSHGLG00000019441	POLR1C	100	93.931	Heterocephalus_glaber_female
ENSCGRG00001017533	Polr1c	100	93.931	ENSHGLG00100005970	POLR1C	100	93.931	Heterocephalus_glaber_male
ENSCGRG00001017533	Polr1c	99	69.364	ENSHCOG00000002179	polr1c	99	69.364	Hippocampus_comes
ENSCGRG00001017533	Polr1c	98	73.669	ENSIPUG00000024464	polr1c	97	73.669	Ictalurus_punctatus
ENSCGRG00001017533	Polr1c	100	95.954	ENSSTOG00000010631	POLR1C	100	95.954	Ictidomys_tridecemlineatus
ENSCGRG00001017533	Polr1c	100	94.798	ENSJJAG00000023110	Polr1c	100	94.798	Jaculus_jaculus
ENSCGRG00001017533	Polr1c	100	70.940	ENSKMAG00000014305	polr1c	97	71.510	Kryptolebias_marmoratus
ENSCGRG00001017533	Polr1c	100	70.085	ENSLBEG00000014925	polr1c	100	70.655	Labrus_bergylta
ENSCGRG00001017533	Polr1c	95	61.145	ENSLACG00000012567	POLR1C	98	61.145	Latimeria_chalumnae
ENSCGRG00001017533	Polr1c	100	74.352	ENSLOCG00000016710	polr1c	96	74.352	Lepisosteus_oculatus
ENSCGRG00001017533	Polr1c	55	32.821	ENSLAFG00000027230	POLR2C	68	32.821	Loxodonta_africana
ENSCGRG00001017533	Polr1c	87	93.355	ENSLAFG00000026248	POLR1C	100	93.355	Loxodonta_africana
ENSCGRG00001017533	Polr1c	100	94.509	ENSMFAG00000046295	POLR1C	100	94.509	Macaca_fascicularis
ENSCGRG00001017533	Polr1c	100	94.509	ENSMMUG00000015192	POLR1C	100	94.509	Macaca_mulatta
ENSCGRG00001017533	Polr1c	100	94.509	ENSMNEG00000028073	POLR1C	100	94.509	Macaca_nemestrina
ENSCGRG00001017533	Polr1c	100	94.509	ENSMLEG00000034818	POLR1C	100	94.509	Mandrillus_leucophaeus
ENSCGRG00001017533	Polr1c	99	72.206	ENSMAMG00000008700	polr1c	99	72.206	Mastacembelus_armatus
ENSCGRG00001017533	Polr1c	99	71.060	ENSMZEG00005018545	polr1c	99	71.633	Maylandia_zebra
ENSCGRG00001017533	Polr1c	84	76.976	ENSMGAG00000011020	POLR1C	100	76.976	Meleagris_gallopavo
ENSCGRG00001017533	Polr1c	100	98.555	ENSMAUG00000014329	Polr1c	100	98.555	Mesocricetus_auratus
ENSCGRG00001017533	Polr1c	55	31.633	ENSMAUG00000019031	-	72	31.633	Mesocricetus_auratus
ENSCGRG00001017533	Polr1c	100	93.931	ENSMICG00000005027	POLR1C	100	93.931	Microcebus_murinus
ENSCGRG00001017533	Polr1c	55	32.836	ENSMOCG00000013652	Polr2c	66	32.836	Microtus_ochrogaster
ENSCGRG00001017533	Polr1c	100	98.555	ENSMOCG00000017549	Polr1c	100	98.555	Microtus_ochrogaster
ENSCGRG00001017533	Polr1c	99	58.140	ENSMMOG00000005380	polr1c	99	58.140	Mola_mola
ENSCGRG00001017533	Polr1c	84	88.316	ENSMODG00000018964	POLR1C	100	88.316	Monodelphis_domestica
ENSCGRG00001017533	Polr1c	99	62.029	ENSMALG00000011711	polr1c	99	62.029	Monopterus_albus
ENSCGRG00001017533	Polr1c	100	86.705	MGP_CAROLIEiJ_G0021662	Polr1c	100	96.923	Mus_caroli
ENSCGRG00001017533	Polr1c	100	95.954	ENSMUSG00000067148	Polr1c	100	96.154	Mus_musculus
ENSCGRG00001017533	Polr1c	100	95.665	MGP_PahariEiJ_G0020654	Polr1c	100	95.665	Mus_pahari
ENSCGRG00001017533	Polr1c	100	96.243	MGP_SPRETEiJ_G0022574	Polr1c	100	96.538	Mus_spretus
ENSCGRG00001017533	Polr1c	100	94.798	ENSMPUG00000012916	POLR1C	91	94.798	Mustela_putorius_furo
ENSCGRG00001017533	Polr1c	100	95.665	ENSMLUG00000017751	POLR1C	99	95.665	Myotis_lucifugus
ENSCGRG00001017533	Polr1c	100	94.509	ENSNGAG00000023487	Polr1c	100	94.509	Nannospalax_galili
ENSCGRG00001017533	Polr1c	99	71.347	ENSNBRG00000018742	polr1c	99	71.920	Neolamprologus_brichardi
ENSCGRG00001017533	Polr1c	50	32.386	ENSNLEG00000003034	POLR2C	63	32.386	Nomascus_leucogenys
ENSCGRG00001017533	Polr1c	100	94.798	ENSNLEG00000004035	POLR1C	100	94.798	Nomascus_leucogenys
ENSCGRG00001017533	Polr1c	100	75.434	ENSMEUG00000006778	POLR1C	100	75.434	Notamacropus_eugenii
ENSCGRG00001017533	Polr1c	77	92.910	ENSOPRG00000000145	POLR1C	100	92.910	Ochotona_princeps
ENSCGRG00001017533	Polr1c	100	93.353	ENSODEG00000015831	-	100	93.353	Octodon_degus
ENSCGRG00001017533	Polr1c	63	91.324	ENSODEG00000017109	-	100	91.324	Octodon_degus
ENSCGRG00001017533	Polr1c	99	71.633	ENSONIG00000013133	polr1c	98	72.206	Oreochromis_niloticus
ENSCGRG00001017533	Polr1c	100	83.815	ENSOANG00000003043	POLR1C	100	83.815	Ornithorhynchus_anatinus
ENSCGRG00001017533	Polr1c	100	94.798	ENSOCUG00000005504	POLR1C	99	94.798	Oryctolagus_cuniculus
ENSCGRG00001017533	Polr1c	99	69.565	ENSORLG00000019743	polr1c	98	69.565	Oryzias_latipes
ENSCGRG00001017533	Polr1c	99	70.145	ENSORLG00020006489	POLR1C	98	70.145	Oryzias_latipes_hni
ENSCGRG00001017533	Polr1c	65	58.952	ENSORLG00020005555	polr1c	68	58.952	Oryzias_latipes_hni
ENSCGRG00001017533	Polr1c	99	69.565	ENSORLG00015013322	polr1c	98	69.565	Oryzias_latipes_hsok
ENSCGRG00001017533	Polr1c	99	70.145	ENSOMEG00000016527	polr1c	98	70.145	Oryzias_melastigma
ENSCGRG00001017533	Polr1c	100	93.391	ENSOGAG00000016318	POLR1C	100	93.391	Otolemur_garnettii
ENSCGRG00001017533	Polr1c	100	94.220	ENSOARG00000007503	POLR1C	100	94.220	Ovis_aries
ENSCGRG00001017533	Polr1c	56	31.313	ENSPPAG00000042822	POLR2C	69	31.313	Pan_paniscus
ENSCGRG00001017533	Polr1c	100	95.376	ENSPPAG00000043678	POLR1C	100	95.376	Pan_paniscus
ENSCGRG00001017533	Polr1c	100	94.509	ENSPPRG00000009760	POLR1C	100	94.509	Panthera_pardus
ENSCGRG00001017533	Polr1c	100	94.509	ENSPTIG00000014813	POLR1C	100	94.509	Panthera_tigris_altaica
ENSCGRG00001017533	Polr1c	100	95.376	ENSPTRG00000018202	POLR1C	100	95.376	Pan_troglodytes
ENSCGRG00001017533	Polr1c	100	94.798	ENSPANG00000009025	POLR1C	99	94.798	Papio_anubis
ENSCGRG00001017533	Polr1c	100	74.063	ENSPKIG00000009858	polr1c	100	74.063	Paramormyrops_kingsleyae
ENSCGRG00001017533	Polr1c	100	82.370	ENSPSIG00000012580	POLR1C	94	82.370	Pelodiscus_sinensis
ENSCGRG00001017533	Polr1c	56	32.161	ENSPMGG00000021249	polr2c	77	32.161	Periophthalmus_magnuspinnatus
ENSCGRG00001017533	Polr1c	99	60.290	ENSPMGG00000012121	polr1c	99	60.290	Periophthalmus_magnuspinnatus
ENSCGRG00001017533	Polr1c	100	98.555	ENSPEMG00000006970	Polr1c	100	98.555	Peromyscus_maniculatus_bairdii
ENSCGRG00001017533	Polr1c	55	31.472	ENSPMAG00000004827	polr2c	81	31.472	Petromyzon_marinus
ENSCGRG00001017533	Polr1c	99	71.264	ENSPMAG00000005560	polr1c	99	71.264	Petromyzon_marinus
ENSCGRG00001017533	Polr1c	100	88.439	ENSPCIG00000028137	POLR1C	98	88.439	Phascolarctos_cinereus
ENSCGRG00001017533	Polr1c	100	71.795	ENSPFOG00000014357	polr1c	98	72.080	Poecilia_formosa
ENSCGRG00001017533	Polr1c	100	71.795	ENSPFOG00000014342	POLR1C	100	72.080	Poecilia_formosa
ENSCGRG00001017533	Polr1c	69	65.272	ENSPLAG00000004111	polr1c	99	65.272	Poecilia_latipinna
ENSCGRG00001017533	Polr1c	100	71.795	ENSPMEG00000008420	polr1c	100	72.080	Poecilia_mexicana
ENSCGRG00001017533	Polr1c	100	71.795	ENSPMEG00000011877	-	100	72.080	Poecilia_mexicana
ENSCGRG00001017533	Polr1c	100	72.622	ENSPREG00000007985	polr1c	100	72.622	Poecilia_reticulata
ENSCGRG00001017533	Polr1c	100	95.087	ENSPPYG00000016645	POLR1C	100	95.087	Pongo_abelii
ENSCGRG00001017533	Polr1c	100	94.509	ENSPCOG00000024628	POLR1C	100	94.509	Propithecus_coquereli
ENSCGRG00001017533	Polr1c	100	86.127	ENSPVAG00000005689	POLR1C	100	86.127	Pteropus_vampyrus
ENSCGRG00001017533	Polr1c	99	71.347	ENSPNYG00000003620	polr1c	99	71.920	Pundamilia_nyererei
ENSCGRG00001017533	Polr1c	99	73.043	ENSPNAG00000008443	polr1c	99	73.043	Pygocentrus_nattereri
ENSCGRG00001017533	Polr1c	100	96.821	ENSRNOG00000019079	Polr1c	100	96.821	Rattus_norvegicus
ENSCGRG00001017533	Polr1c	100	94.798	ENSRBIG00000007155	POLR1C	100	94.798	Rhinopithecus_bieti
ENSCGRG00001017533	Polr1c	100	94.798	ENSRROG00000000257	POLR1C	100	94.798	Rhinopithecus_roxellana
ENSCGRG00001017533	Polr1c	55	30.928	YIL021W	RPB3	57	30.928	Saccharomyces_cerevisiae
ENSCGRG00001017533	Polr1c	90	46.984	YPR110C	RPC40	93	46.984	Saccharomyces_cerevisiae
ENSCGRG00001017533	Polr1c	100	95.376	ENSSBOG00000025735	POLR1C	99	95.114	Saimiri_boliviensis_boliviensis
ENSCGRG00001017533	Polr1c	100	80.636	ENSSHAG00000014456	POLR1C	100	80.636	Sarcophilus_harrisii
ENSCGRG00001017533	Polr1c	99	73.623	ENSSFOG00015019860	polr1c	99	73.623	Scleropages_formosus
ENSCGRG00001017533	Polr1c	99	71.884	ENSSMAG00000018865	polr1c	99	71.884	Scophthalmus_maximus
ENSCGRG00001017533	Polr1c	99	71.633	ENSSDUG00000015745	polr1c	91	72.206	Seriola_dumerili
ENSCGRG00001017533	Polr1c	99	71.347	ENSSLDG00000018285	polr1c	91	71.920	Seriola_lalandi_dorsalis
ENSCGRG00001017533	Polr1c	99	78.779	ENSSPUG00000011822	POLR1C	99	78.779	Sphenodon_punctatus
ENSCGRG00001017533	Polr1c	99	71.060	ENSSPAG00000022369	polr1c	99	71.633	Stegastes_partitus
ENSCGRG00001017533	Polr1c	100	94.220	ENSSSCG00000028007	POLR1C	99	94.220	Sus_scrofa
ENSCGRG00001017533	Polr1c	96	81.627	ENSTGUG00000009159	POLR1C	99	81.627	Taeniopygia_guttata
ENSCGRG00001017533	Polr1c	55	31.795	ENSTGUG00000004996	POLR2C	67	31.795	Taeniopygia_guttata
ENSCGRG00001017533	Polr1c	99	68.391	ENSTRUG00000006264	polr1c	99	68.391	Takifugu_rubripes
ENSCGRG00001017533	Polr1c	51	95.506	ENSTBEG00000002254	POLR1C	100	95.506	Tupaia_belangeri
ENSCGRG00001017533	Polr1c	76	91.255	ENSTTRG00000006344	POLR1C	76	91.255	Tursiops_truncatus
ENSCGRG00001017533	Polr1c	100	94.509	ENSUAMG00000025602	POLR1C	100	94.509	Ursus_americanus
ENSCGRG00001017533	Polr1c	100	94.509	ENSUMAG00000005938	POLR1C	100	94.509	Ursus_maritimus
ENSCGRG00001017533	Polr1c	55	33.333	ENSVVUG00000023516	-	65	33.333	Vulpes_vulpes
ENSCGRG00001017533	Polr1c	100	91.618	ENSVVUG00000028922	POLR1C	100	91.618	Vulpes_vulpes
ENSCGRG00001017533	Polr1c	100	76.945	ENSXETG00000010882	polr1c	100	76.945	Xenopus_tropicalis
ENSCGRG00001017533	Polr1c	100	72.701	ENSXCOG00000014185	polr1c	100	72.701	Xiphophorus_couchianus
ENSCGRG00001017533	Polr1c	100	71.510	ENSXMAG00000015076	polr1c	100	72.080	Xiphophorus_maculatus