EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00001017824 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Minus strand
Length: 2321 bases
Position: chrscaffold_39:10977070-10979390
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001017925	GUCT	PF08152.12	1.8e-16	1	1
ENSCGRP00001017919	GUCT	PF08152.12	2.3e-16	1	1
ENSCGRP00001017919	DEAD	PF00270.29	4.2e-39	1	1
ENSCGRP00001017925	DEAD	PF00270.29	4.4e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001022169	-	2214	-	ENSCGRP00001017925	737 (aa)	-	-
ENSCGRT00001022163	-	2178	-	ENSCGRP00001017919	725 (aa)	-	-

Gene Model

Click here to download ENSCGRG00001017824's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001017824's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00001017824	-	99	82.078	ENSCGRG00001016264	-	99	82.727
ENSCGRG00001017824	-	51	31.217	ENSCGRG00001022918	-	89	30.890
ENSCGRG00001017824	-	83	55.539	ENSCGRG00001020223	Ddx50	81	59.228

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001017824	-	100	72.611	ENSG00000165732	DDX21	100	75.314	Homo_sapiens
ENSCGRG00001017824	-	51	67.624	ENSAPOG00000012269	ddx21	70	67.708	Acanthochromis_polyacanthus
ENSCGRG00001017824	-	100	66.901	ENSAMEG00000017978	DDX21	100	65.182	Ailuropoda_melanoleuca
ENSCGRG00001017824	-	72	64.982	ENSACIG00000006429	ddx21	98	55.313	Amphilophus_citrinellus
ENSCGRG00001017824	-	78	61.184	ENSAOCG00000023174	ddx21	80	61.221	Amphiprion_ocellaris
ENSCGRG00001017824	-	78	61.184	ENSAPEG00000007108	ddx21	80	61.221	Amphiprion_percula
ENSCGRG00001017824	-	72	63.538	ENSATEG00000022194	ddx21	88	56.324	Anabas_testudineus
ENSCGRG00001017824	-	79	62.520	ENSAPLG00000013022	-	81	66.901	Anas_platyrhynchos
ENSCGRG00001017824	-	82	62.041	ENSACAG00000009829	DDX21	79	61.478	Anolis_carolinensis
ENSCGRG00001017824	-	93	75.138	ENSANAG00000038109	DDX21	94	85.802	Aotus_nancymaae
ENSCGRG00001017824	-	72	63.899	ENSACLG00000008248	ddx21	84	56.808	Astatotilapia_calliptera
ENSCGRG00001017824	-	86	55.988	ENSAMXG00000009140	ddx21	86	59.217	Astyanax_mexicanus
ENSCGRG00001017824	-	95	74.150	ENSBTAG00000014558	DDX21	100	69.770	Bos_taurus
ENSCGRG00001017824	-	93	75.208	ENSCJAG00000012876	DDX21	100	70.828	Callithrix_jacchus
ENSCGRG00001017824	-	100	72.427	ENSCAFG00000013791	DDX21	100	70.902	Canis_familiaris
ENSCGRG00001017824	-	93	74.028	ENSCHIG00000000248	-	100	71.410	Capra_hircus
ENSCGRG00001017824	-	92	57.447	ENSCHIG00000014104	-	92	54.145	Capra_hircus
ENSCGRG00001017824	-	95	55.070	ENSCHIG00000006053	-	88	53.125	Capra_hircus
ENSCGRG00001017824	-	100	69.593	ENSTSYG00000011231	DDX21	100	68.830	Carlito_syrichta
ENSCGRG00001017824	-	100	60.320	ENSCAPG00000005945	DDX21	99	59.761	Cavia_aperea
ENSCGRG00001017824	-	100	72.286	ENSCPOG00000015479	DDX21	100	71.556	Cavia_porcellus
ENSCGRG00001017824	-	93	74.862	ENSCCAG00000026288	DDX21	96	83.041	Cebus_capucinus
ENSCGRG00001017824	-	95	74.049	ENSCATG00000043540	DDX21	100	70.191	Cercocebus_atys
ENSCGRG00001017824	-	95	61.103	ENSCATG00000045019	-	99	58.421	Cercocebus_atys
ENSCGRG00001017824	-	100	73.121	ENSCLAG00000012235	DDX21	100	71.975	Chinchilla_lanigera
ENSCGRG00001017824	-	100	64.041	ENSCHOG00000000234	DDX21	100	64.691	Choloepus_hoffmanni
ENSCGRG00001017824	-	86	63.720	ENSCPBG00000019934	-	91	64.455	Chrysemys_picta_bellii
ENSCGRG00001017824	-	82	64.557	ENSCPBG00000019937	-	84	57.464	Chrysemys_picta_bellii
ENSCGRG00001017824	-	95	60.656	ENSCANG00000036110	-	96	59.091	Colobus_angolensis_palliatus
ENSCGRG00001017824	-	95	74.592	ENSCANG00000039926	DDX21	100	69.924	Colobus_angolensis_palliatus
ENSCGRG00001017824	-	99	82.078	ENSCGRG00000015134	-	99	82.727	Cricetulus_griseus_crigri
ENSCGRG00001017824	-	100	99.864	ENSCGRG00000008450	-	100	99.864	Cricetulus_griseus_crigri
ENSCGRG00001017824	-	70	64.140	ENSCSEG00000013939	ddx21	92	55.820	Cynoglossus_semilaevis
ENSCGRG00001017824	-	78	60.328	ENSCVAG00000018333	ddx21	93	54.545	Cyprinodon_variegatus
ENSCGRG00001017824	-	75	62.162	ENSDARG00000063626	ddx21	79	60.876	Danio_rerio
ENSCGRG00001017824	-	96	71.144	ENSDNOG00000001680	DDX21	99	70.317	Dasypus_novemcinctus
ENSCGRG00001017824	-	99	67.436	ENSDORG00000002202	Ddx21	100	67.912	Dipodomys_ordii
ENSCGRG00001017824	-	93	71.351	ENSETEG00000014073	DDX21	100	68.348	Echinops_telfairi
ENSCGRG00001017824	-	100	70.389	ENSEASG00005015598	DDX21	100	68.883	Equus_asinus_asinus
ENSCGRG00001017824	-	100	70.849	ENSECAG00000010810	DDX21	100	69.759	Equus_caballus
ENSCGRG00001017824	-	77	70.470	ENSEEUG00000005959	DDX21	100	65.903	Erinaceus_europaeus
ENSCGRG00001017824	-	74	60.839	ENSELUG00000018856	ddx21	88	56.250	Esox_lucius
ENSCGRG00001017824	-	100	72.808	ENSFCAG00000002109	DDX21	100	71.410	Felis_catus
ENSCGRG00001017824	-	70	68.148	ENSFALG00000013022	-	89	64.309	Ficedula_albicollis
ENSCGRG00001017824	-	68	62.524	ENSFALG00000013043	-	79	62.157	Ficedula_albicollis
ENSCGRG00001017824	-	100	72.484	ENSFDAG00000007401	DDX21	100	71.501	Fukomys_damarensis
ENSCGRG00001017824	-	69	64.486	ENSFHEG00000019089	ddx21	75	62.523	Fundulus_heteroclitus
ENSCGRG00001017824	-	69	59.369	ENSGMOG00000012354	ddx21	92	58.230	Gadus_morhua
ENSCGRG00001017824	-	81	56.661	ENSGALG00000042254	-	85	61.471	Gallus_gallus
ENSCGRG00001017824	-	76	65.464	ENSGALG00000004144	-	88	64.345	Gallus_gallus
ENSCGRG00001017824	-	71	63.686	ENSGAFG00000003427	ddx21	93	54.254	Gambusia_affinis
ENSCGRG00001017824	-	69	64.179	ENSGACG00000016060	ddx21	89	60.972	Gasterosteus_aculeatus
ENSCGRG00001017824	-	82	62.559	ENSGAGG00000022169	-	97	55.453	Gopherus_agassizii
ENSCGRG00001017824	-	87	61.448	ENSGAGG00000022163	-	85	62.597	Gopherus_agassizii
ENSCGRG00001017824	-	100	72.866	ENSGGOG00000005065	DDX21	100	71.847	Gorilla_gorilla
ENSCGRG00001017824	-	72	63.899	ENSHBUG00000017638	ddx21	84	56.808	Haplochromis_burtoni
ENSCGRG00001017824	-	100	72.321	ENSHGLG00000013902	DDX21	100	71.338	Heterocephalus_glaber_female
ENSCGRG00001017824	-	100	72.321	ENSHGLG00100015956	DDX21	100	71.338	Heterocephalus_glaber_male
ENSCGRG00001017824	-	70	63.370	ENSHCOG00000014503	ddx21	87	58.269	Hippocampus_comes
ENSCGRG00001017824	-	76	62.245	ENSIPUG00000006972	ddx21	83	60.157	Ictalurus_punctatus
ENSCGRG00001017824	-	100	73.048	ENSSTOG00000011572	DDX21	100	71.464	Ictidomys_tridecemlineatus
ENSCGRG00001017824	-	99	71.501	ENSJJAG00000014035	Ddx21	100	69.837	Jaculus_jaculus
ENSCGRG00001017824	-	72	62.230	ENSKMAG00000020766	ddx21	80	60.294	Kryptolebias_marmoratus
ENSCGRG00001017824	-	78	58.795	ENSLBEG00000001244	ddx21	88	56.112	Labrus_bergylta
ENSCGRG00001017824	-	78	63.317	ENSLACG00000000658	DDX21	99	63.211	Latimeria_chalumnae
ENSCGRG00001017824	-	85	56.801	ENSLOCG00000009123	ddx21	79	60.130	Lepisosteus_oculatus
ENSCGRG00001017824	-	95	72.304	ENSLAFG00000007962	DDX21	100	69.416	Loxodonta_africana
ENSCGRG00001017824	-	95	61.348	ENSMFAG00000033536	-	99	58.661	Macaca_fascicularis
ENSCGRG00001017824	-	95	74.457	ENSMFAG00000044838	DDX21	95	84.053	Macaca_fascicularis
ENSCGRG00001017824	-	95	74.592	ENSMMUG00000001005	DDX21	100	70.446	Macaca_mulatta
ENSCGRG00001017824	-	95	65.241	ENSMMUG00000032331	-	97	63.490	Macaca_mulatta
ENSCGRG00001017824	-	95	74.659	ENSMNEG00000032825	DDX21	100	70.446	Macaca_nemestrina
ENSCGRG00001017824	-	95	71.467	ENSMLEG00000028940	DDX21	91	85.489	Mandrillus_leucophaeus
ENSCGRG00001017824	-	95	61.379	ENSMLEG00000028215	-	99	58.684	Mandrillus_leucophaeus
ENSCGRG00001017824	-	79	60.033	ENSMAMG00000019683	ddx21	85	60.033	Mastacembelus_armatus
ENSCGRG00001017824	-	72	63.899	ENSMZEG00005011618	ddx21	89	56.808	Maylandia_zebra
ENSCGRG00001017824	-	76	64.706	ENSMGAG00000004298	DDX21	98	61.596	Meleagris_gallopavo
ENSCGRG00001017824	-	96	82.923	ENSMAUG00000011153	Ddx21	95	83.743	Mesocricetus_auratus
ENSCGRG00001017824	-	100	71.975	ENSMICG00000015112	-	100	70.318	Microcebus_murinus
ENSCGRG00001017824	-	95	68.603	ENSMICG00000033371	-	98	72.358	Microcebus_murinus
ENSCGRG00001017824	-	99	79.537	ENSMOCG00000020855	Ddx21	100	78.021	Microtus_ochrogaster
ENSCGRG00001017824	-	61	65.659	ENSMMOG00000015938	ddx21	87	65.659	Mola_mola
ENSCGRG00001017824	-	79	67.657	ENSMODG00000010727	DDX21	99	61.785	Monodelphis_domestica
ENSCGRG00001017824	-	79	57.423	ENSMALG00000010489	ddx21	97	55.486	Monopterus_albus
ENSCGRG00001017824	-	99	78.663	MGP_CAROLIEiJ_G0015388	Ddx21	100	77.535	Mus_caroli
ENSCGRG00001017824	-	95	81.777	ENSMUSG00000020075	Ddx21	100	76.495	Mus_musculus
ENSCGRG00001017824	-	99	82.078	MGP_SPRETEiJ_G0016199	Ddx21	95	81.297	Mus_spretus
ENSCGRG00001017824	-	88	76.565	ENSMPUG00000004603	DDX21	100	70.907	Mustela_putorius_furo
ENSCGRG00001017824	-	95	70.649	ENSMLUG00000023298	DDX21	88	73.823	Myotis_lucifugus
ENSCGRG00001017824	-	100	72.625	ENSNGAG00000022273	Ddx21	100	73.797	Nannospalax_galili
ENSCGRG00001017824	-	72	63.899	ENSNBRG00000006198	ddx21	89	57.122	Neolamprologus_brichardi
ENSCGRG00001017824	-	95	75.408	ENSNLEG00000011591	DDX21	100	75.035	Nomascus_leucogenys
ENSCGRG00001017824	-	87	66.915	ENSOPRG00000001640	DDX21	98	62.997	Ochotona_princeps
ENSCGRG00001017824	-	88	63.731	ENSODEG00000012879	-	99	60.962	Octodon_degus
ENSCGRG00001017824	-	72	63.899	ENSONIG00000005499	ddx21	83	57.269	Oreochromis_niloticus
ENSCGRG00001017824	-	87	61.391	ENSOANG00000004777	DDX21	89	58.856	Ornithorhynchus_anatinus
ENSCGRG00001017824	-	82	75.975	ENSOCUG00000002888	DDX21	90	75.312	Oryctolagus_cuniculus
ENSCGRG00001017824	-	78	60.100	ENSORLG00000010122	ddx21	96	59.520	Oryzias_latipes
ENSCGRG00001017824	-	84	56.968	ENSORLG00020004409	ddx21	95	59.520	Oryzias_latipes_hni
ENSCGRG00001017824	-	78	59.967	ENSORLG00015000051	ddx21	96	59.520	Oryzias_latipes_hsok
ENSCGRG00001017824	-	81	58.506	ENSOMEG00000004523	ddx21	81	59.200	Oryzias_melastigma
ENSCGRG00001017824	-	78	72.408	ENSOGAG00000031242	-	99	71.220	Otolemur_garnettii
ENSCGRG00001017824	-	100	63.121	ENSOGAG00000001846	-	95	73.397	Otolemur_garnettii
ENSCGRG00001017824	-	93	74.341	ENSOARG00000005307	DDX21	100	70.013	Ovis_aries
ENSCGRG00001017824	-	100	72.739	ENSPPAG00000036670	DDX21	100	71.720	Pan_paniscus
ENSCGRG00001017824	-	100	72.935	ENSPPRG00000012523	DDX21	100	71.537	Panthera_pardus
ENSCGRG00001017824	-	100	73.062	ENSPTIG00000007268	DDX21	100	71.410	Panthera_tigris_altaica
ENSCGRG00001017824	-	100	72.739	ENSPTRG00000002563	DDX21	100	71.720	Pan_troglodytes
ENSCGRG00001017824	-	95	60.966	ENSPANG00000031334	-	99	58.289	Papio_anubis
ENSCGRG00001017824	-	95	74.321	ENSPANG00000022140	DDX21	100	70.446	Papio_anubis
ENSCGRG00001017824	-	82	57.492	ENSPKIG00000014660	ddx21	97	57.614	Paramormyrops_kingsleyae
ENSCGRG00001017824	-	89	62.084	ENSPSIG00000004724	DDX21	99	61.968	Pelodiscus_sinensis
ENSCGRG00001017824	-	99	80.127	ENSPEMG00000018513	Ddx21	99	80.230	Peromyscus_maniculatus_bairdii
ENSCGRG00001017824	-	94	59.633	ENSPCIG00000015505	DDX21	96	63.966	Phascolarctos_cinereus
ENSCGRG00001017824	-	71	63.869	ENSPFOG00000016196	ddx21	87	53.825	Poecilia_formosa
ENSCGRG00001017824	-	66	63.830	ENSPLAG00000017849	ddx21	83	59.386	Poecilia_latipinna
ENSCGRG00001017824	-	71	63.869	ENSPMEG00000014571	ddx21	87	53.986	Poecilia_mexicana
ENSCGRG00001017824	-	95	75.543	ENSPPYG00000002389	DDX21	100	71.592	Pongo_abelii
ENSCGRG00001017824	-	84	71.073	ENSPCAG00000016697	DDX21	100	66.475	Procavia_capensis
ENSCGRG00001017824	-	100	68.957	ENSPCOG00000019284	DDX21	100	68.153	Propithecus_coquereli
ENSCGRG00001017824	-	100	72.340	ENSPVAG00000009521	DDX21	100	70.955	Pteropus_vampyrus
ENSCGRG00001017824	-	68	64.137	ENSPNYG00000015566	ddx21	92	60.929	Pundamilia_nyererei
ENSCGRG00001017824	-	72	61.939	ENSPNAG00000004814	ddx21	79	62.411	Pygocentrus_nattereri
ENSCGRG00001017824	-	100	77.735	ENSRNOG00000048990	AABR07037356.1	100	77.452	Rattus_norvegicus
ENSCGRG00001017824	-	100	78.117	ENSRNOG00000043099	Ddx21	100	77.834	Rattus_norvegicus
ENSCGRG00001017824	-	95	69.051	ENSRBIG00000035862	-	100	64.841	Rhinopithecus_bieti
ENSCGRG00001017824	-	95	74.864	ENSRBIG00000043721	-	92	80.211	Rhinopithecus_bieti
ENSCGRG00001017824	-	95	74.728	ENSRROG00000033387	DDX21	100	70.701	Rhinopithecus_roxellana
ENSCGRG00001017824	-	95	58.056	ENSSBOG00000025801	-	92	57.528	Saimiri_boliviensis_boliviensis
ENSCGRG00001017824	-	93	55.804	ENSSFOG00015014610	ddx21	92	61.065	Scleropages_formosus
ENSCGRG00001017824	-	69	63.433	ENSSMAG00000003932	ddx21	81	60.458	Scophthalmus_maximus
ENSCGRG00001017824	-	71	63.504	ENSSDUG00000021420	ddx21	92	55.772	Seriola_dumerili
ENSCGRG00001017824	-	72	62.410	ENSSLDG00000025665	ddx21	97	59.936	Seriola_lalandi_dorsalis
ENSCGRG00001017824	-	63	61.589	ENSSARG00000014024	-	69	61.429	Sorex_araneus
ENSCGRG00001017824	-	78	65.058	ENSSPUG00000004088	DDX21	83	65.506	Sphenodon_punctatus
ENSCGRG00001017824	-	70	64.695	ENSSPAG00000013142	ddx21	93	56.742	Stegastes_partitus
ENSCGRG00001017824	-	100	71.756	ENSSSCG00000010247	DDX21	100	70.229	Sus_scrofa
ENSCGRG00001017824	-	69	69.850	ENSTGUG00000003810	-	90	64.136	Taeniopygia_guttata
ENSCGRG00001017824	-	73	63.588	ENSTRUG00000017570	ddx21	85	60.190	Takifugu_rubripes
ENSCGRG00001017824	-	77	61.849	ENSTNIG00000013798	ddx21	99	60.450	Tetraodon_nigroviridis
ENSCGRG00001017824	-	88	70.685	ENSTBEG00000002310	DDX21	100	66.710	Tupaia_belangeri
ENSCGRG00001017824	-	96	73.423	ENSTTRG00000016398	DDX21	100	69.632	Tursiops_truncatus
ENSCGRG00001017824	-	100	71.824	ENSUMAG00000007735	DDX21	100	69.975	Ursus_maritimus
ENSCGRG00001017824	-	80	78.904	ENSVPAG00000000627	DDX21	98	73.835	Vicugna_pacos
ENSCGRG00001017824	-	100	70.603	ENSVVUG00000020486	DDX21	100	69.095	Vulpes_vulpes
ENSCGRG00001017824	-	68	62.382	ENSXCOG00000009654	ddx21	90	54.863	Xiphophorus_couchianus
ENSCGRG00001017824	-	71	62.956	ENSXMAG00000008199	ddx21	93	54.114	Xiphophorus_maculatus