EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCGRG00001018166 (Gene tree)
Gene ID
-
Gene Symbol
Pabpc4
Alias
-
Full Name
poly(A) binding protein cytoplasmic 4
Gene Type
protein_coding
Species
Cricetulus_griseus_chok1gshd
Status
putative
Strand
Minus strand
Length
16230 bases
Position
chrscaffold_2:29769973-29786202
Accession
100751578
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCGRP00001018471PABPPF00658.181.5e-3111
ENSCGRP00001018464PABPPF00658.181.5e-3111
ENSCGRP00001018448PABPPF00658.181.8e-3111
ENSCGRP00001018471RRM_5PF13893.61.1e-0912
ENSCGRP00001018471RRM_5PF13893.61.1e-0922
ENSCGRP00001018464RRM_5PF13893.61.2e-0912
ENSCGRP00001018464RRM_5PF13893.61.2e-0922
ENSCGRP00001018448RRM_5PF13893.61.8e-0912
ENSCGRP00001018448RRM_5PF13893.61.8e-0922
ENSCGRP00001018471RRM_1PF00076.228.6e-9214
ENSCGRP00001018471RRM_1PF00076.228.6e-9224
ENSCGRP00001018471RRM_1PF00076.228.6e-9234
ENSCGRP00001018471RRM_1PF00076.228.6e-9244
ENSCGRP00001018464RRM_1PF00076.229.3e-9214
ENSCGRP00001018464RRM_1PF00076.229.3e-9224
ENSCGRP00001018464RRM_1PF00076.229.3e-9234
ENSCGRP00001018464RRM_1PF00076.229.3e-9244
ENSCGRP00001018448RRM_1PF00076.221.4e-9114
ENSCGRP00001018448RRM_1PF00076.221.4e-9124
ENSCGRP00001018448RRM_1PF00076.221.4e-9134
ENSCGRP00001018448RRM_1PF00076.221.4e-9144
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCGRT00001022692-2538XM_007635537ENSCGRP00001018448663 (aa)XP_007633727-
ENSCGRT00001022708-1857-ENSCGRP00001018464618 (aa)--
ENSCGRT00001022715-1836-ENSCGRP00001018471611 (aa)--
Gene Model
Click here to download ENSCGRG00001018166's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001018166's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCGRG00001018166Pabpc45930.204ENSCGRG00001013417Tia18330.204
ENSCGRG00001018166Pabpc49868.463ENSCGRG00001007983Pabpc69867.818
ENSCGRG00001018166Pabpc45631.646ENSCGRG00001005548Hnrnpa05032.450
ENSCGRG00001018166Pabpc49760.841ENSCGRG00001021938Pabpc1l9960.680
ENSCGRG00001018166Pabpc49878.150ENSCGRG00001022067-9877.990
ENSCGRG00001018166Pabpc45037.113ENSCGRG00001012872Celf66537.113
ENSCGRG00001018166Pabpc46269.421ENSCGRG00001002070Pabpc4l9969.041
ENSCGRG00001018166Pabpc45136.111ENSCGRG00001018909Rbm36336.111
ENSCGRG00001018166Pabpc46033.553ENSCGRG00001013676Elavl19533.553
ENSCGRG00001018166Pabpc46076.923ENSCGRG00001023387-9673.846
ENSCGRG00001018166Pabpc46734.940ENSCGRG00001024409Elavl28634.940
ENSCGRG00001018166Pabpc46037.647ENSCGRG00001015058Celf26137.647
ENSCGRG00001018166Pabpc46130.952ENSCGRG00001020348Elavl49030.625
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCGRG00001018166Pabpc410097.289ENSG00000090621PABPC4100100.000Homo_sapiens
ENSCGRG00001018166Pabpc49884.903ENSAPOG00000001161pabpc49885.505Acanthochromis_polyacanthus
ENSCGRG00001018166Pabpc410097.139ENSAMEG00000011535-10097.139Ailuropoda_melanoleuca
ENSCGRG00001018166Pabpc49756.814ENSAMEG00000015083-9756.114Ailuropoda_melanoleuca
ENSCGRG00001018166Pabpc410084.335ENSACIG00000023343pabpc49885.299Amphilophus_citrinellus
ENSCGRG00001018166Pabpc49885.065ENSAOCG00000021529pabpc49885.668Amphiprion_ocellaris
ENSCGRG00001018166Pabpc49885.065ENSAPEG00000019196pabpc49885.668Amphiprion_percula
ENSCGRG00001018166Pabpc49884.765ENSATEG00000007402pabpc49885.203Anabas_testudineus
ENSCGRG00001018166Pabpc410087.244ENSAPLG00000009729-9988.585Anas_platyrhynchos
ENSCGRG00001018166Pabpc49986.702ENSACAG00000002544PABPC49987.477Anolis_carolinensis
ENSCGRG00001018166Pabpc410097.440ENSANAG00000025079PABPC410097.440Aotus_nancymaae
ENSCGRG00001018166Pabpc410084.395ENSACLG00000019558pabpc49885.366Astatotilapia_calliptera
ENSCGRG00001018166Pabpc49977.603ENSAMXG00000018779pabpc49878.812Astyanax_mexicanus
ENSCGRG00001018166Pabpc45986.826ENSBTAG00000048536-9386.826Bos_taurus
ENSCGRG00001018166Pabpc410094.887ENSBTAG00000017125PABPC410094.887Bos_taurus
ENSCGRG00001018166Pabpc410097.139ENSCJAG00000002512-10097.139Callithrix_jacchus
ENSCGRG00001018166Pabpc47590.521ENSCJAG00000045953-9386.777Callithrix_jacchus
ENSCGRG00001018166Pabpc49997.000ENSCAFG00000003081PABPC49995.498Canis_familiaris
ENSCGRG00001018166Pabpc410097.289ENSCAFG00020004161PABPC410097.289Canis_lupus_dingo
ENSCGRG00001018166Pabpc410097.289ENSCHIG00000019398-10097.289Capra_hircus
ENSCGRG00001018166Pabpc410075.452ENSCHIG00000023385-9875.191Capra_hircus
ENSCGRG00001018166Pabpc410097.590ENSTSYG00000006532PABPC410097.590Carlito_syrichta
ENSCGRG00001018166Pabpc49997.583ENSCAPG00000015984PABPC410097.583Cavia_aperea
ENSCGRG00001018166Pabpc410097.590ENSCPOG00000009552PABPC410097.590Cavia_porcellus
ENSCGRG00001018166Pabpc410097.139ENSCCAG00000037306PABPC410097.139Cebus_capucinus
ENSCGRG00001018166Pabpc410097.440ENSCATG00000042164PABPC410097.440Cercocebus_atys
ENSCGRG00001018166Pabpc410097.440ENSCLAG00000011899PABPC410097.440Chinchilla_lanigera
ENSCGRG00001018166Pabpc410097.440ENSCSAG00000001135PABPC410097.440Chlorocebus_sabaeus
ENSCGRG00001018166Pabpc49096.570ENSCHOG00000005327PABPC48096.570Choloepus_hoffmanni
ENSCGRG00001018166Pabpc410088.661ENSCPBG00000001038PABPC49989.228Chrysemys_picta_bellii
ENSCGRG00001018166Pabpc49997.405ENSCANG00000034177PABPC410097.405Colobus_angolensis_palliatus
ENSCGRG00001018166Pabpc499100.000ENSCGRG00000009777Pabpc4100100.000Cricetulus_griseus_crigri
ENSCGRG00001018166Pabpc410083.439ENSCSEG00000000130pabpc49884.715Cynoglossus_semilaevis
ENSCGRG00001018166Pabpc49984.168ENSCVAG00000019246pabpc49885.479Cyprinodon_variegatus
ENSCGRG00001018166Pabpc49883.625ENSDARG00000059259pabpc410084.488Danio_rerio
ENSCGRG00001018166Pabpc49797.759ENSDNOG00000018444-9997.759Dasypus_novemcinctus
ENSCGRG00001018166Pabpc410095.482ENSDORG00000011581Pabpc410095.482Dipodomys_ordii
ENSCGRG00001018166Pabpc48660.633ENSETEG00000009172-9860.894Echinops_telfairi
ENSCGRG00001018166Pabpc4100100.000ENSETEG00000018453-83100.000Echinops_telfairi
ENSCGRG00001018166Pabpc49676.384ENSEBUG00000013782pabpc49976.404Eptatretus_burgeri
ENSCGRG00001018166Pabpc49877.331ENSEBUG00000000992pabpc49980.508Eptatretus_burgeri
ENSCGRG00001018166Pabpc410097.289ENSEASG00005014119PABPC410097.289Equus_asinus_asinus
ENSCGRG00001018166Pabpc410097.289ENSECAG00000009396PABPC410097.289Equus_caballus
ENSCGRG00001018166Pabpc49794.590ENSEEUG00000002962PABPC49995.084Erinaceus_europaeus
ENSCGRG00001018166Pabpc49882.428ENSELUG00000003195pabpc49881.920Esox_lucius
ENSCGRG00001018166Pabpc410097.440ENSFCAG00000015254-10097.440Felis_catus
ENSCGRG00001018166Pabpc410086.909ENSFALG00000000543PABPC49988.567Ficedula_albicollis
ENSCGRG00001018166Pabpc410097.590ENSFDAG00000020016-10097.590Fukomys_damarensis
ENSCGRG00001018166Pabpc49065.510ENSFDAG00000010581-9861.670Fukomys_damarensis
ENSCGRG00001018166Pabpc410084.236ENSFHEG00000007548pabpc49885.366Fundulus_heteroclitus
ENSCGRG00001018166Pabpc410082.261ENSGMOG00000019025pabpc49883.333Gadus_morhua
ENSCGRG00001018166Pabpc410087.559ENSGALG00000003800PABPC49989.228Gallus_gallus
ENSCGRG00001018166Pabpc49990.094ENSGAFG00000018195pabpc49595.556Gambusia_affinis
ENSCGRG00001018166Pabpc410082.962ENSGACG00000007179pabpc49884.065Gasterosteus_aculeatus
ENSCGRG00001018166Pabpc410088.661ENSGAGG00000001888PABPC49989.228Gopherus_agassizii
ENSCGRG00001018166Pabpc410097.289ENSGGOG00000004002PABPC410097.289Gorilla_gorilla
ENSCGRG00001018166Pabpc410084.554ENSHBUG00000020206pabpc49885.528Haplochromis_burtoni
ENSCGRG00001018166Pabpc410097.590ENSHGLG00000011162PABPC410097.590Heterocephalus_glaber_female
ENSCGRG00001018166Pabpc410095.181ENSHGLG00100001580PABPC410095.181Heterocephalus_glaber_male
ENSCGRG00001018166Pabpc410083.254ENSHCOG00000012694pabpc49884.528Hippocampus_comes
ENSCGRG00001018166Pabpc49782.448ENSIPUG00000016620pabpc49882.560Ictalurus_punctatus
ENSCGRG00001018166Pabpc410097.254ENSSTOG00000010416PABPC410097.254Ictidomys_tridecemlineatus
ENSCGRG00001018166Pabpc410093.062ENSJJAG00000007781Pabpc49993.692Jaculus_jaculus
ENSCGRG00001018166Pabpc49990.618ENSKMAG00000013597pabpc49884.903Kryptolebias_marmoratus
ENSCGRG00001018166Pabpc410083.968ENSLBEG00000013654pabpc49884.578Labrus_bergylta
ENSCGRG00001018166Pabpc410084.664ENSLACG00000011907PABPC49986.262Latimeria_chalumnae
ENSCGRG00001018166Pabpc49985.174ENSLOCG00000001877pabpc49886.058Lepisosteus_oculatus
ENSCGRG00001018166Pabpc410097.440ENSLAFG00000000151PABPC410097.440Loxodonta_africana
ENSCGRG00001018166Pabpc410097.440ENSMFAG00000041481PABPC410097.440Macaca_fascicularis
ENSCGRG00001018166Pabpc410097.440ENSMMUG00000007497PABPC410097.440Macaca_mulatta
ENSCGRG00001018166Pabpc410097.289ENSMNEG00000043054PABPC410097.289Macaca_nemestrina
ENSCGRG00001018166Pabpc410097.440ENSMLEG00000040716PABPC410097.440Mandrillus_leucophaeus
ENSCGRG00001018166Pabpc49884.765ENSMAMG00000010025pabpc49885.522Mastacembelus_armatus
ENSCGRG00001018166Pabpc410084.236ENSMZEG00005006141pabpc49885.203Maylandia_zebra
ENSCGRG00001018166Pabpc49984.833ENSMGAG00000005408PABPC49985.520Meleagris_gallopavo
ENSCGRG00001018166Pabpc45981.287ENSMAUG00000004089-9281.287Mesocricetus_auratus
ENSCGRG00001018166Pabpc47390.865ENSMAUG00000001295-9790.865Mesocricetus_auratus
ENSCGRG00001018166Pabpc410080.982ENSMAUG00000019763-84100.000Mesocricetus_auratus
ENSCGRG00001018166Pabpc48897.436ENSMICG00000016633-10097.436Microcebus_murinus
ENSCGRG00001018166Pabpc49984.364ENSMICG00000036729-9884.916Microcebus_murinus
ENSCGRG00001018166Pabpc410098.645ENSMOCG00000006763Pabpc410098.645Microtus_ochrogaster
ENSCGRG00001018166Pabpc410082.476ENSMMOG00000002363pabpc49882.287Mola_mola
ENSCGRG00001018166Pabpc46173.446ENSMODG00000018051-9173.446Monodelphis_domestica
ENSCGRG00001018166Pabpc49788.889ENSMODG00000017657-9988.650Monodelphis_domestica
ENSCGRG00001018166Pabpc49884.491ENSMALG00000011017pabpc49884.927Monopterus_albus
ENSCGRG00001018166Pabpc49982.264MGP_CAROLIEiJ_G0024864-9883.477Mus_caroli
ENSCGRG00001018166Pabpc49996.979MGP_CAROLIEiJ_G0026435-10099.291Mus_caroli
ENSCGRG00001018166Pabpc49997.432ENSMUSG00000011257Pabpc410099.405Mus_musculus
ENSCGRG00001018166Pabpc49997.099MGP_PahariEiJ_G0028765Pabpc4100100.000Mus_pahari
ENSCGRG00001018166Pabpc49977.630MGP_SPRETEiJ_G0027415Pabpc410099.291Mus_spretus
ENSCGRG00001018166Pabpc49451.591ENSMPUG00000006836-10051.244Mustela_putorius_furo
ENSCGRG00001018166Pabpc410097.440ENSMPUG00000014414-10097.440Mustela_putorius_furo
ENSCGRG00001018166Pabpc49997.245ENSMLUG00000012068PABPC410097.245Myotis_lucifugus
ENSCGRG00001018166Pabpc410097.577ENSNGAG00000018292Pabpc410097.577Nannospalax_galili
ENSCGRG00001018166Pabpc46985.876ENSNBRG00000010047-7585.876Neolamprologus_brichardi
ENSCGRG00001018166Pabpc46192.308ENSNBRG00000009708pabpc49892.308Neolamprologus_brichardi
ENSCGRG00001018166Pabpc410095.030ENSNLEG00000011928PABPC410095.030Nomascus_leucogenys
ENSCGRG00001018166Pabpc48797.252ENSOPRG00000011984PABPC48797.684Ochotona_princeps
ENSCGRG00001018166Pabpc410096.988ENSODEG00000006592-10096.988Octodon_degus
ENSCGRG00001018166Pabpc49988.163ENSODEG00000017434-9888.382Octodon_degus
ENSCGRG00001018166Pabpc45585.714ENSODEG00000013457-10085.714Octodon_degus
ENSCGRG00001018166Pabpc410084.554ENSONIG00000008176pabpc49885.528Oreochromis_niloticus
ENSCGRG00001018166Pabpc410088.346ENSOANG00000010001PABPC49988.746Ornithorhynchus_anatinus
ENSCGRG00001018166Pabpc49597.627ENSOCUG00000000562PABPC48897.627Oryctolagus_cuniculus
ENSCGRG00001018166Pabpc49890.741ENSORLG00000017479pabpc49790.741Oryzias_latipes
ENSCGRG00001018166Pabpc49890.741ENSORLG00020018644pabpc49790.741Oryzias_latipes_hni
ENSCGRG00001018166Pabpc49890.741ENSORLG00015015042pabpc49790.741Oryzias_latipes_hsok
ENSCGRG00001018166Pabpc49884.740ENSOMEG00000014410pabpc49885.366Oryzias_melastigma
ENSCGRG00001018166Pabpc410094.603ENSOGAG00000004067PABPC410094.603Otolemur_garnettii
ENSCGRG00001018166Pabpc410097.289ENSOARG00000020060PABPC410097.289Ovis_aries
ENSCGRG00001018166Pabpc410097.289ENSPPAG00000043625PABPC410097.289Pan_paniscus
ENSCGRG00001018166Pabpc410097.440ENSPPRG00000024727PABPC410097.440Panthera_pardus
ENSCGRG00001018166Pabpc410097.440ENSPTIG00000005829PABPC410097.440Panthera_tigris_altaica
ENSCGRG00001018166Pabpc410097.289ENSPTRG00000000573PABPC410097.289Pan_troglodytes
ENSCGRG00001018166Pabpc410097.590ENSPANG00000009484PABPC410097.590Papio_anubis
ENSCGRG00001018166Pabpc49984.142ENSPKIG00000025356pabpc49884.959Paramormyrops_kingsleyae
ENSCGRG00001018166Pabpc410088.504ENSPSIG00000016892PABPC49989.068Pelodiscus_sinensis
ENSCGRG00001018166Pabpc410083.929ENSPMGG00000009073pabpc49884.551Periophthalmus_magnuspinnatus
ENSCGRG00001018166Pabpc49998.190ENSPEMG00000023569-10098.190Peromyscus_maniculatus_bairdii
ENSCGRG00001018166Pabpc49991.554ENSPEMG00000024193-10091.554Peromyscus_maniculatus_bairdii
ENSCGRG00001018166Pabpc48873.601ENSPMAG00000002836pabpc410074.476Petromyzon_marinus
ENSCGRG00001018166Pabpc49673.109ENSPMAG00000007885pabpc49972.165Petromyzon_marinus
ENSCGRG00001018166Pabpc49789.968ENSPCIG00000020674PABPC49893.095Phascolarctos_cinereus
ENSCGRG00001018166Pabpc410083.599ENSPFOG00000002682pabpc49885.041Poecilia_formosa
ENSCGRG00001018166Pabpc410083.439ENSPLAG00000010112pabpc49885.041Poecilia_latipinna
ENSCGRG00001018166Pabpc49884.117ENSPMEG00000019739pabpc49885.041Poecilia_mexicana
ENSCGRG00001018166Pabpc410083.917ENSPREG00000001589pabpc49885.041Poecilia_reticulata
ENSCGRG00001018166Pabpc410097.289ENSPPYG00000001506PABPC410097.289Pongo_abelii
ENSCGRG00001018166Pabpc410092.319ENSPCAG00000003341PABPC410092.319Procavia_capensis
ENSCGRG00001018166Pabpc49979.899ENSPCOG00000025882-9493.478Propithecus_coquereli
ENSCGRG00001018166Pabpc410097.293ENSPCOG00000023725-10097.293Propithecus_coquereli
ENSCGRG00001018166Pabpc49996.661ENSPVAG00000002187PABPC410096.661Pteropus_vampyrus
ENSCGRG00001018166Pabpc410084.395ENSPNYG00000006134pabpc49885.366Pundamilia_nyererei
ENSCGRG00001018166Pabpc49983.703ENSPNAG00000024355pabpc49884.702Pygocentrus_nattereri
ENSCGRG00001018166Pabpc49995.166ENSRNOG00000015642Pabpc410095.166Rattus_norvegicus
ENSCGRG00001018166Pabpc49993.051ENSRNOG00000028592AABR07035074.110093.051Rattus_norvegicus
ENSCGRG00001018166Pabpc410097.440ENSRBIG00000039761PABPC410097.440Rhinopithecus_bieti
ENSCGRG00001018166Pabpc410097.440ENSRROG00000033355PABPC410097.440Rhinopithecus_roxellana
ENSCGRG00001018166Pabpc410097.289ENSSBOG00000026193PABPC410097.289Saimiri_boliviensis_boliviensis
ENSCGRG00001018166Pabpc49789.806ENSSHAG00000018139PABPC49989.550Sarcophilus_harrisii
ENSCGRG00001018166Pabpc49985.155ENSSFOG00015023514pabpc49883.934Scleropages_formosus
ENSCGRG00001018166Pabpc410083.121ENSSMAG00000009007pabpc49884.553Scophthalmus_maximus
ENSCGRG00001018166Pabpc49884.603ENSSDUG00000012683pabpc49885.203Seriola_dumerili
ENSCGRG00001018166Pabpc49884.603ENSSLDG00000013025pabpc49489.216Seriola_lalandi_dorsalis
ENSCGRG00001018166Pabpc410089.307ENSSARG00000000310PABPC49990.323Sorex_araneus
ENSCGRG00001018166Pabpc410088.553ENSSPUG00000003204PABPC49989.935Sphenodon_punctatus
ENSCGRG00001018166Pabpc49890.562ENSSPAG00000009252pabpc49890.359Stegastes_partitus
ENSCGRG00001018166Pabpc48949.412ENSSSCG00000036170-9449.540Sus_scrofa
ENSCGRG00001018166Pabpc410097.590ENSSSCG00000003660-10097.590Sus_scrofa
ENSCGRG00001018166Pabpc410085.586ENSTGUG00000001266PABPC49986.677Taeniopygia_guttata
ENSCGRG00001018166Pabpc410083.121ENSTRUG00000005907pabpc49884.390Takifugu_rubripes
ENSCGRG00001018166Pabpc410079.167ENSTNIG00000016902pabpc49879.316Tetraodon_nigroviridis
ENSCGRG00001018166Pabpc49985.309ENSTBEG00000009035PABPC49886.689Tupaia_belangeri
ENSCGRG00001018166Pabpc49980.798ENSTTRG00000014340PABPC49885.836Tursiops_truncatus
ENSCGRG00001018166Pabpc410097.440ENSUAMG00000000303PABPC410097.440Ursus_americanus
ENSCGRG00001018166Pabpc410097.139ENSUMAG00000019585PABPC410097.139Ursus_maritimus
ENSCGRG00001018166Pabpc47994.326ENSVPAG00000010041PABPC47394.326Vicugna_pacos
ENSCGRG00001018166Pabpc410097.289ENSVVUG00000005215PABPC410097.289Vulpes_vulpes
ENSCGRG00001018166Pabpc46397.024ENSXETG00000027221-10097.024Xenopus_tropicalis
ENSCGRG00001018166Pabpc49980.763ENSXETG00000010946pabpc49981.965Xenopus_tropicalis
ENSCGRG00001018166Pabpc49989.091ENSXCOG00000013190pabpc49690.094Xiphophorus_couchianus
ENSCGRG00001018166Pabpc410083.758ENSXMAG00000019007pabpc49884.878Xiphophorus_maculatus

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