EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00001018409 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Minus strand
Length: 8488 bases
Position: chrscaffold_8:2022680-2031167
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001018764	MMR_HSR1	PF01926.23	3.2e-06	1	1
ENSCGRP00001018769	MMR_HSR1	PF01926.23	3.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001023008	-	2491	-	ENSCGRP00001018764	369 (aa)	-	UPI000056562B
ENSCGRT00001023013	-	1110	-	ENSCGRP00001018769	369 (aa)	-	-

Gene Model

Click here to download ENSCGRG00001018409's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001018409's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00001018409	-	85	46.178	ENSCGRG00001008836	Sept9	55	46.178
ENSCGRG00001018409	-	68	40.226	ENSCGRG00001012476	Sept12	86	38.869
ENSCGRG00001018409	-	95	59.026	ENSCGRG00001009996	-	89	60.417
ENSCGRG00001018409	-	96	40.833	ENSCGRG00001020621	Sept8	78	41.954
ENSCGRG00001018409	-	77	44.948	ENSCGRG00001016435	Sept10	65	44.948
ENSCGRG00001018409	-	79	42.517	ENSCGRG00001018571	Sept14	67	42.517
ENSCGRG00001018409	-	97	76.359	ENSCGRG00001020635	Sept4	95	83.108
ENSCGRG00001018409	-	90	46.608	ENSCGRG00001018092	Sept3	85	49.511
ENSCGRG00001018409	-	93	63.739	ENSCGRG00001003374	Sept1	95	62.248
ENSCGRG00001018409	-	90	40.828	ENSCGRG00001000184	Sept11	78	41.493
ENSCGRG00001018409	-	90	41.716	ENSCGRG00001014207	Sept6	76	41.791
ENSCGRG00001018409	-	89	55.758	ENSCGRG00001005335	Sept7	69	59.150

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001018409	-	100	98.916	ENSG00000184702	SEPT5	100	99.003	Homo_sapiens
ENSCGRG00001018409	-	96	82.768	ENSAPOG00000004707	sept5b	94	81.818	Acanthochromis_polyacanthus
ENSCGRG00001018409	-	100	86.721	ENSAPOG00000021568	sept5a	97	87.744	Acanthochromis_polyacanthus
ENSCGRG00001018409	-	98	94.766	ENSAMEG00000011509	-	87	94.766	Ailuropoda_melanoleuca
ENSCGRG00001018409	-	86	82.704	ENSACIG00000000964	-	96	78.655	Amphilophus_citrinellus
ENSCGRG00001018409	-	95	90.000	ENSACIG00000006554	sept5a	95	90.882	Amphilophus_citrinellus
ENSCGRG00001018409	-	91	85.329	ENSAOCG00000019424	sept5b	90	85.251	Amphiprion_ocellaris
ENSCGRG00001018409	-	100	86.721	ENSAOCG00000015062	sept5a	97	87.744	Amphiprion_ocellaris
ENSCGRG00001018409	-	100	78.862	ENSAPEG00000008250	sept5b	94	82.102	Amphiprion_percula
ENSCGRG00001018409	-	100	86.721	ENSAPEG00000017611	sept5a	97	87.744	Amphiprion_percula
ENSCGRG00001018409	-	91	85.329	ENSATEG00000006356	sept5b	97	81.616	Anabas_testudineus
ENSCGRG00001018409	-	100	86.992	ENSATEG00000020583	sept5a	97	88.022	Anabas_testudineus
ENSCGRG00001018409	-	91	94.643	ENSAPLG00000016224	-	97	94.721	Anas_platyrhynchos
ENSCGRG00001018409	-	96	93.220	ENSACAG00000000290	-	79	93.315	Anolis_carolinensis
ENSCGRG00001018409	-	95	98.860	ENSANAG00000025950	-	100	92.405	Aotus_nancymaae
ENSCGRG00001018409	-	96	80.508	ENSACLG00000008299	sept5b	97	80.501	Astatotilapia_calliptera
ENSCGRG00001018409	-	100	86.992	ENSACLG00000011272	sept5a	94	90.855	Astatotilapia_calliptera
ENSCGRG00001018409	-	100	86.179	ENSAMXG00000006159	sept5a	96	87.187	Astyanax_mexicanus
ENSCGRG00001018409	-	100	98.374	ENSBTAG00000008320	SEPT5	100	98.374	Bos_taurus
ENSCGRG00001018409	-	100	98.916	ENSCJAG00000031147	-	100	98.916	Callithrix_jacchus
ENSCGRG00001018409	-	95	99.145	ENSCAFG00000014533	SEPT5	93	99.145	Canis_familiaris
ENSCGRG00001018409	-	100	99.187	ENSCAFG00020007897	-	100	99.187	Canis_lupus_dingo
ENSCGRG00001018409	-	95	93.503	ENSCHIG00000000129	-	90	93.503	Capra_hircus
ENSCGRG00001018409	-	95	99.430	ENSTSYG00000037551	-	93	99.430	Carlito_syrichta
ENSCGRG00001018409	-	83	99.023	ENSCAPG00000006545	-	100	99.023	Cavia_aperea
ENSCGRG00001018409	-	100	99.187	ENSCPOG00000010483	-	100	99.187	Cavia_porcellus
ENSCGRG00001018409	-	100	98.916	ENSCCAG00000036918	-	100	98.916	Cebus_capucinus
ENSCGRG00001018409	-	100	98.916	ENSCATG00000040593	-	100	98.916	Cercocebus_atys
ENSCGRG00001018409	-	100	98.645	ENSCLAG00000015333	-	100	98.645	Chinchilla_lanigera
ENSCGRG00001018409	-	100	98.916	ENSCSAG00000011732	-	100	98.916	Chlorocebus_sabaeus
ENSCGRG00001018409	-	96	94.350	ENSCPBG00000010660	-	97	94.429	Chrysemys_picta_bellii
ENSCGRG00001018409	-	95	98.291	ENSCANG00000030373	-	98	95.798	Colobus_angolensis_palliatus
ENSCGRG00001018409	-	95	96.857	ENSCGRG00000011656	-	93	96.857	Cricetulus_griseus_crigri
ENSCGRG00001018409	-	100	81.769	ENSCSEG00000019641	sept5a	96	86.726	Cynoglossus_semilaevis
ENSCGRG00001018409	-	80	87.838	ENSCSEG00000009877	-	91	87.838	Cynoglossus_semilaevis
ENSCGRG00001018409	-	100	86.450	ENSCVAG00000017986	sept5a	97	87.744	Cyprinodon_variegatus
ENSCGRG00001018409	-	100	85.095	ENSDARG00000013843	sept5a	87	86.072	Danio_rerio
ENSCGRG00001018409	-	100	84.824	ENSDARG00000036031	sept5b	100	84.133	Danio_rerio
ENSCGRG00001018409	-	100	99.729	ENSDORG00000013930	-	100	99.729	Dipodomys_ordii
ENSCGRG00001018409	-	87	98.447	ENSEASG00005010502	-	96	98.447	Equus_asinus_asinus
ENSCGRG00001018409	-	100	98.916	ENSECAG00000020718	-	70	98.916	Equus_caballus
ENSCGRG00001018409	-	96	81.921	ENSELUG00000005164	sept5b	96	82.173	Esox_lucius
ENSCGRG00001018409	-	94	88.793	ENSELUG00000009028	sept5a	90	89.676	Esox_lucius
ENSCGRG00001018409	-	100	97.561	ENSFCAG00000035936	-	100	97.561	Felis_catus
ENSCGRG00001018409	-	96	93.220	ENSFALG00000008028	-	97	93.315	Ficedula_albicollis
ENSCGRG00001018409	-	96	99.153	ENSFDAG00000014909	-	100	99.153	Fukomys_damarensis
ENSCGRG00001018409	-	91	74.030	ENSFHEG00000003693	sept5b	98	74.582	Fundulus_heteroclitus
ENSCGRG00001018409	-	95	89.398	ENSFHEG00000018533	sept5a	95	90.294	Fundulus_heteroclitus
ENSCGRG00001018409	-	96	93.503	ENSGALG00000001688	SEPT5	97	93.593	Gallus_gallus
ENSCGRG00001018409	-	100	87.263	ENSGAFG00000000767	sept5a	95	91.150	Gambusia_affinis
ENSCGRG00001018409	-	95	79.261	ENSGAFG00000007663	sept5b	90	79.261	Gambusia_affinis
ENSCGRG00001018409	-	94	89.337	ENSGACG00000005538	sept5a	100	87.324	Gasterosteus_aculeatus
ENSCGRG00001018409	-	96	94.350	ENSGAGG00000014385	-	90	95.015	Gopherus_agassizii
ENSCGRG00001018409	-	99	96.175	ENSGGOG00000016545	-	99	96.175	Gorilla_gorilla
ENSCGRG00001018409	-	96	80.791	ENSHBUG00000007908	sept5b	97	80.780	Haplochromis_burtoni
ENSCGRG00001018409	-	100	99.187	ENSHGLG00000013741	-	100	99.187	Heterocephalus_glaber_female
ENSCGRG00001018409	-	100	86.450	ENSHCOG00000005881	sept5a	97	87.187	Hippocampus_comes
ENSCGRG00001018409	-	94	79.191	ENSIPUG00000025006	sept5a	92	60.119	Ictalurus_punctatus
ENSCGRG00001018409	-	100	99.458	ENSSTOG00000010725	-	100	99.458	Ictidomys_tridecemlineatus
ENSCGRG00001018409	-	100	99.458	ENSJJAG00000000091	-	100	99.458	Jaculus_jaculus
ENSCGRG00001018409	-	100	87.263	ENSKMAG00000003408	sept5a	97	88.022	Kryptolebias_marmoratus
ENSCGRG00001018409	-	90	83.988	ENSLBEG00000028216	-	90	83.929	Labrus_bergylta
ENSCGRG00001018409	-	100	86.179	ENSLBEG00000025389	sept5a	97	86.908	Labrus_bergylta
ENSCGRG00001018409	-	97	88.268	ENSLACG00000015559	sept5b	91	88.268	Latimeria_chalumnae
ENSCGRG00001018409	-	100	98.113	ENSLAFG00000028004	-	100	98.113	Loxodonta_africana
ENSCGRG00001018409	-	100	98.916	ENSMFAG00000038117	-	100	98.916	Macaca_fascicularis
ENSCGRG00001018409	-	100	98.916	ENSMMUG00000017134	-	100	98.916	Macaca_mulatta
ENSCGRG00001018409	-	100	98.916	ENSMNEG00000036305	-	100	98.916	Macaca_nemestrina
ENSCGRG00001018409	-	96	98.584	ENSMLEG00000029088	-	100	98.860	Mandrillus_leucophaeus
ENSCGRG00001018409	-	100	86.992	ENSMAMG00000014426	sept5a	97	88.022	Mastacembelus_armatus
ENSCGRG00001018409	-	95	81.818	ENSMAMG00000006704	sept5b	99	81.818	Mastacembelus_armatus
ENSCGRG00001018409	-	96	80.226	ENSMZEG00005011980	sept5b	97	80.223	Maylandia_zebra
ENSCGRG00001018409	-	100	86.992	ENSMZEG00005009762	sept5a	97	87.744	Maylandia_zebra
ENSCGRG00001018409	-	93	91.040	ENSMGAG00000001319	-	93	93.023	Meleagris_gallopavo
ENSCGRG00001018409	-	100	100.000	ENSMAUG00000014786	-	100	100.000	Mesocricetus_auratus
ENSCGRG00001018409	-	95	99.145	ENSMICG00000028407	-	93	99.145	Microcebus_murinus
ENSCGRG00001018409	-	100	100.000	ENSMOCG00000000071	-	100	100.000	Microtus_ochrogaster
ENSCGRG00001018409	-	96	78.249	ENSMMOG00000010567	sept5b	97	78.273	Mola_mola
ENSCGRG00001018409	-	95	89.429	ENSMMOG00000011704	sept5a	96	90.560	Mola_mola
ENSCGRG00001018409	-	99	86.813	ENSMALG00000020359	sept5a	91	94.521	Monopterus_albus
ENSCGRG00001018409	-	96	81.356	ENSMALG00000005830	sept5b	94	84.071	Monopterus_albus
ENSCGRG00001018409	-	100	100.000	MGP_CAROLIEiJ_G0020551	-	100	100.000	Mus_caroli
ENSCGRG00001018409	-	91	99.701	ENSMUSG00000116594	AC133488.1	92	99.701	Mus_musculus
ENSCGRG00001018409	-	100	100.000	ENSMUSG00000072214	Sept5	100	100.000	Mus_musculus
ENSCGRG00001018409	-	100	100.000	MGP_PahariEiJ_G0016256	-	100	100.000	Mus_pahari
ENSCGRG00001018409	-	100	100.000	MGP_SPRETEiJ_G0021446	-	100	100.000	Mus_spretus
ENSCGRG00001018409	-	87	99.068	ENSMPUG00000003893	-	100	99.068	Mustela_putorius_furo
ENSCGRG00001018409	-	95	98.860	ENSMLUG00000002506	-	89	98.860	Myotis_lucifugus
ENSCGRG00001018409	-	100	99.729	ENSNGAG00000013782	-	100	99.729	Nannospalax_galili
ENSCGRG00001018409	-	99	87.671	ENSNBRG00000018717	sept5a	94	90.855	Neolamprologus_brichardi
ENSCGRG00001018409	-	96	80.226	ENSNBRG00000004761	sept5b	97	80.223	Neolamprologus_brichardi
ENSCGRG00001018409	-	81	97.651	ENSNLEG00000005511	-	92	97.980	Nomascus_leucogenys
ENSCGRG00001018409	-	92	95.601	ENSMEUG00000015556	-	97	95.601	Notamacropus_eugenii
ENSCGRG00001018409	-	95	96.296	ENSOPRG00000007708	-	100	96.296	Ochotona_princeps
ENSCGRG00001018409	-	100	99.187	ENSODEG00000016498	-	100	99.187	Octodon_degus
ENSCGRG00001018409	-	96	81.073	ENSONIG00000011388	sept5b	97	81.058	Oreochromis_niloticus
ENSCGRG00001018409	-	96	80.226	ENSORLG00000001081	sept5b	97	80.223	Oryzias_latipes
ENSCGRG00001018409	-	100	86.992	ENSORLG00000024104	sept5a	95	91.150	Oryzias_latipes
ENSCGRG00001018409	-	91	82.934	ENSORLG00020016872	sept5b	94	81.609	Oryzias_latipes_hni
ENSCGRG00001018409	-	100	86.992	ENSORLG00020005445	sept5a	95	91.150	Oryzias_latipes_hni
ENSCGRG00001018409	-	96	80.226	ENSORLG00015003711	sept5b	97	80.223	Oryzias_latipes_hsok
ENSCGRG00001018409	-	100	86.992	ENSORLG00015015192	sept5a	97	88.022	Oryzias_latipes_hsok
ENSCGRG00001018409	-	100	86.992	ENSOMEG00000017874	sept5a	96	91.150	Oryzias_melastigma
ENSCGRG00001018409	-	73	82.222	ENSOMEG00000022819	sept5b	89	82.222	Oryzias_melastigma
ENSCGRG00001018409	-	99	96.185	ENSOGAG00000026834	-	97	96.359	Otolemur_garnettii
ENSCGRG00001018409	-	100	98.916	ENSPPAG00000042516	-	100	98.916	Pan_paniscus
ENSCGRG00001018409	-	100	99.458	ENSPPRG00000002930	-	100	99.458	Panthera_pardus
ENSCGRG00001018409	-	95	99.430	ENSPTIG00000019967	-	93	99.430	Panthera_tigris_altaica
ENSCGRG00001018409	-	100	98.916	ENSPTRG00000014066	-	100	98.916	Pan_troglodytes
ENSCGRG00001018409	-	100	98.916	ENSPANG00000001023	-	100	98.916	Papio_anubis
ENSCGRG00001018409	-	100	88.076	ENSPKIG00000024641	sept5b	97	88.579	Paramormyrops_kingsleyae
ENSCGRG00001018409	-	83	94.788	ENSPSIG00000002889	-	97	94.872	Pelodiscus_sinensis
ENSCGRG00001018409	-	94	90.517	ENSPMGG00000018375	sept5a	97	87.921	Periophthalmus_magnuspinnatus
ENSCGRG00001018409	-	95	81.818	ENSPMGG00000021306	sept5b	96	81.793	Periophthalmus_magnuspinnatus
ENSCGRG00001018409	-	96	100.000	ENSPEMG00000013636	-	100	100.000	Peromyscus_maniculatus_bairdii
ENSCGRG00001018409	-	100	87.534	ENSPFOG00000011811	sept5a	97	88.301	Poecilia_formosa
ENSCGRG00001018409	-	96	80.226	ENSPFOG00000016894	sept5b	97	80.223	Poecilia_formosa
ENSCGRG00001018409	-	96	79.603	ENSPLAG00000005877	sept5b	96	79.609	Poecilia_latipinna
ENSCGRG00001018409	-	96	89.802	ENSPLAG00000018547	sept5a	97	90.671	Poecilia_latipinna
ENSCGRG00001018409	-	63	81.034	ENSPMEG00000017826	sept5b	92	81.034	Poecilia_mexicana
ENSCGRG00001018409	-	100	87.263	ENSPMEG00000004070	sept5a	97	88.022	Poecilia_mexicana
ENSCGRG00001018409	-	96	79.213	ENSPREG00000013868	sept5b	95	79.224	Poecilia_reticulata
ENSCGRG00001018409	-	95	90.258	ENSPREG00000011585	sept5a	90	91.150	Poecilia_reticulata
ENSCGRG00001018409	-	60	98.190	ENSPPYG00000011583	-	86	98.190	Pongo_abelii
ENSCGRG00001018409	-	100	99.187	ENSPCOG00000012479	-	100	99.187	Propithecus_coquereli
ENSCGRG00001018409	-	99	96.154	ENSPVAG00000012974	-	90	96.154	Pteropus_vampyrus
ENSCGRG00001018409	-	96	80.226	ENSPNYG00000010341	sept5b	96	83.432	Pundamilia_nyererei
ENSCGRG00001018409	-	95	89.971	ENSPNYG00000008373	sept5a	95	90.855	Pundamilia_nyererei
ENSCGRG00001018409	-	100	86.721	ENSPNAG00000007785	sept5a	97	87.744	Pygocentrus_nattereri
ENSCGRG00001018409	-	100	86.450	ENSPNAG00000001270	sept5b	97	86.908	Pygocentrus_nattereri
ENSCGRG00001018409	-	100	99.458	ENSRNOG00000029912	Sept5	100	99.458	Rattus_norvegicus
ENSCGRG00001018409	-	100	98.916	ENSRBIG00000041362	-	93	98.860	Rhinopithecus_bieti
ENSCGRG00001018409	-	100	96.042	ENSRROG00000041246	-	100	96.042	Rhinopithecus_roxellana
ENSCGRG00001018409	-	96	98.876	ENSSBOG00000027910	-	100	98.876	Saimiri_boliviensis_boliviensis
ENSCGRG00001018409	-	92	94.395	ENSSHAG00000011753	-	92	94.805	Sarcophilus_harrisii
ENSCGRG00001018409	-	100	88.618	ENSSFOG00015014043	sept5	95	91.740	Scleropages_formosus
ENSCGRG00001018409	-	95	89.971	ENSSMAG00000006148	sept5a	90	90.855	Scophthalmus_maximus
ENSCGRG00001018409	-	96	81.073	ENSSMAG00000009333	sept5b	97	81.058	Scophthalmus_maximus
ENSCGRG00001018409	-	95	87.106	ENSSDUG00000002398	sept5a	95	89.458	Seriola_dumerili
ENSCGRG00001018409	-	96	82.768	ENSSDUG00000006594	sept5b	97	82.730	Seriola_dumerili
ENSCGRG00001018409	-	95	89.685	ENSSLDG00000003964	sept5a	97	85.515	Seriola_lalandi_dorsalis
ENSCGRG00001018409	-	93	83.908	ENSSLDG00000005541	sept5b	77	84.150	Seriola_lalandi_dorsalis
ENSCGRG00001018409	-	91	94.048	ENSSPUG00000015346	-	97	94.135	Sphenodon_punctatus
ENSCGRG00001018409	-	95	89.685	ENSSPAG00000015627	sept5a	90	90.855	Stegastes_partitus
ENSCGRG00001018409	-	91	86.228	ENSSPAG00000000073	sept5b	90	86.136	Stegastes_partitus
ENSCGRG00001018409	-	96	98.305	ENSSSCG00000010128	-	100	91.940	Sus_scrofa
ENSCGRG00001018409	-	95	91.977	ENSTGUG00000008412	-	90	92.090	Taeniopygia_guttata
ENSCGRG00001018409	-	95	89.112	ENSTRUG00000016478	sept5a	96	89.474	Takifugu_rubripes
ENSCGRG00001018409	-	94	80.460	ENSTRUG00000018608	sept5b	95	80.453	Takifugu_rubripes
ENSCGRG00001018409	-	100	81.233	ENSTNIG00000015926	sept5a	97	81.818	Tetraodon_nigroviridis
ENSCGRG00001018409	-	96	80.000	ENSTNIG00000013578	sept5b	97	80.000	Tetraodon_nigroviridis
ENSCGRG00001018409	-	95	99.145	ENSUAMG00000011220	-	93	99.145	Ursus_americanus
ENSCGRG00001018409	-	95	99.145	ENSVVUG00000025380	-	88	99.145	Vulpes_vulpes
ENSCGRG00001018409	-	97	93.036	ENSXETG00000030888	sept5	97	93.036	Xenopus_tropicalis
ENSCGRG00001018409	-	99	87.158	ENSXCOG00000002175	sept5a	96	90.855	Xiphophorus_couchianus
ENSCGRG00001018409	-	91	81.953	ENSXCOG00000016246	sept5b	96	81.924	Xiphophorus_couchianus
ENSCGRG00001018409	-	100	86.992	ENSXMAG00000014644	sept5a	95	90.855	Xiphophorus_maculatus
ENSCGRG00001018409	-	96	79.661	ENSXMAG00000016115	sept5b	96	81.924	Xiphophorus_maculatus