EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00001018502 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: pre-mRNA processing factor 38A
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Plus strand
Length: 17856 bases
Position: chrscaffold_2:41679795-41697650
Accession: 100755230
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001018902	PRP38	PF03371.15	1.5e-62	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001023146	-	4669	-	ENSCGRP00001018902	312 (aa)	XP_003496553	G3GW00

Gene Model

Click here to download ENSCGRG00001018502's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001018502's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00001018502	-	74	85.281	ENSCGRG00001002557	-	78	85.281

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001018502	-	100	99.679	ENSG00000134748	PRPF38A	100	99.679	Homo_sapiens
ENSCGRG00001018502	-	71	88.688	ENSAPOG00000011652	prpf38a	100	81.789	Acanthochromis_polyacanthus
ENSCGRG00001018502	-	100	99.679	ENSAMEG00000009319	PRPF38A	100	99.679	Ailuropoda_melanoleuca
ENSCGRG00001018502	-	71	86.425	ENSACIG00000012292	prpf38a	76	85.714	Amphilophus_citrinellus
ENSCGRG00001018502	-	71	88.688	ENSAOCG00000018004	prpf38a	100	81.789	Amphiprion_ocellaris
ENSCGRG00001018502	-	71	88.688	ENSAPEG00000021414	prpf38a	100	81.789	Amphiprion_percula
ENSCGRG00001018502	-	71	89.140	ENSATEG00000004608	prpf38a	100	81.789	Anabas_testudineus
ENSCGRG00001018502	-	79	97.976	ENSAPLG00000005827	PRPF38A	99	97.976	Anas_platyrhynchos
ENSCGRG00001018502	-	100	95.513	ENSACAG00000008249	PRPF38A	100	95.513	Anolis_carolinensis
ENSCGRG00001018502	-	100	99.679	ENSANAG00000027839	PRPF38A	100	99.679	Aotus_nancymaae
ENSCGRG00001018502	-	100	68.038	ENSANAG00000029204	-	100	62.658	Aotus_nancymaae
ENSCGRG00001018502	-	71	86.425	ENSACLG00000021595	prpf38a	100	80.192	Astatotilapia_calliptera
ENSCGRG00001018502	-	100	82.428	ENSAMXG00000029274	prpf38a	100	82.428	Astyanax_mexicanus
ENSCGRG00001018502	-	100	99.679	ENSBTAG00000002720	PRPF38A	100	99.679	Bos_taurus
ENSCGRG00001018502	-	63	62.564	WBGene00008380	prp-38	67	61.574	Caenorhabditis_elegans
ENSCGRG00001018502	-	100	99.679	ENSCJAG00000021594	PRPF38A	100	99.679	Callithrix_jacchus
ENSCGRG00001018502	-	100	99.679	ENSCAFG00000003740	PRPF38A	100	99.679	Canis_familiaris
ENSCGRG00001018502	-	100	99.679	ENSCAFG00020010939	PRPF38A	100	99.679	Canis_lupus_dingo
ENSCGRG00001018502	-	100	99.679	ENSCHIG00000024730	PRPF38A	100	99.679	Capra_hircus
ENSCGRG00001018502	-	100	99.679	ENSTSYG00000009868	-	100	99.679	Carlito_syrichta
ENSCGRG00001018502	-	86	98.513	ENSTSYG00000031994	-	95	98.513	Carlito_syrichta
ENSCGRG00001018502	-	100	99.679	ENSCPOG00000005079	PRPF38A	100	99.679	Cavia_porcellus
ENSCGRG00001018502	-	100	99.359	ENSCCAG00000026502	PRPF38A	100	99.359	Cebus_capucinus
ENSCGRG00001018502	-	100	99.679	ENSCATG00000032296	PRPF38A	100	99.679	Cercocebus_atys
ENSCGRG00001018502	-	100	64.103	ENSCATG00000044190	-	100	62.821	Cercocebus_atys
ENSCGRG00001018502	-	100	99.679	ENSCLAG00000005816	PRPF38A	100	99.679	Chinchilla_lanigera
ENSCGRG00001018502	-	78	97.917	ENSCHOG00000008388	PRPF38A	77	97.917	Choloepus_hoffmanni
ENSCGRG00001018502	-	100	98.397	ENSCPBG00000014791	PRPF38A	100	98.397	Chrysemys_picta_bellii
ENSCGRG00001018502	-	67	71.429	ENSCSAVG00000009580	-	78	65.678	Ciona_savignyi
ENSCGRG00001018502	-	96	99.666	ENSCANG00000032608	PRPF38A	100	99.666	Colobus_angolensis_palliatus
ENSCGRG00001018502	-	100	100.000	ENSCGRG00000014868	Prpf38a	100	100.000	Cricetulus_griseus_crigri
ENSCGRG00001018502	-	71	87.783	ENSCSEG00000001269	prpf38a	79	87.013	Cynoglossus_semilaevis
ENSCGRG00001018502	-	71	90.498	ENSCVAG00000012305	prpf38a	100	82.428	Cyprinodon_variegatus
ENSCGRG00001018502	-	100	81.789	ENSDARG00000039213	prpf38a	100	81.789	Danio_rerio
ENSCGRG00001018502	-	100	99.679	ENSDNOG00000042326	PRPF38A	100	99.679	Dasypus_novemcinctus
ENSCGRG00001018502	-	84	83.270	ENSDORG00000025371	-	78	87.665	Dipodomys_ordii
ENSCGRG00001018502	-	84	83.270	ENSDORG00000023691	-	78	87.665	Dipodomys_ordii
ENSCGRG00001018502	-	100	86.218	ENSDORG00000023857	-	100	86.218	Dipodomys_ordii
ENSCGRG00001018502	-	63	75.635	FBgn0050342	Prp38	57	76.596	Drosophila_melanogaster
ENSCGRG00001018502	-	76	81.092	ENSEBUG00000012588	prpf38a	75	81.116	Eptatretus_burgeri
ENSCGRG00001018502	-	100	99.679	ENSEASG00005014427	PRPF38A	100	99.679	Equus_asinus_asinus
ENSCGRG00001018502	-	100	99.679	ENSECAG00000022628	PRPF38A	100	99.679	Equus_caballus
ENSCGRG00001018502	-	71	86.878	ENSELUG00000021094	prpf38a	100	80.511	Esox_lucius
ENSCGRG00001018502	-	100	99.679	ENSFCAG00000002518	PRPF38A	100	99.679	Felis_catus
ENSCGRG00001018502	-	99	84.887	ENSFALG00000003612	-	77	90.043	Ficedula_albicollis
ENSCGRG00001018502	-	87	96.679	ENSFALG00000005598	-	100	96.679	Ficedula_albicollis
ENSCGRG00001018502	-	100	99.359	ENSFDAG00000011287	PRPF38A	100	99.359	Fukomys_damarensis
ENSCGRG00001018502	-	84	78.788	ENSFHEG00000014317	prpf38a	78	88.745	Fundulus_heteroclitus
ENSCGRG00001018502	-	53	94.578	ENSGMOG00000011384	prpf38a	54	94.578	Gadus_morhua
ENSCGRG00001018502	-	100	98.077	ENSGALG00000010627	PRPF38A	100	98.077	Gallus_gallus
ENSCGRG00001018502	-	71	90.498	ENSGAFG00000012422	prpf38a	100	82.428	Gambusia_affinis
ENSCGRG00001018502	-	71	86.099	ENSGACG00000005423	prpf38a	100	79.683	Gasterosteus_aculeatus
ENSCGRG00001018502	-	100	98.718	ENSGAGG00000020547	PRPF38A	100	98.718	Gopherus_agassizii
ENSCGRG00001018502	-	100	99.679	ENSGGOG00000003940	PRPF38A	100	99.679	Gorilla_gorilla
ENSCGRG00001018502	-	61	91.005	ENSHBUG00000020572	prpf38a	80	90.957	Haplochromis_burtoni
ENSCGRG00001018502	-	100	83.333	ENSHGLG00000007918	-	100	83.013	Heterocephalus_glaber_female
ENSCGRG00001018502	-	100	99.679	ENSHGLG00000000475	PRPF38A	100	99.679	Heterocephalus_glaber_female
ENSCGRG00001018502	-	100	83.333	ENSHGLG00100003928	-	100	83.013	Heterocephalus_glaber_male
ENSCGRG00001018502	-	100	99.679	ENSHGLG00100008935	PRPF38A	100	99.679	Heterocephalus_glaber_male
ENSCGRG00001018502	-	87	69.373	ENSHCOG00000020781	prpf38a	59	90.957	Hippocampus_comes
ENSCGRG00001018502	-	74	87.500	ENSIPUG00000005757	prpf38a	75	87.500	Ictalurus_punctatus
ENSCGRG00001018502	-	100	99.679	ENSSTOG00000015610	PRPF38A	100	99.679	Ictidomys_tridecemlineatus
ENSCGRG00001018502	-	100	99.038	ENSJJAG00000015811	Prpf38a	100	99.038	Jaculus_jaculus
ENSCGRG00001018502	-	71	90.045	ENSKMAG00000006588	prpf38a	100	82.109	Kryptolebias_marmoratus
ENSCGRG00001018502	-	96	79.195	ENSLBEG00000020585	prpf38a	100	79.553	Labrus_bergylta
ENSCGRG00001018502	-	100	92.308	ENSLACG00000011495	PRPF38A	100	92.308	Latimeria_chalumnae
ENSCGRG00001018502	-	100	80.192	ENSLOCG00000006262	prpf38a	100	81.470	Lepisosteus_oculatus
ENSCGRG00001018502	-	100	99.679	ENSLAFG00000025862	PRPF38A	100	99.679	Loxodonta_africana
ENSCGRG00001018502	-	100	99.679	ENSMFAG00000039449	PRPF38A	100	99.679	Macaca_fascicularis
ENSCGRG00001018502	-	87	98.897	ENSMMUG00000014333	PRPF38A	98	98.897	Macaca_mulatta
ENSCGRG00001018502	-	100	99.679	ENSMNEG00000031221	PRPF38A	100	99.679	Macaca_nemestrina
ENSCGRG00001018502	-	100	64.423	ENSMNEG00000040242	-	100	63.462	Macaca_nemestrina
ENSCGRG00001018502	-	100	99.679	ENSMLEG00000041105	PRPF38A	100	99.679	Mandrillus_leucophaeus
ENSCGRG00001018502	-	71	88.235	ENSMAMG00000015431	prpf38a	100	81.470	Mastacembelus_armatus
ENSCGRG00001018502	-	71	86.425	ENSMZEG00005017838	prpf38a	100	80.192	Maylandia_zebra
ENSCGRG00001018502	-	96	97.993	ENSMGAG00000011176	PRPF38A	100	97.993	Meleagris_gallopavo
ENSCGRG00001018502	-	85	95.076	ENSMAUG00000018029	-	87	95.238	Mesocricetus_auratus
ENSCGRG00001018502	-	100	99.679	ENSMICG00000014193	PRPF38A	100	99.679	Microcebus_murinus
ENSCGRG00001018502	-	100	100.000	ENSMOCG00000013080	Prpf38a	100	100.000	Microtus_ochrogaster
ENSCGRG00001018502	-	83	81.783	ENSMMOG00000016972	prpf38a	81	87.446	Mola_mola
ENSCGRG00001018502	-	100	98.083	ENSMODG00000000644	PRPF38A	100	98.083	Monodelphis_domestica
ENSCGRG00001018502	-	71	88.235	ENSMALG00000019363	prpf38a	97	81.470	Monopterus_albus
ENSCGRG00001018502	-	100	99.038	MGP_CAROLIEiJ_G0026269	Prpf38a	100	99.038	Mus_caroli
ENSCGRG00001018502	-	100	99.038	ENSMUSG00000063800	Prpf38a	100	99.038	Mus_musculus
ENSCGRG00001018502	-	100	99.038	MGP_PahariEiJ_G0028602	Prpf38a	100	99.038	Mus_pahari
ENSCGRG00001018502	-	100	98.718	MGP_SPRETEiJ_G0027238	Prpf38a	100	98.718	Mus_spretus
ENSCGRG00001018502	-	100	99.679	ENSMPUG00000006896	PRPF38A	100	99.679	Mustela_putorius_furo
ENSCGRG00001018502	-	100	100.000	ENSNGAG00000011884	Prpf38a	100	100.000	Nannospalax_galili
ENSCGRG00001018502	-	71	85.068	ENSNBRG00000004013	prpf38a	74	84.416	Neolamprologus_brichardi
ENSCGRG00001018502	-	97	73.510	ENSNLEG00000012592	-	99	73.510	Nomascus_leucogenys
ENSCGRG00001018502	-	93	99.654	ENSNLEG00000017999	PRPF38A	93	99.654	Nomascus_leucogenys
ENSCGRG00001018502	-	100	66.987	ENSNLEG00000033398	-	94	66.987	Nomascus_leucogenys
ENSCGRG00001018502	-	100	95.192	ENSMEUG00000003860	PRPF38A	100	95.192	Notamacropus_eugenii
ENSCGRG00001018502	-	77	100.000	ENSOPRG00000008985	PRPF38A	100	100.000	Ochotona_princeps
ENSCGRG00001018502	-	100	99.679	ENSODEG00000005869	PRPF38A	100	99.679	Octodon_degus
ENSCGRG00001018502	-	71	86.878	ENSONIG00000007816	prpf38a	100	80.511	Oreochromis_niloticus
ENSCGRG00001018502	-	100	65.287	ENSOANG00000009541	-	100	65.287	Ornithorhynchus_anatinus
ENSCGRG00001018502	-	100	99.679	ENSOCUG00000000963	PRPF38A	100	99.679	Oryctolagus_cuniculus
ENSCGRG00001018502	-	96	82.333	ENSORLG00000013485	prpf38a	99	82.372	Oryzias_latipes
ENSCGRG00001018502	-	96	82.333	ENSORLG00020002130	prpf38a	99	82.372	Oryzias_latipes_hni
ENSCGRG00001018502	-	96	82.000	ENSORLG00015021393	prpf38a	99	82.051	Oryzias_latipes_hsok
ENSCGRG00001018502	-	96	81.879	ENSOMEG00000016333	prpf38a	100	81.789	Oryzias_melastigma
ENSCGRG00001018502	-	100	99.679	ENSOGAG00000005423	PRPF38A	100	99.679	Otolemur_garnettii
ENSCGRG00001018502	-	100	99.679	ENSOARG00000005373	PRPF38A	100	99.679	Ovis_aries
ENSCGRG00001018502	-	100	77.244	ENSPPAG00000033867	-	100	77.244	Pan_paniscus
ENSCGRG00001018502	-	100	99.679	ENSPPAG00000030905	PRPF38A	100	99.679	Pan_paniscus
ENSCGRG00001018502	-	100	99.679	ENSPPRG00000013268	PRPF38A	100	99.679	Panthera_pardus
ENSCGRG00001018502	-	100	99.679	ENSPTIG00000015419	PRPF38A	100	99.679	Panthera_tigris_altaica
ENSCGRG00001018502	-	100	99.679	ENSPTRG00000000739	PRPF38A	100	99.679	Pan_troglodytes
ENSCGRG00001018502	-	100	99.679	ENSPANG00000015483	PRPF38A	100	99.679	Papio_anubis
ENSCGRG00001018502	-	100	78.846	ENSPKIG00000011439	prpf38a	100	80.128	Paramormyrops_kingsleyae
ENSCGRG00001018502	-	100	98.077	ENSPSIG00000017487	PRPF38A	100	98.077	Pelodiscus_sinensis
ENSCGRG00001018502	-	70	89.401	ENSPMGG00000021352	prpf38a	99	78.641	Periophthalmus_magnuspinnatus
ENSCGRG00001018502	-	100	93.968	ENSPEMG00000011212	-	100	93.968	Peromyscus_maniculatus_bairdii
ENSCGRG00001018502	-	100	100.000	ENSPEMG00000023277	-	100	100.000	Peromyscus_maniculatus_bairdii
ENSCGRG00001018502	-	100	97.764	ENSPCIG00000022369	-	100	97.764	Phascolarctos_cinereus
ENSCGRG00001018502	-	83	81.467	ENSPFOG00000004248	prpf38a	100	82.428	Poecilia_formosa
ENSCGRG00001018502	-	92	77.055	ENSPLAG00000010328	prpf38a	100	82.428	Poecilia_latipinna
ENSCGRG00001018502	-	84	79.323	ENSPMEG00000011804	prpf38a	100	82.428	Poecilia_mexicana
ENSCGRG00001018502	-	95	73.667	ENSPREG00000002835	prpf38a	58	94.149	Poecilia_reticulata
ENSCGRG00001018502	-	100	91.167	ENSPPYG00000001348	PRPF38A	100	91.167	Pongo_abelii
ENSCGRG00001018502	-	100	99.038	ENSPCAG00000013328	PRPF38A	100	99.038	Procavia_capensis
ENSCGRG00001018502	-	100	99.679	ENSPCOG00000016387	-	100	99.679	Propithecus_coquereli
ENSCGRG00001018502	-	100	76.603	ENSPCOG00000020709	-	76	80.952	Propithecus_coquereli
ENSCGRG00001018502	-	100	99.679	ENSPVAG00000009803	PRPF38A	100	99.679	Pteropus_vampyrus
ENSCGRG00001018502	-	71	86.425	ENSPNYG00000005571	prpf38a	100	80.192	Pundamilia_nyererei
ENSCGRG00001018502	-	100	82.428	ENSPNAG00000010399	prpf38a	100	82.428	Pygocentrus_nattereri
ENSCGRG00001018502	-	100	99.679	ENSRNOG00000009451	Prpf38a	100	99.679	Rattus_norvegicus
ENSCGRG00001018502	-	100	99.679	ENSRBIG00000036442	PRPF38A	100	99.679	Rhinopithecus_bieti
ENSCGRG00001018502	-	100	62.179	ENSRBIG00000034053	-	100	58.974	Rhinopithecus_bieti
ENSCGRG00001018502	-	100	99.679	ENSRROG00000032788	PRPF38A	100	99.679	Rhinopithecus_roxellana
ENSCGRG00001018502	-	98	78.431	ENSRROG00000040003	-	99	78.431	Rhinopithecus_roxellana
ENSCGRG00001018502	-	100	99.679	ENSSBOG00000019515	PRPF38A	100	99.679	Saimiri_boliviensis_boliviensis
ENSCGRG00001018502	-	96	71.053	ENSSHAG00000006029	-	74	81.900	Sarcophilus_harrisii
ENSCGRG00001018502	-	87	97.417	ENSSHAG00000006906	-	100	97.417	Sarcophilus_harrisii
ENSCGRG00001018502	-	100	78.914	ENSSFOG00015013572	prpf38a	100	79.553	Scleropages_formosus
ENSCGRG00001018502	-	71	88.688	ENSSMAG00000015379	prpf38a	75	87.879	Scophthalmus_maximus
ENSCGRG00001018502	-	71	89.140	ENSSDUG00000001324	prpf38a	100	82.109	Seriola_dumerili
ENSCGRG00001018502	-	71	89.140	ENSSLDG00000014803	prpf38a	100	82.109	Seriola_lalandi_dorsalis
ENSCGRG00001018502	-	100	82.372	ENSSARG00000014458	PRPF38A	100	82.372	Sorex_araneus
ENSCGRG00001018502	-	100	95.833	ENSSPUG00000013259	PRPF38A	100	95.833	Sphenodon_punctatus
ENSCGRG00001018502	-	71	70.588	ENSSPAG00000010449	prpf38a	100	64.103	Stegastes_partitus
ENSCGRG00001018502	-	100	99.679	ENSSSCG00000028288	PRPF38A	100	99.679	Sus_scrofa
ENSCGRG00001018502	-	100	93.590	ENSTGUG00000008995	PRPF38A	100	93.590	Taeniopygia_guttata
ENSCGRG00001018502	-	71	88.235	ENSTRUG00000003374	prpf38a	71	87.446	Takifugu_rubripes
ENSCGRG00001018502	-	71	86.547	ENSTNIG00000005533	prpf38a	100	80.000	Tetraodon_nigroviridis
ENSCGRG00001018502	-	100	99.038	ENSTBEG00000000725	PRPF38A	100	99.038	Tupaia_belangeri
ENSCGRG00001018502	-	100	99.679	ENSTTRG00000016139	PRPF38A	100	99.679	Tursiops_truncatus
ENSCGRG00001018502	-	100	99.679	ENSUAMG00000000625	PRPF38A	100	99.679	Ursus_americanus
ENSCGRG00001018502	-	100	99.679	ENSUMAG00000022674	PRPF38A	100	99.679	Ursus_maritimus
ENSCGRG00001018502	-	74	99.134	ENSVPAG00000000907	PRPF38A	100	93.910	Vicugna_pacos
ENSCGRG00001018502	-	100	99.679	ENSVVUG00000004475	PRPF38A	100	99.679	Vulpes_vulpes
ENSCGRG00001018502	-	100	84.345	ENSXETG00000008060	prpf38a	100	88.179	Xenopus_tropicalis
ENSCGRG00001018502	-	71	88.341	ENSXCOG00000007393	prpf38a	77	87.554	Xiphophorus_couchianus
ENSCGRG00001018502	-	71	90.498	ENSXMAG00000026143	prpf38a	100	82.428	Xiphophorus_maculatus