EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCGRG00001018540 (Gene tree)
Gene ID: -
Gene Symbol: Rbm42
Alias: 1700003D06Rik|3100004P22Rik
Full Name: RNA binding motif protein 42
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Plus strand
Length: 9968 bases
Position: chrscaffold_49:4987184-4997151
Accession: 1915285
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001018951	RRM_1	PF00076.22	5.7e-18	1	1
ENSCGRP00001018948	RRM_1	PF00076.22	6.2e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001023192	-	1967	-	ENSCGRP00001018948	478 (aa)	-	-
ENSCGRT00001023195	-	1350	-	ENSCGRP00001018951	449 (aa)	-	-

Gene Model

Click here to download ENSCGRG00001018540's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001018540's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001018540	Rbm42	99	96.667	ENSG00000126254	RBM42	100	100.000	Homo_sapiens
ENSCGRG00001018540	Rbm42	99	97.077	ENSAMEG00000000524	RBM42	100	97.077	Ailuropoda_melanoleuca
ENSCGRG00001018540	Rbm42	99	97.065	ENSANAG00000027537	RBM42	100	100.000	Aotus_nancymaae
ENSCGRG00001018540	Rbm42	99	96.436	ENSBTAG00000013440	RBM42	100	96.436	Bos_taurus
ENSCGRG00001018540	Rbm42	99	97.098	ENSCJAG00000010220	RBM42	100	100.000	Callithrix_jacchus
ENSCGRG00001018540	Rbm42	100	89.823	ENSCAFG00020018628	RBM42	96	100.000	Canis_lupus_dingo
ENSCGRG00001018540	Rbm42	99	96.429	ENSCHIG00000009518	RBM42	100	96.429	Capra_hircus
ENSCGRG00001018540	Rbm42	99	97.280	ENSTSYG00000014688	RBM42	100	100.000	Carlito_syrichta
ENSCGRG00001018540	Rbm42	81	97.668	ENSCAPG00000009566	RBM42	99	97.668	Cavia_aperea
ENSCGRG00001018540	Rbm42	99	96.659	ENSCPOG00000012365	RBM42	99	96.659	Cavia_porcellus
ENSCGRG00001018540	Rbm42	99	97.275	ENSCCAG00000034440	RBM42	100	100.000	Cebus_capucinus
ENSCGRG00001018540	Rbm42	99	96.842	ENSCATG00000041924	RBM42	100	100.000	Cercocebus_atys
ENSCGRG00001018540	Rbm42	100	96.018	ENSCLAG00000012865	RBM42	100	96.018	Chinchilla_lanigera
ENSCGRG00001018540	Rbm42	99	96.231	ENSCSAG00000004422	RBM42	100	96.231	Chlorocebus_sabaeus
ENSCGRG00001018540	Rbm42	99	87.975	ENSCANG00000030272	RBM42	100	87.975	Colobus_angolensis_palliatus
ENSCGRG00001018540	Rbm42	99	95.833	ENSDNOG00000037397	RBM42	100	95.833	Dasypus_novemcinctus
ENSCGRG00001018540	Rbm42	100	97.105	ENSDORG00000013001	Rbm42	100	97.105	Dipodomys_ordii
ENSCGRG00001018540	Rbm42	75	87.879	ENSETEG00000007878	RBM42	73	87.879	Echinops_telfairi
ENSCGRG00001018540	Rbm42	99	97.753	ENSEASG00005001074	RBM42	100	97.753	Equus_asinus_asinus
ENSCGRG00001018540	Rbm42	99	97.753	ENSECAG00000018215	RBM42	100	97.753	Equus_caballus
ENSCGRG00001018540	Rbm42	99	97.484	ENSFCAG00000006376	RBM42	100	100.000	Felis_catus
ENSCGRG00001018540	Rbm42	97	94.218	ENSFDAG00000007440	RBM42	100	94.678	Fukomys_damarensis
ENSCGRG00001018540	Rbm42	99	96.849	ENSGGOG00000009972	RBM42	100	100.000	Gorilla_gorilla
ENSCGRG00001018540	Rbm42	97	95.642	ENSHGLG00000008418	RBM42	99	95.536	Heterocephalus_glaber_female
ENSCGRG00001018540	Rbm42	97	95.642	ENSHGLG00100018667	RBM42	99	95.536	Heterocephalus_glaber_male
ENSCGRG00001018540	Rbm42	100	96.903	ENSSTOG00000013050	RBM42	100	96.903	Ictidomys_tridecemlineatus
ENSCGRG00001018540	Rbm42	99	97.085	ENSJJAG00000010421	Rbm42	99	97.085	Jaculus_jaculus
ENSCGRG00001018540	Rbm42	97	90.364	ENSLAFG00000014993	RBM42	100	91.232	Loxodonta_africana
ENSCGRG00001018540	Rbm42	99	96.842	ENSMFAG00000002758	RBM42	100	100.000	Macaca_fascicularis
ENSCGRG00001018540	Rbm42	99	96.458	ENSMMUG00000018954	RBM42	100	100.000	Macaca_mulatta
ENSCGRG00001018540	Rbm42	100	96.444	ENSMNEG00000030009	RBM42	100	100.000	Macaca_nemestrina
ENSCGRG00001018540	Rbm42	99	96.842	ENSMLEG00000036119	RBM42	100	100.000	Mandrillus_leucophaeus
ENSCGRG00001018540	Rbm42	99	97.484	ENSMICG00000009880	RBM42	100	100.000	Microcebus_murinus
ENSCGRG00001018540	Rbm42	100	98.954	ENSMOCG00000000405	Rbm42	100	98.954	Microtus_ochrogaster
ENSCGRG00001018540	Rbm42	99	98.113	MGP_CAROLIEiJ_G0029536	Rbm42	99	98.113	Mus_caroli
ENSCGRG00001018540	Rbm42	99	98.113	ENSMUSG00000036733	Rbm42	99	98.113	Mus_musculus
ENSCGRG00001018540	Rbm42	99	98.113	MGP_PahariEiJ_G0012770	Rbm42	99	98.113	Mus_pahari
ENSCGRG00001018540	Rbm42	99	98.113	MGP_SPRETEiJ_G0030632	Rbm42	99	98.113	Mus_spretus
ENSCGRG00001018540	Rbm42	99	97.545	ENSMPUG00000006288	RBM42	100	97.545	Mustela_putorius_furo
ENSCGRG00001018540	Rbm42	99	96.436	ENSMLUG00000011334	RBM42	100	96.436	Myotis_lucifugus
ENSCGRG00001018540	Rbm42	100	96.862	ENSNGAG00000019698	Rbm42	100	96.862	Nannospalax_galili
ENSCGRG00001018540	Rbm42	70	98.204	ENSNLEG00000011272	-	94	91.341	Nomascus_leucogenys
ENSCGRG00001018540	Rbm42	95	83.224	ENSMEUG00000016300	RBM42	100	84.310	Notamacropus_eugenii
ENSCGRG00001018540	Rbm42	99	93.291	ENSOPRG00000001229	RBM42	100	91.405	Ochotona_princeps
ENSCGRG00001018540	Rbm42	100	96.239	ENSODEG00000013705	RBM42	99	96.239	Octodon_degus
ENSCGRG00001018540	Rbm42	99	95.787	ENSOCUG00000003337	RBM42	100	95.787	Oryctolagus_cuniculus
ENSCGRG00001018540	Rbm42	99	96.017	ENSOGAG00000004144	RBM42	100	96.017	Otolemur_garnettii
ENSCGRG00001018540	Rbm42	97	88.437	ENSOARG00000004926	RBM42	99	91.441	Ovis_aries
ENSCGRG00001018540	Rbm42	99	97.071	ENSPPAG00000037315	RBM42	100	100.000	Pan_paniscus
ENSCGRG00001018540	Rbm42	99	97.484	ENSPPRG00000016784	RBM42	100	100.000	Panthera_pardus
ENSCGRG00001018540	Rbm42	99	97.065	ENSPTIG00000019270	RBM42	100	100.000	Panthera_tigris_altaica
ENSCGRG00001018540	Rbm42	99	97.053	ENSPTRG00000010852	RBM42	100	100.000	Pan_troglodytes
ENSCGRG00001018540	Rbm42	99	96.835	ENSPANG00000017032	RBM42	100	100.000	Papio_anubis
ENSCGRG00001018540	Rbm42	100	98.954	ENSPEMG00000012065	Rbm42	100	98.954	Peromyscus_maniculatus_bairdii
ENSCGRG00001018540	Rbm42	99	95.670	ENSPPYG00000009871	RBM42	100	95.670	Pongo_abelii
ENSCGRG00001018540	Rbm42	88	95.410	ENSPCAG00000013053	RBM42	100	81.342	Procavia_capensis
ENSCGRG00001018540	Rbm42	70	99.099	ENSPCOG00000020672	RBM42	81	99.099	Propithecus_coquereli
ENSCGRG00001018540	Rbm42	99	97.904	ENSPCOG00000026433	-	100	100.000	Propithecus_coquereli
ENSCGRG00001018540	Rbm42	99	97.275	ENSPVAG00000012815	RBM42	100	97.275	Pteropus_vampyrus
ENSCGRG00001018540	Rbm42	99	98.323	ENSRNOG00000024278	Rbm42	99	98.323	Rattus_norvegicus
ENSCGRG00001018540	Rbm42	99	96.842	ENSRBIG00000007566	RBM42	100	100.000	Rhinopithecus_bieti
ENSCGRG00001018540	Rbm42	99	97.071	ENSRROG00000042313	RBM42	100	100.000	Rhinopithecus_roxellana
ENSCGRG00001018540	Rbm42	85	98.522	ENSSBOG00000030666	RBM42	100	98.522	Saimiri_boliviensis_boliviensis
ENSCGRG00001018540	Rbm42	99	86.875	ENSSARG00000010724	RBM42	100	86.875	Sorex_araneus
ENSCGRG00001018540	Rbm42	99	96.429	ENSSSCG00000002905	RBM42	100	96.429	Sus_scrofa
ENSCGRG00001018540	Rbm42	99	97.275	ENSUAMG00000020711	RBM42	100	97.275	Ursus_americanus
ENSCGRG00001018540	Rbm42	99	97.275	ENSUMAG00000020223	RBM42	100	97.275	Ursus_maritimus
ENSCGRG00001018540	Rbm42	99	96.875	ENSVVUG00000015117	RBM42	100	96.875	Vulpes_vulpes