EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCGRG00001018805 (Gene tree)
Gene ID: -
Gene Symbol: Zc3hc1
Alias: 1110054L24Rik|HSPC216|Nipa
Full Name: zinc finger C3HC-type containing 1
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Minus strand
Length: 26430 bases
Position: chrscaffold_14:32052082-32078511
Accession: 100755531
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001019355	zf-C3HC	PF07967.13	3.9e-36	1	1
ENSCGRP00001019347	zf-C3HC	PF07967.13	4.4e-36	1	1
ENSCGRP00001019354	zf-C3HC	PF07967.13	7e-36	1	1
ENSCGRP00001019355	Rsm1	PF08600.10	1.3e-16	1	2
ENSCGRP00001019355	Rsm1	PF08600.10	1.3e-16	2	2
ENSCGRP00001019347	Rsm1	PF08600.10	1.5e-16	1	1
ENSCGRP00001019354	Rsm1	PF08600.10	3.2e-15	1	2
ENSCGRP00001019354	Rsm1	PF08600.10	3.2e-15	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001023599	-	1446	-	ENSCGRP00001019355	481 (aa)	-	-
ENSCGRT00001023598	-	1293	-	ENSCGRP00001019354	430 (aa)	-	-
ENSCGRT00001023591	-	1506	-	ENSCGRP00001019347	501 (aa)	XP_003497582	G3GZ63

Gene Model

Click here to download ENSCGRG00001018805's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001018805's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001018805	Zc3hc1	99	87.026	ENSG00000091732	ZC3HC1	99	87.026	Homo_sapiens
ENSCGRG00001018805	Zc3hc1	94	46.269	ENSAPOG00000009078	zc3hc1	95	44.016	Acanthochromis_polyacanthus
ENSCGRG00001018805	Zc3hc1	100	85.913	ENSAMEG00000005425	ZC3HC1	100	85.913	Ailuropoda_melanoleuca
ENSCGRG00001018805	Zc3hc1	95	42.828	ENSACIG00000019513	zc3hc1	95	42.828	Amphilophus_citrinellus
ENSCGRG00001018805	Zc3hc1	94	47.164	ENSAOCG00000024310	zc3hc1	95	44.828	Amphiprion_ocellaris
ENSCGRG00001018805	Zc3hc1	94	47.164	ENSAPEG00000004907	zc3hc1	95	44.828	Amphiprion_percula
ENSCGRG00001018805	Zc3hc1	84	46.934	ENSATEG00000016898	zc3hc1	85	46.934	Anabas_testudineus
ENSCGRG00001018805	Zc3hc1	88	59.101	ENSAPLG00000003832	ZC3HC1	99	59.101	Anas_platyrhynchos
ENSCGRG00001018805	Zc3hc1	95	62.887	ENSACAG00000001638	ZC3HC1	95	62.887	Anolis_carolinensis
ENSCGRG00001018805	Zc3hc1	100	85.383	ENSANAG00000022213	ZC3HC1	99	87.317	Aotus_nancymaae
ENSCGRG00001018805	Zc3hc1	83	48.966	ENSACLG00000025033	zc3hc1	94	45.089	Astatotilapia_calliptera
ENSCGRG00001018805	Zc3hc1	94	43.844	ENSAMXG00000036792	zc3hc1	97	43.333	Astyanax_mexicanus
ENSCGRG00001018805	Zc3hc1	100	86.056	ENSBTAG00000011247	ZC3HC1	100	86.056	Bos_taurus
ENSCGRG00001018805	Zc3hc1	100	86.255	ENSCJAG00000010536	ZC3HC1	99	87.317	Callithrix_jacchus
ENSCGRG00001018805	Zc3hc1	100	87.525	ENSCAFG00000001499	-	99	87.525	Canis_familiaris
ENSCGRG00001018805	Zc3hc1	100	88.446	ENSCAFG00000031850	-	100	88.446	Canis_familiaris
ENSCGRG00001018805	Zc3hc1	100	88.048	ENSCAFG00000028735	-	100	88.048	Canis_familiaris
ENSCGRG00001018805	Zc3hc1	100	88.048	ENSCAFG00000029401	-	99	88.048	Canis_familiaris
ENSCGRG00001018805	Zc3hc1	100	86.508	ENSCAFG00020023333	-	100	86.508	Canis_lupus_dingo
ENSCGRG00001018805	Zc3hc1	100	88.247	ENSCAFG00020006829	-	100	88.247	Canis_lupus_dingo
ENSCGRG00001018805	Zc3hc1	100	79.880	ENSCHIG00000014103	ZC3HC1	100	79.880	Capra_hircus
ENSCGRG00001018805	Zc3hc1	100	83.466	ENSTSYG00000002843	ZC3HC1	100	83.466	Carlito_syrichta
ENSCGRG00001018805	Zc3hc1	89	65.789	ENSCAPG00000016300	ZC3HC1	100	66.372	Cavia_aperea
ENSCGRG00001018805	Zc3hc1	100	82.647	ENSCPOG00000014034	ZC3HC1	100	81.873	Cavia_porcellus
ENSCGRG00001018805	Zc3hc1	100	69.124	ENSCCAG00000020384	ZC3HC1	100	88.546	Cebus_capucinus
ENSCGRG00001018805	Zc3hc1	100	87.052	ENSCATG00000023130	ZC3HC1	100	87.052	Cercocebus_atys
ENSCGRG00001018805	Zc3hc1	100	61.477	ENSCLAG00000008260	ZC3HC1	100	61.677	Chinchilla_lanigera
ENSCGRG00001018805	Zc3hc1	73	86.612	ENSCSAG00000009881	ZC3HC1	97	86.612	Chlorocebus_sabaeus
ENSCGRG00001018805	Zc3hc1	90	86.031	ENSCHOG00000011846	ZC3HC1	99	86.031	Choloepus_hoffmanni
ENSCGRG00001018805	Zc3hc1	96	66.872	ENSCPBG00000017519	ZC3HC1	97	66.872	Chrysemys_picta_bellii
ENSCGRG00001018805	Zc3hc1	100	86.853	ENSCANG00000029091	ZC3HC1	100	86.853	Colobus_angolensis_palliatus
ENSCGRG00001018805	Zc3hc1	100	98.802	ENSCGRG00000017114	Zc3hc1	100	98.802	Cricetulus_griseus_crigri
ENSCGRG00001018805	Zc3hc1	96	43.000	ENSCSEG00000009284	zc3hc1	94	43.000	Cynoglossus_semilaevis
ENSCGRG00001018805	Zc3hc1	93	45.732	ENSCVAG00000011566	zc3hc1	94	42.562	Cyprinodon_variegatus
ENSCGRG00001018805	Zc3hc1	95	46.856	ENSDARG00000062651	zc3hc1	95	46.856	Danio_rerio
ENSCGRG00001018805	Zc3hc1	100	85.060	ENSDNOG00000045016	ZC3HC1	100	85.060	Dasypus_novemcinctus
ENSCGRG00001018805	Zc3hc1	100	76.892	ENSDORG00000008697	Zc3hc1	100	76.892	Dipodomys_ordii
ENSCGRG00001018805	Zc3hc1	90	88.717	ENSEASG00005008789	ZC3HC1	97	88.717	Equus_asinus_asinus
ENSCGRG00001018805	Zc3hc1	100	86.481	ENSECAG00000017886	ZC3HC1	100	86.481	Equus_caballus
ENSCGRG00001018805	Zc3hc1	84	82.099	ENSEEUG00000003123	ZC3HC1	84	82.099	Erinaceus_europaeus
ENSCGRG00001018805	Zc3hc1	96	43.137	ENSELUG00000023168	zc3hc1	97	43.922	Esox_lucius
ENSCGRG00001018805	Zc3hc1	100	85.857	ENSFCAG00000010429	ZC3HC1	100	85.857	Felis_catus
ENSCGRG00001018805	Zc3hc1	90	57.265	ENSFALG00000005006	ZC3HC1	100	57.265	Ficedula_albicollis
ENSCGRG00001018805	Zc3hc1	100	83.466	ENSFDAG00000019897	ZC3HC1	100	83.466	Fukomys_damarensis
ENSCGRG00001018805	Zc3hc1	95	45.783	ENSFHEG00000020149	zc3hc1	99	41.667	Fundulus_heteroclitus
ENSCGRG00001018805	Zc3hc1	93	45.104	ENSGMOG00000002914	zc3hc1	95	42.620	Gadus_morhua
ENSCGRG00001018805	Zc3hc1	98	59.838	ENSGALG00000008003	ZC3HC1	99	59.838	Gallus_gallus
ENSCGRG00001018805	Zc3hc1	95	45.482	ENSGAFG00000016095	zc3hc1	96	43.232	Gambusia_affinis
ENSCGRG00001018805	Zc3hc1	93	46.828	ENSGACG00000019706	zc3hc1	94	44.856	Gasterosteus_aculeatus
ENSCGRG00001018805	Zc3hc1	77	67.519	ENSGAGG00000016106	ZC3HC1	100	67.519	Gopherus_agassizii
ENSCGRG00001018805	Zc3hc1	99	86.826	ENSGGOG00000015504	ZC3HC1	99	86.826	Gorilla_gorilla
ENSCGRG00001018805	Zc3hc1	93	45.897	ENSHBUG00000008347	zc3hc1	94	43.532	Haplochromis_burtoni
ENSCGRG00001018805	Zc3hc1	100	84.462	ENSHGLG00000005085	ZC3HC1	100	84.462	Heterocephalus_glaber_female
ENSCGRG00001018805	Zc3hc1	100	84.263	ENSHGLG00100011395	ZC3HC1	100	84.263	Heterocephalus_glaber_male
ENSCGRG00001018805	Zc3hc1	95	43.595	ENSHCOG00000014309	zc3hc1	95	43.918	Hippocampus_comes
ENSCGRG00001018805	Zc3hc1	100	86.653	ENSSTOG00000023599	-	100	86.653	Ictidomys_tridecemlineatus
ENSCGRG00001018805	Zc3hc1	93	47.095	ENSKMAG00000015315	zc3hc1	88	44.376	Kryptolebias_marmoratus
ENSCGRG00001018805	Zc3hc1	94	45.481	ENSLBEG00000017325	zc3hc1	95	43.114	Labrus_bergylta
ENSCGRG00001018805	Zc3hc1	82	55.122	ENSLACG00000013032	ZC3HC1	98	55.422	Latimeria_chalumnae
ENSCGRG00001018805	Zc3hc1	99	52.890	ENSLOCG00000015963	zc3hc1	99	50.984	Lepisosteus_oculatus
ENSCGRG00001018805	Zc3hc1	100	83.597	ENSLAFG00000001292	ZC3HC1	100	83.597	Loxodonta_africana
ENSCGRG00001018805	Zc3hc1	100	87.251	ENSMFAG00000030176	ZC3HC1	100	87.251	Macaca_fascicularis
ENSCGRG00001018805	Zc3hc1	100	86.311	ENSMMUG00000006155	ZC3HC1	100	86.311	Macaca_mulatta
ENSCGRG00001018805	Zc3hc1	100	87.450	ENSMNEG00000011833	ZC3HC1	100	88.679	Macaca_nemestrina
ENSCGRG00001018805	Zc3hc1	100	87.251	ENSMLEG00000027328	ZC3HC1	100	87.251	Mandrillus_leucophaeus
ENSCGRG00001018805	Zc3hc1	93	46.970	ENSMAMG00000010691	zc3hc1	95	43.838	Mastacembelus_armatus
ENSCGRG00001018805	Zc3hc1	93	45.593	ENSMZEG00005007142	zc3hc1	94	43.326	Maylandia_zebra
ENSCGRG00001018805	Zc3hc1	98	59.319	ENSMGAG00000002977	ZC3HC1	99	59.920	Meleagris_gallopavo
ENSCGRG00001018805	Zc3hc1	82	87.198	ENSMAUG00000017032	Zc3hc1	92	87.198	Mesocricetus_auratus
ENSCGRG00001018805	Zc3hc1	100	86.056	ENSMICG00000009167	ZC3HC1	100	86.056	Microcebus_murinus
ENSCGRG00001018805	Zc3hc1	100	93.214	ENSMOCG00000015239	Zc3hc1	100	93.214	Microtus_ochrogaster
ENSCGRG00001018805	Zc3hc1	78	51.867	ENSMMOG00000002204	zc3hc1	98	42.506	Mola_mola
ENSCGRG00001018805	Zc3hc1	100	62.308	ENSMODG00000014630	ZC3HC1	100	62.308	Monodelphis_domestica
ENSCGRG00001018805	Zc3hc1	93	44.828	ENSMALG00000014447	zc3hc1	95	43.408	Monopterus_albus
ENSCGRG00001018805	Zc3hc1	100	90.229	MGP_CAROLIEiJ_G0028183	Zc3hc1	100	90.229	Mus_caroli
ENSCGRG00001018805	Zc3hc1	100	90.852	ENSMUSG00000039130	Zc3hc1	100	90.852	Mus_musculus
ENSCGRG00001018805	Zc3hc1	100	83.433	MGP_PahariEiJ_G0021941	Zc3hc1	100	83.433	Mus_pahari
ENSCGRG00001018805	Zc3hc1	100	90.930	MGP_SPRETEiJ_G0029183	Zc3hc1	100	90.930	Mus_spretus
ENSCGRG00001018805	Zc3hc1	100	85.270	ENSMPUG00000005297	ZC3HC1	95	85.804	Mustela_putorius_furo
ENSCGRG00001018805	Zc3hc1	100	84.752	ENSMLUG00000000063	-	100	84.752	Myotis_lucifugus
ENSCGRG00001018805	Zc3hc1	66	81.191	ENSMLUG00000029228	-	99	78.134	Myotis_lucifugus
ENSCGRG00001018805	Zc3hc1	100	88.446	ENSNGAG00000019014	Zc3hc1	100	88.446	Nannospalax_galili
ENSCGRG00001018805	Zc3hc1	93	45.897	ENSNBRG00000004577	zc3hc1	94	43.416	Neolamprologus_brichardi
ENSCGRG00001018805	Zc3hc1	99	86.028	ENSNLEG00000012698	ZC3HC1	99	86.028	Nomascus_leucogenys
ENSCGRG00001018805	Zc3hc1	100	75.588	ENSMEUG00000011023	ZC3HC1	100	75.299	Notamacropus_eugenii
ENSCGRG00001018805	Zc3hc1	76	79.070	ENSOPRG00000007867	-	68	79.070	Ochotona_princeps
ENSCGRG00001018805	Zc3hc1	100	82.869	ENSODEG00000014604	ZC3HC1	100	82.869	Octodon_degus
ENSCGRG00001018805	Zc3hc1	93	46.505	ENSONIG00000011644	zc3hc1	94	43.943	Oreochromis_niloticus
ENSCGRG00001018805	Zc3hc1	90	67.457	ENSOANG00000011460	ZC3HC1	100	67.457	Ornithorhynchus_anatinus
ENSCGRG00001018805	Zc3hc1	100	83.965	ENSOCUG00000017137	ZC3HC1	100	83.168	Oryctolagus_cuniculus
ENSCGRG00001018805	Zc3hc1	94	47.147	ENSORLG00000014409	zc3hc1	94	43.354	Oryzias_latipes
ENSCGRG00001018805	Zc3hc1	94	46.847	ENSORLG00020015874	zc3hc1	94	44.196	Oryzias_latipes_hni
ENSCGRG00001018805	Zc3hc1	94	46.547	ENSORLG00015014641	zc3hc1	94	43.992	Oryzias_latipes_hsok
ENSCGRG00001018805	Zc3hc1	94	47.337	ENSOMEG00000020604	zc3hc1	95	44.040	Oryzias_melastigma
ENSCGRG00001018805	Zc3hc1	94	47.024	ENSOMEG00000000215	zc3hc1	94	45.114	Oryzias_melastigma
ENSCGRG00001018805	Zc3hc1	100	79.880	ENSOGAG00000026193	ZC3HC1	100	79.880	Otolemur_garnettii
ENSCGRG00001018805	Zc3hc1	100	86.535	ENSOARG00000004907	ZC3HC1	99	86.535	Ovis_aries
ENSCGRG00001018805	Zc3hc1	99	87.026	ENSPPAG00000043172	ZC3HC1	99	87.026	Pan_paniscus
ENSCGRG00001018805	Zc3hc1	100	86.471	ENSPPRG00000001004	ZC3HC1	100	85.060	Panthera_pardus
ENSCGRG00001018805	Zc3hc1	100	85.657	ENSPTIG00000007823	ZC3HC1	100	85.657	Panthera_tigris_altaica
ENSCGRG00001018805	Zc3hc1	99	86.627	ENSPTRG00000019685	ZC3HC1	98	87.745	Pan_troglodytes
ENSCGRG00001018805	Zc3hc1	100	86.311	ENSPANG00000014229	ZC3HC1	99	87.317	Papio_anubis
ENSCGRG00001018805	Zc3hc1	94	49.057	ENSPKIG00000007172	zc3hc1	95	46.901	Paramormyrops_kingsleyae
ENSCGRG00001018805	Zc3hc1	92	64.765	ENSPSIG00000016646	ZC3HC1	100	58.285	Pelodiscus_sinensis
ENSCGRG00001018805	Zc3hc1	94	41.866	ENSPMGG00000003548	zc3hc1	94	42.823	Periophthalmus_magnuspinnatus
ENSCGRG00001018805	Zc3hc1	100	93.413	ENSPEMG00000000514	Zc3hc1	100	93.413	Peromyscus_maniculatus_bairdii
ENSCGRG00001018805	Zc3hc1	99	73.054	ENSPCIG00000020619	ZC3HC1	100	76.093	Phascolarctos_cinereus
ENSCGRG00001018805	Zc3hc1	95	45.646	ENSPFOG00000003466	zc3hc1	96	43.347	Poecilia_formosa
ENSCGRG00001018805	Zc3hc1	95	45.345	ENSPLAG00000022211	zc3hc1	96	42.685	Poecilia_latipinna
ENSCGRG00001018805	Zc3hc1	95	45.646	ENSPMEG00000001458	zc3hc1	96	43.347	Poecilia_mexicana
ENSCGRG00001018805	Zc3hc1	95	45.646	ENSPREG00000004004	zc3hc1	96	42.715	Poecilia_reticulata
ENSCGRG00001018805	Zc3hc1	99	79.125	ENSPPYG00000017998	ZC3HC1	99	79.125	Pongo_abelii
ENSCGRG00001018805	Zc3hc1	92	81.522	ENSPCAG00000001182	ZC3HC1	100	81.522	Procavia_capensis
ENSCGRG00001018805	Zc3hc1	100	87.052	ENSPCOG00000017354	ZC3HC1	100	87.052	Propithecus_coquereli
ENSCGRG00001018805	Zc3hc1	100	80.677	ENSPVAG00000003195	ZC3HC1	100	81.673	Pteropus_vampyrus
ENSCGRG00001018805	Zc3hc1	93	45.593	ENSPNYG00000020692	zc3hc1	94	43.326	Pundamilia_nyererei
ENSCGRG00001018805	Zc3hc1	93	45.154	ENSPNAG00000020746	zc3hc1	95	44.748	Pygocentrus_nattereri
ENSCGRG00001018805	Zc3hc1	100	90.637	ENSRNOG00000010154	Zc3hc1	100	90.637	Rattus_norvegicus
ENSCGRG00001018805	Zc3hc1	90	87.638	ENSRBIG00000029409	ZC3HC1	100	87.638	Rhinopithecus_bieti
ENSCGRG00001018805	Zc3hc1	100	86.853	ENSRROG00000041831	ZC3HC1	100	86.853	Rhinopithecus_roxellana
ENSCGRG00001018805	Zc3hc1	88	84.918	ENSSBOG00000032787	ZC3HC1	99	88.293	Saimiri_boliviensis_boliviensis
ENSCGRG00001018805	Zc3hc1	92	76.774	ENSSHAG00000002529	ZC3HC1	100	76.774	Sarcophilus_harrisii
ENSCGRG00001018805	Zc3hc1	94	50.479	ENSSFOG00015003667	zc3hc1	91	49.076	Scleropages_formosus
ENSCGRG00001018805	Zc3hc1	95	43.434	ENSSMAG00000000647	zc3hc1	86	43.232	Scophthalmus_maximus
ENSCGRG00001018805	Zc3hc1	94	47.447	ENSSDUG00000004241	zc3hc1	93	45.010	Seriola_dumerili
ENSCGRG00001018805	Zc3hc1	94	47.147	ENSSLDG00000025056	zc3hc1	93	45.010	Seriola_lalandi_dorsalis
ENSCGRG00001018805	Zc3hc1	99	76.647	ENSSARG00000012013	ZC3HC1	99	76.647	Sorex_araneus
ENSCGRG00001018805	Zc3hc1	90	58.770	ENSSPUG00000000778	ZC3HC1	86	59.174	Sphenodon_punctatus
ENSCGRG00001018805	Zc3hc1	94	46.269	ENSSPAG00000020041	zc3hc1	95	44.848	Stegastes_partitus
ENSCGRG00001018805	Zc3hc1	100	86.056	ENSSSCG00000016565	ZC3HC1	100	86.118	Sus_scrofa
ENSCGRG00001018805	Zc3hc1	93	46.417	ENSTRUG00000020077	zc3hc1	95	42.387	Takifugu_rubripes
ENSCGRG00001018805	Zc3hc1	93	45.988	ENSTNIG00000007585	zc3hc1	99	42.355	Tetraodon_nigroviridis
ENSCGRG00001018805	Zc3hc1	99	76.447	ENSTBEG00000005216	ZC3HC1	99	76.447	Tupaia_belangeri
ENSCGRG00001018805	Zc3hc1	95	85.833	ENSTTRG00000008458	ZC3HC1	100	85.833	Tursiops_truncatus
ENSCGRG00001018805	Zc3hc1	100	86.853	ENSUAMG00000020249	ZC3HC1	100	86.853	Ursus_americanus
ENSCGRG00001018805	Zc3hc1	100	86.255	ENSUMAG00000009268	ZC3HC1	100	86.255	Ursus_maritimus
ENSCGRG00001018805	Zc3hc1	90	87.755	ENSVPAG00000010846	ZC3HC1	77	87.755	Vicugna_pacos
ENSCGRG00001018805	Zc3hc1	100	86.722	ENSVVUG00000012386	ZC3HC1	100	86.722	Vulpes_vulpes
ENSCGRG00001018805	Zc3hc1	95	52.463	ENSXETG00000033900	zc3hc1	96	52.463	Xenopus_tropicalis
ENSCGRG00001018805	Zc3hc1	96	42.626	ENSXCOG00000013570	zc3hc1	97	43.655	Xiphophorus_couchianus
ENSCGRG00001018805	Zc3hc1	85	48.443	ENSXMAG00000010979	zc3hc1	95	45.133	Xiphophorus_maculatus