EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00001019143 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Minus strand
Length: 5983 bases
Position: chrscaffold_0:126825817-126831799
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001019804	zf-C2H2	PF00096.26	3.1e-20	1	4
ENSCGRP00001019804	zf-C2H2	PF00096.26	3.1e-20	2	4
ENSCGRP00001019804	zf-C2H2	PF00096.26	3.1e-20	3	4
ENSCGRP00001019804	zf-C2H2	PF00096.26	3.1e-20	4	4
ENSCGRP00001019804	zf-met	PF12874.7	0.00018	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001024048	-	636	-	ENSCGRP00001019804	212 (aa)	-	-

Gene Model

Click here to download ENSCGRG00001019143's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001019143's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00001019143	-	87	42.105	ENSCGRG00001013598	Zfp865	53	42.105
ENSCGRG00001019143	-	80	55.200	ENSCGRG00001002406	Zfp39	59	55.200
ENSCGRG00001019143	-	77	51.667	ENSCGRG00001023858	Zfp560	68	51.667
ENSCGRG00001019143	-	71	43.651	ENSCGRG00001009557	Zfp319	87	43.651
ENSCGRG00001019143	-	87	47.009	ENSCGRG00001001639	Zfp882	86	47.009
ENSCGRG00001019143	-	76	54.237	ENSCGRG00001010967	Zfp1	75	54.237
ENSCGRG00001019143	-	80	52.419	ENSCGRG00001020646	Gm3854	58	52.419
ENSCGRG00001019143	-	90	56.349	ENSCGRG00001007115	-	90	56.349
ENSCGRG00001019143	-	98	75.000	ENSCGRG00001024630	-	88	75.000
ENSCGRG00001019143	-	87	46.000	ENSCGRG00001002297	-	88	46.000
ENSCGRG00001019143	-	91	50.000	ENSCGRG00001015424	-	70	50.000
ENSCGRG00001019143	-	82	40.816	ENSCGRG00001017330	Repin1	83	40.816
ENSCGRG00001019143	-	82	52.542	ENSCGRG00001012640	Zfp94	79	52.542
ENSCGRG00001019143	-	82	52.800	ENSCGRG00001013602	-	93	52.800
ENSCGRG00001019143	-	76	52.344	ENSCGRG00001004047	-	74	52.344
ENSCGRG00001019143	-	89	40.171	ENSCGRG00001010581	Prdm5	67	40.171
ENSCGRG00001019143	-	62	41.758	ENSCGRG00001013674	Snai2	50	41.758
ENSCGRG00001019143	-	76	48.276	ENSCGRG00001001429	Zfp574	60	48.276
ENSCGRG00001019143	-	80	54.815	ENSCGRG00001013367	Zfp61	62	54.815
ENSCGRG00001019143	-	58	43.333	ENSCGRG00001013279	Zfp784	71	41.975
ENSCGRG00001019143	-	80	51.639	ENSCGRG00001000576	Zfp26	75	51.639
ENSCGRG00001019143	-	84	50.382	ENSCGRG00001013561	Zfp768	52	46.497
ENSCGRG00001019143	-	96	43.023	ENSCGRG00001012398	Zfp236	55	43.023
ENSCGRG00001019143	-	84	54.032	ENSCGRG00001011966	Zfp715	64	54.032
ENSCGRG00001019143	-	88	51.773	ENSCGRG00001010752	2610008E11Rik	76	51.773
ENSCGRG00001019143	-	85	54.762	ENSCGRG00001012523	-	89	54.762
ENSCGRG00001019143	-	88	54.622	ENSCGRG00001007163	-	86	54.622
ENSCGRG00001019143	-	93	48.889	ENSCGRG00001012803	-	83	48.889
ENSCGRG00001019143	-	72	52.381	ENSCGRG00001013939	Zfp454	67	53.077
ENSCGRG00001019143	-	91	66.111	ENSCGRG00001024303	-	99	63.226
ENSCGRG00001019143	-	78	54.255	ENSCGRG00001021088	Zfp354a	69	54.255

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001019143	-	80	50.833	ENSAOCG00000013672	-	98	46.104	Amphiprion_ocellaris
ENSCGRG00001019143	-	87	48.201	ENSACLG00000008821	-	92	53.488	Astatotilapia_calliptera
ENSCGRG00001019143	-	80	53.846	ENSAMXG00000036241	-	82	53.846	Astyanax_mexicanus
ENSCGRG00001019143	-	82	50.725	ENSAMXG00000043423	-	78	50.725	Astyanax_mexicanus
ENSCGRG00001019143	-	82	50.658	ENSAMXG00000040677	-	76	50.658	Astyanax_mexicanus
ENSCGRG00001019143	-	74	49.342	ENSAMXG00000037981	-	72	49.342	Astyanax_mexicanus
ENSCGRG00001019143	-	74	52.174	ENSAMXG00000036633	-	62	52.066	Astyanax_mexicanus
ENSCGRG00001019143	-	93	57.143	ENSTSYG00000006246	-	93	57.143	Carlito_syrichta
ENSCGRG00001019143	-	93	48.889	ENSCGRG00000009742	-	83	48.889	Cricetulus_griseus_crigri
ENSCGRG00001019143	-	94	54.472	ENSCGRG00000008531	-	96	63.816	Cricetulus_griseus_crigri
ENSCGRG00001019143	-	84	46.825	ENSEBUG00000003590	-	72	44.068	Eptatretus_burgeri
ENSCGRG00001019143	-	85	43.478	ENSEBUG00000015993	-	63	43.478	Eptatretus_burgeri
ENSCGRG00001019143	-	84	44.156	ENSEBUG00000015834	-	82	44.156	Eptatretus_burgeri
ENSCGRG00001019143	-	82	46.939	ENSEBUG00000017017	-	61	46.032	Eptatretus_burgeri
ENSCGRG00001019143	-	84	43.548	ENSEBUG00000003236	-	93	43.548	Eptatretus_burgeri
ENSCGRG00001019143	-	71	49.451	ENSEBUG00000001121	-	78	49.451	Eptatretus_burgeri
ENSCGRG00001019143	-	79	44.954	ENSEBUG00000007375	-	95	44.954	Eptatretus_burgeri
ENSCGRG00001019143	-	81	50.388	ENSIPUG00000013315	-	93	50.388	Ictalurus_punctatus
ENSCGRG00001019143	-	95	70.558	ENSMAUG00000016437	-	95	76.978	Mesocricetus_auratus
ENSCGRG00001019143	-	93	48.333	ENSMAUG00000005691	-	78	53.333	Mesocricetus_auratus
ENSCGRG00001019143	-	93	46.111	ENSMOCG00000000365	-	82	44.970	Microtus_ochrogaster
ENSCGRG00001019143	-	93	47.222	MGP_CAROLIEiJ_G0018660	-	67	48.026	Mus_caroli
ENSCGRG00001019143	-	85	54.412	MGP_CAROLIEiJ_G0018683	Zfp493	88	54.412	Mus_caroli
ENSCGRG00001019143	-	93	51.111	ENSMUSG00000074824	Rslcan18	70	51.111	Mus_musculus
ENSCGRG00001019143	-	85	60.504	ENSMUSG00000091474	2610021A01Rik	56	60.504	Mus_musculus
ENSCGRG00001019143	-	84	60.000	MGP_PahariEiJ_G0012839	-	58	60.000	Mus_pahari
ENSCGRG00001019143	-	93	47.778	MGP_SPRETEiJ_G0019543	-	69	48.026	Mus_spretus
ENSCGRG00001019143	-	61	49.138	ENSPMAG00000000404	-	98	49.138	Petromyzon_marinus
ENSCGRG00001019143	-	82	54.918	ENSPNAG00000014492	-	99	54.918	Pygocentrus_nattereri
ENSCGRG00001019143	-	79	55.639	ENSPNAG00000003017	-	83	55.639	Pygocentrus_nattereri
ENSCGRG00001019143	-	98	53.947	ENSSSCG00000040389	-	91	55.469	Sus_scrofa
ENSCGRG00001019143	-	89	40.541	ENSTRUG00000014476	-	90	40.541	Takifugu_rubripes