EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00001019426 (Gene tree)
Gene ID: -
Gene Symbol: Rab42
Alias: 9530096D07Rik|Rab42-ps
Full Name: RAB42%2C member RAS oncogene family
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Plus strand
Length: 1915 bases
Position: chrscaffold_2:21058977-21060891
Accession: 2441753
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001020194	MMR_HSR1	PF01926.23	3.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001024438	-	1316	-	ENSCGRP00001020194	216 (aa)	-	-

Gene Model

Click here to download ENSCGRG00001019426's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001019426's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00001019426	Rab42	87	40.212	ENSCGRG00001020076	Rab2a	98	38.967
ENSCGRG00001019426	Rab42	96	39.437	ENSCGRG00001020833	-	96	39.437
ENSCGRG00001019426	Rab42	83	36.702	ENSCGRG00001013041	Rab6b	88	36.702
ENSCGRG00001019426	Rab42	91	39.086	ENSCGRG00001006440	Rab14	88	39.086
ENSCGRG00001019426	Rab42	79	36.628	ENSCGRG00001008994	Rab23	70	36.628
ENSCGRG00001019426	Rab42	83	38.830	ENSCGRG00001023636	Rab35	92	38.830
ENSCGRG00001019426	Rab42	79	30.460	ENSCGRG00001015715	Rab36	64	30.460
ENSCGRG00001019426	Rab42	90	33.673	ENSCGRG00001014226	Rab5c	88	33.673
ENSCGRG00001019426	Rab42	78	36.686	ENSCGRG00001006853	Rab15	77	36.686
ENSCGRG00001019426	Rab42	77	35.465	ENSCGRG00001021807	Rab7	81	35.465
ENSCGRG00001019426	Rab42	63	35.036	ENSCGRG00001006529	-	87	32.143
ENSCGRG00001019426	Rab42	80	40.571	ENSCGRG00001021505	Rab13	83	40.571
ENSCGRG00001019426	Rab42	74	36.250	ENSCGRG00001000428	Rab5b	72	36.250
ENSCGRG00001019426	Rab42	82	36.957	ENSCGRG00001001220	Rab9b	90	36.957
ENSCGRG00001019426	Rab42	77	39.521	ENSCGRG00001018153	Rab6a	78	39.521
ENSCGRG00001019426	Rab42	78	40.237	ENSCGRG00001017341	Rab25	77	40.237
ENSCGRG00001019426	Rab42	81	42.286	ENSCGRG00001014956	Rab1b	85	42.286
ENSCGRG00001019426	Rab42	69	34.437	ENSCGRG00001021366	Rheb	79	34.437
ENSCGRG00001019426	Rab42	81	37.853	ENSCGRG00001013827	Rab11b	79	37.853
ENSCGRG00001019426	Rab42	83	39.560	ENSCGRG00001021787	Rab30	87	39.560
ENSCGRG00001019426	Rab42	78	30.952	ENSCGRG00001013183	-	86	30.952
ENSCGRG00001019426	Rab42	77	34.132	ENSCGRG00001020667	Rab22a	84	34.132
ENSCGRG00001019426	Rab42	80	35.057	ENSCGRG00001006958	Rab12	57	35.260
ENSCGRG00001019426	Rab42	93	35.294	ENSCGRG00001010235	Rab9	98	35.294
ENSCGRG00001019426	Rab42	81	42.857	ENSCGRG00001012691	-	83	42.857
ENSCGRG00001019426	Rab42	80	39.080	ENSCGRG00001023313	Rab11a	78	39.080
ENSCGRG00001019426	Rab42	74	37.500	ENSCGRG00001020018	-	72	37.500
ENSCGRG00001019426	Rab42	75	34.783	ENSCGRG00001020093	Nras	97	32.292
ENSCGRG00001019426	Rab42	87	36.170	ENSCGRG00001017519	Rab18	88	36.170
ENSCGRG00001019426	Rab42	63	34.307	ENSCGRG00001018735	Hras	86	31.548
ENSCGRG00001019426	Rab42	86	49.198	ENSCGRG00001022502	Rab39b	86	49.198
ENSCGRG00001019426	Rab42	69	39.073	ENSCGRG00001001211	Rab33a	62	39.073
ENSCGRG00001019426	Rab42	80	38.798	ENSCGRG00001016897	Rab33b	78	38.798

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001019426	Rab42	100	78.341	ENSANAG00000035487	-	100	78.341	Aotus_nancymaae
ENSCGRG00001019426	Rab42	100	73.303	ENSBTAG00000021525	-	100	73.303	Bos_taurus
ENSCGRG00001019426	Rab42	99	61.860	ENSCPBG00000011245	RAB42	99	62.500	Chrysemys_picta_bellii
ENSCGRG00001019426	Rab42	100	78.802	ENSDORG00000023607	Rab42	100	78.802	Dipodomys_ordii
ENSCGRG00001019426	Rab42	100	77.626	ENSFCAG00000037124	-	100	78.082	Felis_catus
ENSCGRG00001019426	Rab42	98	62.441	ENSGAGG00000004921	RAB42	100	61.215	Gopherus_agassizii
ENSCGRG00001019426	Rab42	100	78.440	ENSSTOG00000000084	-	100	78.440	Ictidomys_tridecemlineatus
ENSCGRG00001019426	Rab42	100	96.296	ENSMAUG00000020223	Rab42	100	96.296	Mesocricetus_auratus
ENSCGRG00001019426	Rab42	100	78.539	ENSMICG00000029915	-	100	78.539	Microcebus_murinus
ENSCGRG00001019426	Rab42	100	92.130	ENSMOCG00000021639	Rab42	100	92.130	Microtus_ochrogaster
ENSCGRG00001019426	Rab42	99	64.815	ENSMODG00000023873	-	98	64.815	Monodelphis_domestica
ENSCGRG00001019426	Rab42	100	83.028	ENSNGAG00000015676	Rab42	100	83.028	Nannospalax_galili
ENSCGRG00001019426	Rab42	100	78.082	ENSOGAG00000006951	-	100	78.082	Otolemur_garnettii
ENSCGRG00001019426	Rab42	97	61.905	ENSPSIG00000006831	RAB42	92	61.905	Pelodiscus_sinensis
ENSCGRG00001019426	Rab42	100	78.995	ENSPCOG00000008605	-	100	78.995	Propithecus_coquereli
ENSCGRG00001019426	Rab42	96	73.684	ENSSARG00000007565	-	100	73.684	Sorex_araneus
ENSCGRG00001019426	Rab42	98	60.563	ENSSPUG00000010337	RAB42	98	60.563	Sphenodon_punctatus
ENSCGRG00001019426	Rab42	100	76.471	ENSSSCG00000030432	-	100	76.471	Sus_scrofa