EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCGRG00001019461 (Gene tree)
Gene ID: -
Gene Symbol: Bms1
Alias: Bms1l
Full Name: BMS1%2C ribosome biogenesis factor
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Minus strand
Length: 39576 bases
Position: chrscaffold_24:27435372-27474947
Accession: 100770546
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001020260	AARP2CN	PF08142.12	4.1e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001024504	-	4735	XM_003504269	ENSCGRP00001020260	1276 (aa)	XP_003504317	G3HKS8

Gene Model

Click here to download ENSCGRG00001019461's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001019461's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001019461	Bms1	99	86.381	ENSG00000165733	BMS1	99	87.626	Homo_sapiens
ENSCGRG00001019461	Bms1	71	71.280	ENSAPOG00000002296	bms1	99	59.457	Acanthochromis_polyacanthus
ENSCGRG00001019461	Bms1	99	84.598	ENSAMEG00000016834	BMS1	99	84.907	Ailuropoda_melanoleuca
ENSCGRG00001019461	Bms1	77	79.837	ENSACIG00000002588	bms1	90	78.295	Amphilophus_citrinellus
ENSCGRG00001019461	Bms1	86	69.262	ENSAOCG00000018088	bms1	99	62.559	Amphiprion_ocellaris
ENSCGRG00001019461	Bms1	84	70.259	ENSAPEG00000014673	bms1	99	62.383	Amphiprion_percula
ENSCGRG00001019461	Bms1	90	68.102	ENSATEG00000023465	bms1	98	62.326	Anabas_testudineus
ENSCGRG00001019461	Bms1	96	71.326	ENSAPLG00000003759	BMS1	99	72.372	Anas_platyrhynchos
ENSCGRG00001019461	Bms1	99	69.639	ENSACAG00000004537	-	99	69.901	Anolis_carolinensis
ENSCGRG00001019461	Bms1	99	85.837	ENSANAG00000023432	BMS1	99	86.381	Aotus_nancymaae
ENSCGRG00001019461	Bms1	93	67.188	ENSACLG00000001294	bms1	98	62.696	Astatotilapia_calliptera
ENSCGRG00001019461	Bms1	99	85.392	ENSBTAG00000012878	BMS1	99	85.392	Bos_taurus
ENSCGRG00001019461	Bms1	80	52.174	WBGene00022021	Y61A9LA.10	98	52.542	Caenorhabditis_elegans
ENSCGRG00001019461	Bms1	99	86.304	ENSCJAG00000021705	BMS1	99	87.004	Callithrix_jacchus
ENSCGRG00001019461	Bms1	99	85.082	ENSCAFG00000007114	BMS1	99	85.315	Canis_familiaris
ENSCGRG00001019461	Bms1	99	85.082	ENSCAFG00020025282	BMS1	99	85.315	Canis_lupus_dingo
ENSCGRG00001019461	Bms1	99	85.303	ENSCHIG00000023251	BMS1	99	85.303	Capra_hircus
ENSCGRG00001019461	Bms1	100	79.396	ENSCAPG00000008652	BMS1	100	79.549	Cavia_aperea
ENSCGRG00001019461	Bms1	100	83.127	ENSCPOG00000000502	BMS1	100	83.294	Cavia_porcellus
ENSCGRG00001019461	Bms1	99	70.918	ENSCCAG00000024969	-	99	72.084	Cebus_capucinus
ENSCGRG00001019461	Bms1	99	85.914	ENSCATG00000030625	-	99	86.148	Cercocebus_atys
ENSCGRG00001019461	Bms1	90	65.388	ENSCATG00000008695	-	96	65.849	Cercocebus_atys
ENSCGRG00001019461	Bms1	100	83.166	ENSCLAG00000002446	BMS1	100	83.683	Chinchilla_lanigera
ENSCGRG00001019461	Bms1	99	86.537	ENSCSAG00000011118	BMS1	99	86.625	Chlorocebus_sabaeus
ENSCGRG00001019461	Bms1	99	83.501	ENSCHOG00000011055	BMS1	99	83.501	Choloepus_hoffmanni
ENSCGRG00001019461	Bms1	99	72.345	ENSCPBG00000025581	BMS1	99	72.574	Chrysemys_picta_bellii
ENSCGRG00001019461	Bms1	79	58.354	ENSCING00000003181	-	98	58.621	Ciona_intestinalis
ENSCGRG00001019461	Bms1	68	53.735	ENSCSAVG00000004113	-	88	53.505	Ciona_savignyi
ENSCGRG00001019461	Bms1	99	86.848	ENSCANG00000011609	BMS1	99	86.770	Colobus_angolensis_palliatus
ENSCGRG00001019461	Bms1	100	100.000	ENSCGRG00000009016	Bms1	99	100.000	Cricetulus_griseus_crigri
ENSCGRG00001019461	Bms1	82	74.118	ENSCSEG00000002469	bms1	59	60.027	Cynoglossus_semilaevis
ENSCGRG00001019461	Bms1	80	75.362	ENSCVAG00000008371	bms1	98	62.783	Cyprinodon_variegatus
ENSCGRG00001019461	Bms1	89	66.297	ENSDARG00000054154	bms1	98	61.797	Danio_rerio
ENSCGRG00001019461	Bms1	99	84.348	ENSDNOG00000015761	BMS1	99	84.961	Dasypus_novemcinctus
ENSCGRG00001019461	Bms1	100	85.171	ENSDORG00000002982	Bms1	99	85.714	Dipodomys_ordii
ENSCGRG00001019461	Bms1	78	58.374	FBgn0036686	CG7728	97	59.352	Drosophila_melanogaster
ENSCGRG00001019461	Bms1	86	83.036	ENSETEG00000009554	BMS1	91	83.036	Echinops_telfairi
ENSCGRG00001019461	Bms1	99	85.948	ENSEASG00005006894	BMS1	99	86.339	Equus_asinus_asinus
ENSCGRG00001019461	Bms1	99	85.792	ENSECAG00000001358	BMS1	99	86.183	Equus_caballus
ENSCGRG00001019461	Bms1	92	65.595	ENSELUG00000001756	bms1	98	66.473	Esox_lucius
ENSCGRG00001019461	Bms1	99	86.247	ENSFCAG00000011220	BMS1	99	86.247	Felis_catus
ENSCGRG00001019461	Bms1	99	70.830	ENSFALG00000006882	BMS1	99	71.211	Ficedula_albicollis
ENSCGRG00001019461	Bms1	100	82.879	ENSFDAG00000001422	BMS1	100	82.568	Fukomys_damarensis
ENSCGRG00001019461	Bms1	87	68.930	ENSFHEG00000003367	bms1	98	62.598	Fundulus_heteroclitus
ENSCGRG00001019461	Bms1	97	61.314	ENSGMOG00000000718	bms1	91	75.253	Gadus_morhua
ENSCGRG00001019461	Bms1	99	71.012	ENSGALG00000002624	BMS1	99	71.079	Gallus_gallus
ENSCGRG00001019461	Bms1	91	64.218	ENSGACG00000015334	bms1	88	65.605	Gasterosteus_aculeatus
ENSCGRG00001019461	Bms1	99	73.433	ENSGAGG00000003467	BMS1	99	72.317	Gopherus_agassizii
ENSCGRG00001019461	Bms1	93	67.515	ENSHBUG00000022628	bms1	98	62.696	Haplochromis_burtoni
ENSCGRG00001019461	Bms1	100	82.815	ENSHGLG00000000477	BMS1	99	82.316	Heterocephalus_glaber_female
ENSCGRG00001019461	Bms1	100	82.893	ENSHGLG00100002176	BMS1	99	82.394	Heterocephalus_glaber_male
ENSCGRG00001019461	Bms1	99	61.111	ENSHCOG00000017604	bms1	99	60.938	Hippocampus_comes
ENSCGRG00001019461	Bms1	97	71.622	ENSIPUG00000017855	bms1	99	61.239	Ictalurus_punctatus
ENSCGRG00001019461	Bms1	100	86.568	ENSSTOG00000015063	BMS1	99	86.459	Ictidomys_tridecemlineatus
ENSCGRG00001019461	Bms1	100	86.215	ENSJJAG00000017328	Bms1	100	86.059	Jaculus_jaculus
ENSCGRG00001019461	Bms1	57	66.920	ENSKMAG00000021982	bms1	95	66.998	Kryptolebias_marmoratus
ENSCGRG00001019461	Bms1	82	71.526	ENSLBEG00000028208	bms1	98	61.042	Labrus_bergylta
ENSCGRG00001019461	Bms1	99	60.786	ENSLACG00000001600	BMS1	100	61.521	Latimeria_chalumnae
ENSCGRG00001019461	Bms1	84	75.056	ENSLOCG00000012914	bms1	99	64.097	Lepisosteus_oculatus
ENSCGRG00001019461	Bms1	99	83.217	ENSLAFG00000006250	BMS1	99	83.605	Loxodonta_africana
ENSCGRG00001019461	Bms1	84	88.148	ENSMFAG00000037771	BMS1	99	89.074	Macaca_fascicularis
ENSCGRG00001019461	Bms1	90	73.288	ENSMMUG00000007426	-	98	73.643	Macaca_mulatta
ENSCGRG00001019461	Bms1	85	67.887	ENSMLEG00000029084	-	97	68.871	Mandrillus_leucophaeus
ENSCGRG00001019461	Bms1	99	58.869	ENSMAMG00000020855	bms1	91	72.494	Mastacembelus_armatus
ENSCGRG00001019461	Bms1	93	66.992	ENSMZEG00005005663	bms1	98	62.618	Maylandia_zebra
ENSCGRG00001019461	Bms1	95	70.823	ENSMGAG00000001170	BMS1	99	70.820	Meleagris_gallopavo
ENSCGRG00001019461	Bms1	100	95.846	ENSMAUG00000002195	Bms1	100	95.846	Mesocricetus_auratus
ENSCGRG00001019461	Bms1	99	85.159	ENSMICG00000009977	BMS1	99	85.548	Microcebus_murinus
ENSCGRG00001019461	Bms1	100	91.524	ENSMOCG00000002038	Bms1	99	91.524	Microtus_ochrogaster
ENSCGRG00001019461	Bms1	86	68.465	ENSMMOG00000000977	bms1	98	66.135	Mola_mola
ENSCGRG00001019461	Bms1	100	76.376	ENSMODG00000001177	BMS1	99	77.220	Monodelphis_domestica
ENSCGRG00001019461	Bms1	99	60.951	ENSMALG00000009680	bms1	98	60.955	Monopterus_albus
ENSCGRG00001019461	Bms1	71	97.816	MGP_CAROLIEiJ_G0028785	-	84	97.995	Mus_caroli
ENSCGRG00001019461	Bms1	100	90.839	ENSMUSG00000030138	Bms1	100	91.071	Mus_musculus
ENSCGRG00001019461	Bms1	100	91.064	MGP_PahariEiJ_G0022539	Bms1	100	91.220	Mus_pahari
ENSCGRG00001019461	Bms1	99	90.598	MGP_SPRETEiJ_G0029816	Bms1	99	90.831	Mus_spretus
ENSCGRG00001019461	Bms1	99	85.703	ENSMPUG00000017276	BMS1	99	86.092	Mustela_putorius_furo
ENSCGRG00001019461	Bms1	99	85.082	ENSMLUG00000003260	BMS1	99	85.082	Myotis_lucifugus
ENSCGRG00001019461	Bms1	99	76.609	ENSNGAG00000015258	Bms1	95	88.388	Nannospalax_galili
ENSCGRG00001019461	Bms1	99	84.514	ENSNLEG00000015791	BMS1	99	85.525	Nomascus_leucogenys
ENSCGRG00001019461	Bms1	81	94.524	ENSOPRG00000005195	BMS1	81	94.524	Ochotona_princeps
ENSCGRG00001019461	Bms1	100	82.944	ENSODEG00000005554	BMS1	100	82.788	Octodon_degus
ENSCGRG00001019461	Bms1	91	67.778	ENSONIG00000007227	bms1	98	62.539	Oreochromis_niloticus
ENSCGRG00001019461	Bms1	99	75.078	ENSOANG00000000662	-	99	75.451	Ornithorhynchus_anatinus
ENSCGRG00001019461	Bms1	99	84.981	ENSOCUG00000005354	BMS1	99	84.903	Oryctolagus_cuniculus
ENSCGRG00001019461	Bms1	88	67.057	ENSORLG00000014655	bms1	98	62.411	Oryzias_latipes
ENSCGRG00001019461	Bms1	89	67.520	ENSORLG00020016246	bms1	98	61.837	Oryzias_latipes_hni
ENSCGRG00001019461	Bms1	89	67.360	ENSORLG00015014183	bms1	98	62.638	Oryzias_latipes_hsok
ENSCGRG00001019461	Bms1	88	68.921	ENSOMEG00000015042	bms1	98	63.320	Oryzias_melastigma
ENSCGRG00001019461	Bms1	99	85.980	ENSOGAG00000006511	BMS1	99	86.367	Otolemur_garnettii
ENSCGRG00001019461	Bms1	99	85.271	ENSOARG00000003900	BMS1	99	85.271	Ovis_aries
ENSCGRG00001019461	Bms1	99	83.126	ENSPPAG00000027837	BMS1	99	83.916	Pan_paniscus
ENSCGRG00001019461	Bms1	99	86.402	ENSPPRG00000001311	BMS1	99	86.325	Panthera_pardus
ENSCGRG00001019461	Bms1	99	84.460	ENSPTIG00000009652	BMS1	99	84.382	Panthera_tigris_altaica
ENSCGRG00001019461	Bms1	99	86.392	ENSPTRG00000002441	BMS1	99	87.471	Pan_troglodytes
ENSCGRG00001019461	Bms1	99	71.648	ENSPSIG00000006481	BMS1	99	72.197	Pelodiscus_sinensis
ENSCGRG00001019461	Bms1	100	85.093	ENSPEMG00000022467	Bms1	100	85.559	Peromyscus_maniculatus_bairdii
ENSCGRG00001019461	Bms1	95	90.604	ENSPCIG00000001339	BMS1	98	85.915	Phascolarctos_cinereus
ENSCGRG00001019461	Bms1	86	65.974	ENSPFOG00000015180	bms1	99	59.582	Poecilia_formosa
ENSCGRG00001019461	Bms1	86	67.423	ENSPMEG00000023176	bms1	93	61.313	Poecilia_mexicana
ENSCGRG00001019461	Bms1	86	67.152	ENSPREG00000002695	bms1	98	60.832	Poecilia_reticulata
ENSCGRG00001019461	Bms1	60	83.887	ENSPPYG00000002836	-	99	84.783	Pongo_abelii
ENSCGRG00001019461	Bms1	74	93.878	ENSPCAG00000014528	BMS1	73	93.878	Procavia_capensis
ENSCGRG00001019461	Bms1	95	81.305	ENSPCOG00000023834	-	99	82.244	Propithecus_coquereli
ENSCGRG00001019461	Bms1	99	83.489	ENSPVAG00000000725	BMS1	99	83.969	Pteropus_vampyrus
ENSCGRG00001019461	Bms1	88	67.955	ENSPNYG00000018866	bms1	98	61.772	Pundamilia_nyererei
ENSCGRG00001019461	Bms1	82	89.459	ENSRNOG00000006576	Bms1	100	89.839	Rattus_norvegicus
ENSCGRG00001019461	Bms1	99	83.969	ENSRROG00000040101	BMS1	99	84.825	Rhinopithecus_roxellana
ENSCGRG00001019461	Bms1	71	48.230	YPL217C	-	79	48.826	Saccharomyces_cerevisiae
ENSCGRG00001019461	Bms1	99	86.848	ENSSBOG00000035778	BMS1	99	87.549	Saimiri_boliviensis_boliviensis
ENSCGRG00001019461	Bms1	100	76.300	ENSSHAG00000005062	BMS1	99	76.525	Sarcophilus_harrisii
ENSCGRG00001019461	Bms1	99	60.771	ENSSFOG00015022313	bms1	99	61.747	Scleropages_formosus
ENSCGRG00001019461	Bms1	90	66.506	ENSSMAG00000019966	bms1	98	61.455	Scophthalmus_maximus
ENSCGRG00001019461	Bms1	90	67.363	ENSSDUG00000016875	bms1	98	61.107	Seriola_dumerili
ENSCGRG00001019461	Bms1	90	68.226	ENSSLDG00000015199	bms1	98	61.295	Seriola_lalandi_dorsalis
ENSCGRG00001019461	Bms1	70	73.415	ENSSARG00000014407	BMS1	100	73.971	Sorex_araneus
ENSCGRG00001019461	Bms1	100	71.624	ENSSPUG00000014454	BMS1	99	72.222	Sphenodon_punctatus
ENSCGRG00001019461	Bms1	99	86.547	ENSSSCG00000010198	BMS1	99	86.625	Sus_scrofa
ENSCGRG00001019461	Bms1	99	70.719	ENSTGUG00000006302	-	99	72.116	Taeniopygia_guttata
ENSCGRG00001019461	Bms1	88	63.968	ENSTRUG00000008028	bms1	98	64.343	Takifugu_rubripes
ENSCGRG00001019461	Bms1	99	58.933	ENSTNIG00000006216	bms1	88	65.120	Tetraodon_nigroviridis
ENSCGRG00001019461	Bms1	61	89.865	ENSTBEG00000001673	-	64	89.764	Tupaia_belangeri
ENSCGRG00001019461	Bms1	99	82.970	ENSTTRG00000007983	BMS1	99	82.970	Tursiops_truncatus
ENSCGRG00001019461	Bms1	99	85.703	ENSUAMG00000023996	BMS1	99	86.169	Ursus_americanus
ENSCGRG00001019461	Bms1	99	85.548	ENSUMAG00000016523	BMS1	99	86.014	Ursus_maritimus
ENSCGRG00001019461	Bms1	88	80.210	ENSVPAG00000007477	BMS1	99	80.648	Vicugna_pacos
ENSCGRG00001019461	Bms1	99	85.082	ENSVVUG00000021305	BMS1	99	85.392	Vulpes_vulpes
ENSCGRG00001019461	Bms1	98	64.818	ENSXETG00000008158	bms1	99	65.757	Xenopus_tropicalis
ENSCGRG00001019461	Bms1	86	66.805	ENSXCOG00000000506	bms1	93	76.263	Xiphophorus_couchianus
ENSCGRG00001019461	Bms1	87	66.258	ENSXMAG00000014236	bms1	98	60.642	Xiphophorus_maculatus