EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCGRG00001019696 (Gene tree)
Gene ID
-
Gene Symbol
Pabpn1
Alias
Pabp3|poly(A) binding protein II
Full Name
poly(A) binding protein%2C nuclear 1
Gene Type
protein_coding
Species
Cricetulus_griseus_chok1gshd
Status
putative
Strand
Plus strand
Length
17159 bases
Position
chrscaffold_10:1214108-1231266
Accession
1859158
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCGRP00001020597RRM_1PF00076.222.6e-1511
ENSCGRP00001020602RRM_1PF00076.227.4e-1511
ENSCGRP00001020605RRM_1PF00076.228.3e-1511
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCGRT00001024849-960-ENSCGRP00001020605319 (aa)--
ENSCGRT00001024846-909-ENSCGRP00001020602302 (aa)-UPI00042AD282
ENSCGRT00001024841-2773-ENSCGRP00001020597178 (aa)--
Gene Model
Click here to download ENSCGRG00001019696's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001019696's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCGRG00001019696Pabpn18056.849ENSCGRG00001013211Pabpn1l5156.849
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCGRG00001019696Pabpn110099.438ENSG00000258643BCL2L2-PABPN15799.471Homo_sapiens
ENSCGRG00001019696Pabpn110099.438ENSG00000100836PABPN110099.438Homo_sapiens
ENSCGRG00001019696Pabpn19480.952ENSAPOG00000016425pabpn18681.553Acanthochromis_polyacanthus
ENSCGRG00001019696Pabpn110099.438ENSAMEG00000007048BCL2L2-PABPN110099.471Ailuropoda_melanoleuca
ENSCGRG00001019696Pabpn19481.548ENSACIG00000021744pabpn19481.548Amphilophus_citrinellus
ENSCGRG00001019696Pabpn19480.952ENSAOCG00000015805pabpn18681.553Amphiprion_ocellaris
ENSCGRG00001019696Pabpn19480.952ENSAPEG00000009623pabpn18681.553Amphiprion_percula
ENSCGRG00001019696Pabpn19481.548ENSATEG00000020531pabpn18682.039Anabas_testudineus
ENSCGRG00001019696Pabpn19492.262ENSACAG00000006185-7487.560Anolis_carolinensis
ENSCGRG00001019696Pabpn110099.438ENSANAG00000024513-10090.066Aotus_nancymaae
ENSCGRG00001019696Pabpn18980.503ENSACLG00000016374pabpn16680.402Astatotilapia_calliptera
ENSCGRG00001019696Pabpn19483.333ENSAMXG00000000452pabpn19483.333Astyanax_mexicanus
ENSCGRG00001019696Pabpn110097.753ENSBTAG00000053753-7197.906Bos_taurus
ENSCGRG00001019696Pabpn110099.438ENSBTAG00000006884PABPN110096.732Bos_taurus
ENSCGRG00001019696Pabpn18194.483ENSBTAG00000050594-8977.256Bos_taurus
ENSCGRG00001019696Pabpn17462.879WBGene00003904pabp-29153.886Caenorhabditis_elegans
ENSCGRG00001019696Pabpn110099.438ENSCJAG00000007960-10097.386Callithrix_jacchus
ENSCGRG00001019696Pabpn110097.753ENSCJAG00000004407-8997.753Callithrix_jacchus
ENSCGRG00001019696Pabpn110099.438ENSCAFG00000011482PABPN110094.444Canis_familiaris
ENSCGRG00001019696Pabpn110099.438ENSCAFG00020006651-10097.386Canis_lupus_dingo
ENSCGRG00001019696Pabpn110099.438ENSCAFG00020007298-10097.386Canis_lupus_dingo
ENSCGRG00001019696Pabpn110099.438ENSCHIG00000012184PABPN110097.059Capra_hircus
ENSCGRG00001019696Pabpn110099.438ENSTSYG00000033996BCL2L2-PABPN110099.438Carlito_syrichta
ENSCGRG00001019696Pabpn17898.551ENSCAPG00000009461-9998.551Cavia_aperea
ENSCGRG00001019696Pabpn110098.876ENSCPOG00000025574PABPN110096.732Cavia_porcellus
ENSCGRG00001019696Pabpn110099.438ENSCCAG00000033954BCL2L2-PABPN110097.386Cebus_capucinus
ENSCGRG00001019696Pabpn110099.438ENSCATG00000038536BCL2L2-PABPN110097.386Cercocebus_atys
ENSCGRG00001019696Pabpn18597.368ENSCLAG00000012423PABPN19180.071Chinchilla_lanigera
ENSCGRG00001019696Pabpn110098.315ENSCSAG00000016036PABPN110096.078Chlorocebus_sabaeus
ENSCGRG00001019696Pabpn19490.419ENSCHOG00000004798BCL2L2-PABPN18788.060Choloepus_hoffmanni
ENSCGRG00001019696Pabpn19493.413ENSCPBG00000026060-9493.413Chrysemys_picta_bellii
ENSCGRG00001019696Pabpn110061.798ENSCING00000012468-8464.677Ciona_intestinalis
ENSCGRG00001019696Pabpn110060.112ENSCSAVG00000002001-9361.677Ciona_savignyi
ENSCGRG00001019696Pabpn19486.826ENSCANG00000030980-9478.339Colobus_angolensis_palliatus
ENSCGRG00001019696Pabpn110099.438ENSCANG00000009750BCL2L2-PABPN110099.438Colobus_angolensis_palliatus
ENSCGRG00001019696Pabpn1100100.000ENSCGRG00000011102Pabpn1100100.000Cricetulus_griseus_crigri
ENSCGRG00001019696Pabpn19480.952ENSCSEG00000008774pabpn18980.000Cynoglossus_semilaevis
ENSCGRG00001019696Pabpn19477.381ENSCVAG00000003152pabpn18680.583Cyprinodon_variegatus
ENSCGRG00001019696Pabpn19482.738ENSDARG00000045373pabpn18683.010Danio_rerio
ENSCGRG00001019696Pabpn16865.289ENSDARG00000087996pabpn1l7266.387Danio_rerio
ENSCGRG00001019696Pabpn110099.438ENSDNOG00000023682PABPN110097.386Dasypus_novemcinctus
ENSCGRG00001019696Pabpn17590.977ENSDORG00000023928-8590.984Dipodomys_ordii
ENSCGRG00001019696Pabpn110098.315ENSDORG00000028966-10097.059Dipodomys_ordii
ENSCGRG00001019696Pabpn110061.798FBgn0005648Pabp28263.874Drosophila_melanogaster
ENSCGRG00001019696Pabpn110078.212ENSEBUG00000002322pabpn18379.381Eptatretus_burgeri
ENSCGRG00001019696Pabpn110099.438ENSEASG00005011716PABPN110097.386Equus_asinus_asinus
ENSCGRG00001019696Pabpn19998.864ENSECAG00000011652PABPN19997.279Equus_caballus
ENSCGRG00001019696Pabpn19492.814ENSEEUG00000012973-7293.365Erinaceus_europaeus
ENSCGRG00001019696Pabpn19485.119ENSELUG00000022654pabpn18584.951Esox_lucius
ENSCGRG00001019696Pabpn110099.438ENSFCAG00000031922PABPN110097.386Felis_catus
ENSCGRG00001019696Pabpn110098.315ENSFDAG00000018381BCL2L2-PABPN110098.315Fukomys_damarensis
ENSCGRG00001019696Pabpn19475.000ENSFHEG00000007215pabpn18679.612Fundulus_heteroclitus
ENSCGRG00001019696Pabpn18782.692ENSGMOG00000003922pabpn16682.990Gadus_morhua
ENSCGRG00001019696Pabpn19488.757ENSGALG00000052930-6090.291Gallus_gallus
ENSCGRG00001019696Pabpn19481.065ENSGAFG00000017099pabpn18681.643Gambusia_affinis
ENSCGRG00001019696Pabpn19476.667ENSGACG00000002167pabpn19076.126Gasterosteus_aculeatus
ENSCGRG00001019696Pabpn110099.438ENSGGOG00000022683-10097.386Gorilla_gorilla
ENSCGRG00001019696Pabpn19482.036ENSGGOG00000039675-7681.463Gorilla_gorilla
ENSCGRG00001019696Pabpn19485.030ENSGGOG00000025919-9883.784Gorilla_gorilla
ENSCGRG00001019696Pabpn19481.548ENSHBUG00000019523pabpn18682.039Haplochromis_burtoni
ENSCGRG00001019696Pabpn19379.518ENSHGLG00000018588-7180.952Heterocephalus_glaber_female
ENSCGRG00001019696Pabpn19476.048ENSHGLG00000009842-9376.048Heterocephalus_glaber_female
ENSCGRG00001019696Pabpn110098.876ENSHGLG00000002927-10096.732Heterocephalus_glaber_female
ENSCGRG00001019696Pabpn19488.304ENSHGLG00100018935-9488.304Heterocephalus_glaber_male
ENSCGRG00001019696Pabpn19379.518ENSHGLG00100015565-7280.952Heterocephalus_glaber_male
ENSCGRG00001019696Pabpn110098.876ENSHGLG00100006673-10098.876Heterocephalus_glaber_male
ENSCGRG00001019696Pabpn19476.647ENSHCOG00000004655pabpn18681.553Hippocampus_comes
ENSCGRG00001019696Pabpn19482.143ENSIPUG00000008085PABPN18682.524Ictalurus_punctatus
ENSCGRG00001019696Pabpn19479.167ENSIPUG00000000180-8680.808Ictalurus_punctatus
ENSCGRG00001019696Pabpn110099.438ENSSTOG00000029847BCL2L2-PABPN110099.438Ictidomys_tridecemlineatus
ENSCGRG00001019696Pabpn110099.438ENSJJAG00000023507Gm2052110099.438Jaculus_jaculus
ENSCGRG00001019696Pabpn19480.473ENSKMAG00000018748pabpn18681.159Kryptolebias_marmoratus
ENSCGRG00001019696Pabpn19481.548ENSLBEG00000027266pabpn18682.039Labrus_bergylta
ENSCGRG00001019696Pabpn18785.256ENSLACG00000000646pabpn18384.817Latimeria_chalumnae
ENSCGRG00001019696Pabpn110065.363ENSLOCG00000004694pabpn1l9565.217Lepisosteus_oculatus
ENSCGRG00001019696Pabpn18783.333ENSLOCG00000000796pabpn16983.505Lepisosteus_oculatus
ENSCGRG00001019696Pabpn18598.675ENSLAFG00000031227-10098.675Loxodonta_africana
ENSCGRG00001019696Pabpn110099.438ENSMFAG00000032183BCL2L2-PABPN110099.438Macaca_fascicularis
ENSCGRG00001019696Pabpn17992.908ENSMFAG00000031355-9992.908Macaca_fascicularis
ENSCGRG00001019696Pabpn18489.933ENSMMUG00000048382-9574.648Macaca_mulatta
ENSCGRG00001019696Pabpn110099.438ENSMMUG00000014747BCL2L2-PABPN110099.315Macaca_mulatta
ENSCGRG00001019696Pabpn110099.438ENSMNEG00000045065BCL2L2-PABPN110097.386Macaca_nemestrina
ENSCGRG00001019696Pabpn19485.119ENSMNEG00000035750-9992.908Macaca_nemestrina
ENSCGRG00001019696Pabpn19482.143ENSMLEG00000034623-9990.780Mandrillus_leucophaeus
ENSCGRG00001019696Pabpn110099.438ENSMLEG00000043862BCL2L2-PABPN110099.438Mandrillus_leucophaeus
ENSCGRG00001019696Pabpn18781.410ENSMAMG00000007979pabpn16881.281Mastacembelus_armatus
ENSCGRG00001019696Pabpn18781.410ENSMZEG00005011904pabpn16681.959Maylandia_zebra
ENSCGRG00001019696Pabpn1100100.000ENSMAUG00000007383Gm2052199100.000Mesocricetus_auratus
ENSCGRG00001019696Pabpn110099.438ENSMICG00000010002BCL2L2-PABPN110097.712Microcebus_murinus
ENSCGRG00001019696Pabpn110099.669ENSMOCG00000018557Gm2052110099.669Microtus_ochrogaster
ENSCGRG00001019696Pabpn19482.143ENSMMOG00000005405pabpn18682.524Mola_mola
ENSCGRG00001019696Pabpn19295.732ENSMODG00000004535-9191.727Monodelphis_domestica
ENSCGRG00001019696Pabpn18781.410ENSMALG00000019612pabpn16781.281Monopterus_albus
ENSCGRG00001019696Pabpn110098.315MGP_CAROLIEiJ_G0019276Gm205215798.413Mus_caroli
ENSCGRG00001019696Pabpn110099.007MGP_CAROLIEiJ_G0019277Pabpn110099.007Mus_caroli
ENSCGRG00001019696Pabpn110098.876ENSMUSG00000092232Gm205215798.942Mus_musculus
ENSCGRG00001019696Pabpn110099.338ENSMUSG00000022194Pabpn110099.338Mus_musculus
ENSCGRG00001019696Pabpn110099.338MGP_PahariEiJ_G0030295Pabpn1100100.000Mus_pahari
ENSCGRG00001019696Pabpn110098.876MGP_PahariEiJ_G0030294Gm205215798.942Mus_pahari
ENSCGRG00001019696Pabpn110099.338MGP_SPRETEiJ_G0020166Pabpn110099.338Mus_spretus
ENSCGRG00001019696Pabpn110098.876MGP_SPRETEiJ_G0020165Gm205215798.942Mus_spretus
ENSCGRG00001019696Pabpn19399.398ENSMPUG00000006775-9999.398Mustela_putorius_furo
ENSCGRG00001019696Pabpn19495.210ENSMLUG00000028677-9280.144Myotis_lucifugus
ENSCGRG00001019696Pabpn110098.315ENSMLUG00000003800-10097.354Myotis_lucifugus
ENSCGRG00001019696Pabpn19492.899ENSMLUG00000012452-7092.019Myotis_lucifugus
ENSCGRG00001019696Pabpn110099.438ENSNGAG00000019529Gm205215799.471Nannospalax_galili
ENSCGRG00001019696Pabpn19481.548ENSNBRG00000023955pabpn19481.548Neolamprologus_brichardi
ENSCGRG00001019696Pabpn18372.297ENSNLEG00000035292-9972.297Nomascus_leucogenys
ENSCGRG00001019696Pabpn19773.973ENSNLEG00000030598-7981.517Nomascus_leucogenys
ENSCGRG00001019696Pabpn110099.438ENSNLEG00000015007-7599.052Nomascus_leucogenys
ENSCGRG00001019696Pabpn110086.517ENSODEG00000011555-8986.228Octodon_degus
ENSCGRG00001019696Pabpn19483.832ENSODEG00000003739-9583.032Octodon_degus
ENSCGRG00001019696Pabpn110098.876ENSODEG00000002083BCL2L2-PABPN110096.732Octodon_degus
ENSCGRG00001019696Pabpn18781.410ENSONIG00000008112pabpn16681.959Oreochromis_niloticus
ENSCGRG00001019696Pabpn18295.890ENSOANG00000009218-10095.890Ornithorhynchus_anatinus
ENSCGRG00001019696Pabpn110098.315ENSOCUG00000016174PABPN110097.333Oryctolagus_cuniculus
ENSCGRG00001019696Pabpn19378.313ENSORLG00000027900pabpn18479.412Oryzias_latipes
ENSCGRG00001019696Pabpn18284.247ENSORLG00020004681pabpn16781.773Oryzias_latipes_hni
ENSCGRG00001019696Pabpn19482.143ENSORLG00015000018pabpn18682.524Oryzias_latipes_hsok
ENSCGRG00001019696Pabpn19377.711ENSOMEG00000016618pabpn17278.922Oryzias_melastigma
ENSCGRG00001019696Pabpn110099.438ENSOGAG00000008710PABPN110097.386Otolemur_garnettii
ENSCGRG00001019696Pabpn110099.438ENSOARG00000019336BCL2L2-PABPN15299.471Ovis_aries
ENSCGRG00001019696Pabpn19483.234ENSPPAG00000039421-9383.234Pan_paniscus
ENSCGRG00001019696Pabpn110099.438ENSPPAG00000028984BCL2L2-PABPN19999.398Pan_paniscus
ENSCGRG00001019696Pabpn110099.438ENSPPRG00000010567PABPN110097.386Panthera_pardus
ENSCGRG00001019696Pabpn110099.438ENSPTIG00000001063BCL2L2-PABPN110099.438Panthera_tigris_altaica
ENSCGRG00001019696Pabpn19480.240ENSPTRG00000047273-9974.368Pan_troglodytes
ENSCGRG00001019696Pabpn110099.438ENSPTRG00000006167BCL2L210097.386Pan_troglodytes
ENSCGRG00001019696Pabpn19485.119ENSPANG00000023326-9992.908Papio_anubis
ENSCGRG00001019696Pabpn110099.438ENSPANG00000021100BCL2L2-PABPN110097.386Papio_anubis
ENSCGRG00001019696Pabpn110061.453ENSPKIG00000008340pabpn1l9263.131Paramormyrops_kingsleyae
ENSCGRG00001019696Pabpn19482.738ENSPKIG00000018052pabpn18683.010Paramormyrops_kingsleyae
ENSCGRG00001019696Pabpn19484.524ENSPKIG00000008144-6782.759Paramormyrops_kingsleyae
ENSCGRG00001019696Pabpn16688.034ENSPSIG00000011959-8688.034Pelodiscus_sinensis
ENSCGRG00001019696Pabpn18780.769ENSPMGG00000022027pabpn16981.443Periophthalmus_magnuspinnatus
ENSCGRG00001019696Pabpn1100100.000ENSPEMG00000008332Gm20521100100.000Peromyscus_maniculatus_bairdii
ENSCGRG00001019696Pabpn17386.923ENSPMAG00000006212pabpn18476.355Petromyzon_marinus
ENSCGRG00001019696Pabpn110096.629ENSPCIG00000027751-9291.815Phascolarctos_cinereus
ENSCGRG00001019696Pabpn19477.515ENSPFOG00000010351pabpn18680.193Poecilia_formosa
ENSCGRG00001019696Pabpn18780.255ENSPLAG00000022696pabpn16880.392Poecilia_latipinna
ENSCGRG00001019696Pabpn19477.515ENSPMEG00000020856pabpn18680.193Poecilia_mexicana
ENSCGRG00001019696Pabpn19477.515ENSPREG00000011278pabpn18680.676Poecilia_reticulata
ENSCGRG00001019696Pabpn19399.398ENSPPYG00000005663PABPN19192.549Pongo_abelii
ENSCGRG00001019696Pabpn18780.128ENSPCAG00000005902PABPN19283.704Procavia_capensis
ENSCGRG00001019696Pabpn110099.438ENSPCOG00000028047BCL2L2-PABPN110097.712Propithecus_coquereli
ENSCGRG00001019696Pabpn110097.191ENSPVAG00000005270PABPN19288.214Pteropus_vampyrus
ENSCGRG00001019696Pabpn19481.548ENSPNYG00000013182pabpn18682.039Pundamilia_nyererei
ENSCGRG00001019696Pabpn19483.333ENSPNAG00000023526pabpn18683.495Pygocentrus_nattereri
ENSCGRG00001019696Pabpn110062.011ENSPNAG00000021666pabpn1l9464.179Pygocentrus_nattereri
ENSCGRG00001019696Pabpn110099.438ENSRNOG00000042195Pabpn110099.338Rattus_norvegicus
ENSCGRG00001019696Pabpn19487.425ENSRBIG00000039547-9278.700Rhinopithecus_bieti
ENSCGRG00001019696Pabpn19399.398ENSRBIG00000040762BCL2L2-PABPN15599.435Rhinopithecus_bieti
ENSCGRG00001019696Pabpn19483.234ENSRBIG00000042811-8885.308Rhinopithecus_bieti
ENSCGRG00001019696Pabpn19479.042ENSRROG00000036409-6782.028Rhinopithecus_roxellana
ENSCGRG00001019696Pabpn19488.024ENSRROG00000040409-7585.366Rhinopithecus_roxellana
ENSCGRG00001019696Pabpn110099.438ENSRROG00000045535BCL2L2-PABPN110099.438Rhinopithecus_roxellana
ENSCGRG00001019696Pabpn110092.670ENSSBOG00000026930BCL2L2-PABPN19999.398Saimiri_boliviensis_boliviensis
ENSCGRG00001019696Pabpn110096.629ENSSHAG00000014841-8796.825Sarcophilus_harrisii
ENSCGRG00001019696Pabpn110076.404ENSSHAG00000007707-8973.934Sarcophilus_harrisii
ENSCGRG00001019696Pabpn19482.738ENSSFOG00015012565pabpn19082.039Scleropages_formosus
ENSCGRG00001019696Pabpn110060.112ENSSFOG00015015833pabpn1l8863.131Scleropages_formosus
ENSCGRG00001019696Pabpn19482.143ENSSFOG00015014718pabpn18682.524Scleropages_formosus
ENSCGRG00001019696Pabpn19481.548ENSSMAG00000020157pabpn18682.039Scophthalmus_maximus
ENSCGRG00001019696Pabpn18781.410ENSSDUG00000020582pabpn16781.281Seriola_dumerili
ENSCGRG00001019696Pabpn19481.548ENSSLDG00000007118pabpn18682.039Seriola_lalandi_dorsalis
ENSCGRG00001019696Pabpn19492.216ENSSPUG00000018308-9492.216Sphenodon_punctatus
ENSCGRG00001019696Pabpn19481.548ENSSPAG00000021658pabpn18682.039Stegastes_partitus
ENSCGRG00001019696Pabpn19954.545ENSSSCG00000038472-9153.892Sus_scrofa
ENSCGRG00001019696Pabpn110099.438ENSSSCG00000002023PABPN110097.386Sus_scrofa
ENSCGRG00001019696Pabpn19974.576ENSSSCG00000034805-7668.627Sus_scrofa
ENSCGRG00001019696Pabpn19482.738ENSTRUG00000023664pabpn18683.010Takifugu_rubripes
ENSCGRG00001019696Pabpn19478.107ENSTNIG00000005369pabpn19379.227Tetraodon_nigroviridis
ENSCGRG00001019696Pabpn110099.438ENSUAMG00000024460PABPN110096.732Ursus_americanus
ENSCGRG00001019696Pabpn110099.438ENSUMAG00000014288BCL2L2-PABPN15799.471Ursus_maritimus
ENSCGRG00001019696Pabpn110099.438ENSVVUG00000019912BCL2L2-PABPN18787.783Vulpes_vulpes
ENSCGRG00001019696Pabpn19489.222ENSXETG00000014597pabpn16692.386Xenopus_tropicalis
ENSCGRG00001019696Pabpn19769.143ENSXCOG00000005158pabpn18980.921Xiphophorus_couchianus
ENSCGRG00001019696Pabpn19478.107ENSXMAG00000006196pabpn18681.159Xiphophorus_maculatus

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