EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00001019846 (Gene tree)
Gene ID: -
Gene Symbol: Lsg1
Alias: D16Bwg1547e
Full Name: large 60S subunit nuclear export GTPase 1
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Minus strand
Length: 28098 bases
Position: chrscaffold_8:13535188-13563285
Accession: 100773753
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001020822	MMR_HSR1	PF01926.23	4.3e-14	1	1
ENSCGRP00001020812	MMR_HSR1	PF01926.23	4.6e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001025056	-	2649	-	ENSCGRP00001020812	648 (aa)	XP_003495431	G3GSI7
ENSCGRT00001025066	-	1899	-	ENSCGRP00001020822	632 (aa)	-	-

Gene Model

Click here to download ENSCGRG00001019846's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001019846's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00001019846	Lsg1	67	30.594	ENSCGRG00001004986	Gnl1	65	31.002

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001019846	Lsg1	100	81.818	ENSG00000041802	LSG1	98	90.805	Homo_sapiens
ENSCGRG00001019846	Lsg1	99	65.781	ENSAPOG00000009694	lsg1	99	65.385	Acanthochromis_polyacanthus
ENSCGRG00001019846	Lsg1	99	80.152	ENSAMEG00000009343	LSG1	99	79.545	Ailuropoda_melanoleuca
ENSCGRG00001019846	Lsg1	98	66.035	ENSACIG00000012406	lsg1	99	64.352	Amphilophus_citrinellus
ENSCGRG00001019846	Lsg1	99	64.899	ENSAOCG00000016066	lsg1	99	64.119	Amphiprion_ocellaris
ENSCGRG00001019846	Lsg1	99	65.211	ENSAPEG00000003252	lsg1	99	64.431	Amphiprion_percula
ENSCGRG00001019846	Lsg1	98	66.349	ENSATEG00000011794	lsg1	99	65.991	Anabas_testudineus
ENSCGRG00001019846	Lsg1	95	64.480	ENSACAG00000004222	LSG1	99	63.550	Anolis_carolinensis
ENSCGRG00001019846	Lsg1	100	83.333	ENSANAG00000021153	LSG1	100	83.333	Aotus_nancymaae
ENSCGRG00001019846	Lsg1	99	64.482	ENSACLG00000000520	lsg1	99	63.872	Astatotilapia_calliptera
ENSCGRG00001019846	Lsg1	99	63.415	ENSAMXG00000008271	lsg1	99	63.775	Astyanax_mexicanus
ENSCGRG00001019846	Lsg1	100	81.623	ENSBTAG00000008461	LSG1	100	82.569	Bos_taurus
ENSCGRG00001019846	Lsg1	64	51.724	WBGene00016907	C53H9.2	90	51.724	Caenorhabditis_elegans
ENSCGRG00001019846	Lsg1	100	83.333	ENSCJAG00000013962	LSG1	100	83.333	Callithrix_jacchus
ENSCGRG00001019846	Lsg1	95	80.831	ENSCAFG00000013445	LSG1	99	80.831	Canis_familiaris
ENSCGRG00001019846	Lsg1	99	80.000	ENSCAFG00020002216	LSG1	99	81.029	Canis_lupus_dingo
ENSCGRG00001019846	Lsg1	99	82.236	ENSCHIG00000015769	LSG1	99	82.236	Capra_hircus
ENSCGRG00001019846	Lsg1	100	84.697	ENSTSYG00000001447	LSG1	100	84.697	Carlito_syrichta
ENSCGRG00001019846	Lsg1	95	77.010	ENSCAPG00000009856	LSG1	100	76.206	Cavia_aperea
ENSCGRG00001019846	Lsg1	100	82.576	ENSCCAG00000035744	LSG1	100	82.424	Cebus_capucinus
ENSCGRG00001019846	Lsg1	100	82.273	ENSCATG00000042060	LSG1	100	80.909	Cercocebus_atys
ENSCGRG00001019846	Lsg1	100	83.030	ENSCSAG00000008796	LSG1	92	82.879	Chlorocebus_sabaeus
ENSCGRG00001019846	Lsg1	99	69.138	ENSCPBG00000015941	LSG1	83	68.524	Chrysemys_picta_bellii
ENSCGRG00001019846	Lsg1	67	62.632	ENSCING00000007079	-	92	62.632	Ciona_intestinalis
ENSCGRG00001019846	Lsg1	81	53.992	ENSCSAVG00000002514	-	93	62.245	Ciona_savignyi
ENSCGRG00001019846	Lsg1	100	82.727	ENSCANG00000030709	LSG1	100	82.576	Colobus_angolensis_palliatus
ENSCGRG00001019846	Lsg1	100	100.000	ENSCGRG00000014617	Lsg1	100	100.000	Cricetulus_griseus_crigri
ENSCGRG00001019846	Lsg1	98	64.465	ENSCSEG00000008522	lsg1	99	63.790	Cynoglossus_semilaevis
ENSCGRG00001019846	Lsg1	97	65.600	ENSCVAG00000002484	lsg1	99	66.458	Cyprinodon_variegatus
ENSCGRG00001019846	Lsg1	99	66.464	ENSDARG00000015352	lsg1	99	65.512	Danio_rerio
ENSCGRG00001019846	Lsg1	100	81.307	ENSDNOG00000006224	LSG1	100	80.851	Dasypus_novemcinctus
ENSCGRG00001019846	Lsg1	99	48.527	FBgn0266284	Ns3	99	48.402	Drosophila_melanogaster
ENSCGRG00001019846	Lsg1	88	92.000	ENSETEG00000003888	LSG1	89	92.000	Echinops_telfairi
ENSCGRG00001019846	Lsg1	88	56.655	ENSEBUG00000003119	lsg1	85	56.552	Eptatretus_burgeri
ENSCGRG00001019846	Lsg1	100	84.091	ENSEASG00005000678	LSG1	100	84.091	Equus_asinus_asinus
ENSCGRG00001019846	Lsg1	100	84.091	ENSECAG00000017659	LSG1	100	84.091	Equus_caballus
ENSCGRG00001019846	Lsg1	87	81.034	ENSEEUG00000015217	LSG1	87	81.034	Erinaceus_europaeus
ENSCGRG00001019846	Lsg1	99	63.480	ENSELUG00000023973	lsg1	99	62.853	Esox_lucius
ENSCGRG00001019846	Lsg1	99	82.094	ENSFCAG00000024957	LSG1	99	82.094	Felis_catus
ENSCGRG00001019846	Lsg1	99	63.444	ENSFALG00000007210	LSG1	99	63.359	Ficedula_albicollis
ENSCGRG00001019846	Lsg1	100	79.661	ENSFDAG00000017373	LSG1	100	79.300	Fukomys_damarensis
ENSCGRG00001019846	Lsg1	97	65.446	ENSFHEG00000003680	lsg1	99	65.062	Fundulus_heteroclitus
ENSCGRG00001019846	Lsg1	84	71.915	ENSGMOG00000015834	lsg1	99	61.025	Gadus_morhua
ENSCGRG00001019846	Lsg1	99	63.142	ENSGALG00000007058	LSG1	87	64.653	Gallus_gallus
ENSCGRG00001019846	Lsg1	97	67.423	ENSGAFG00000015831	lsg1	99	67.195	Gambusia_affinis
ENSCGRG00001019846	Lsg1	98	64.241	ENSGACG00000009323	lsg1	99	63.876	Gasterosteus_aculeatus
ENSCGRG00001019846	Lsg1	100	81.970	ENSGGOG00000000520	LSG1	100	81.818	Gorilla_gorilla
ENSCGRG00001019846	Lsg1	99	64.969	ENSHBUG00000005659	lsg1	99	64.352	Haplochromis_burtoni
ENSCGRG00001019846	Lsg1	100	79.005	ENSHGLG00000017390	LSG1	100	78.694	Heterocephalus_glaber_female
ENSCGRG00001019846	Lsg1	100	79.005	ENSHGLG00100018587	LSG1	100	78.694	Heterocephalus_glaber_male
ENSCGRG00001019846	Lsg1	97	65.335	ENSHCOG00000016848	lsg1	99	65.109	Hippocampus_comes
ENSCGRG00001019846	Lsg1	99	65.674	ENSIPUG00000008631	lsg1	99	65.421	Ictalurus_punctatus
ENSCGRG00001019846	Lsg1	81	79.283	ENSSTOG00000010234	LSG1	99	78.884	Ictidomys_tridecemlineatus
ENSCGRG00001019846	Lsg1	100	82.901	ENSJJAG00000015513	Lsg1	100	82.481	Jaculus_jaculus
ENSCGRG00001019846	Lsg1	98	64.960	ENSKMAG00000009681	lsg1	99	64.577	Kryptolebias_marmoratus
ENSCGRG00001019846	Lsg1	98	64.263	ENSLBEG00000024261	lsg1	99	64.263	Labrus_bergylta
ENSCGRG00001019846	Lsg1	99	66.170	ENSLACG00000013399	LSG1	99	66.170	Latimeria_chalumnae
ENSCGRG00001019846	Lsg1	98	65.957	ENSLOCG00000004918	lsg1	99	65.522	Lepisosteus_oculatus
ENSCGRG00001019846	Lsg1	100	82.236	ENSLAFG00000012919	-	100	82.083	Loxodonta_africana
ENSCGRG00001019846	Lsg1	100	82.576	ENSMFAG00000039903	LSG1	100	81.212	Macaca_fascicularis
ENSCGRG00001019846	Lsg1	100	82.727	ENSMMUG00000010708	LSG1	100	82.576	Macaca_mulatta
ENSCGRG00001019846	Lsg1	100	82.727	ENSMNEG00000031538	LSG1	100	81.364	Macaca_nemestrina
ENSCGRG00001019846	Lsg1	100	82.424	ENSMLEG00000041184	LSG1	100	82.424	Mandrillus_leucophaeus
ENSCGRG00001019846	Lsg1	99	64.806	ENSMAMG00000000470	lsg1	99	64.386	Mastacembelus_armatus
ENSCGRG00001019846	Lsg1	99	65.123	ENSMZEG00005017865	lsg1	99	64.506	Maylandia_zebra
ENSCGRG00001019846	Lsg1	88	64.796	ENSMGAG00000007050	LSG1	99	66.497	Meleagris_gallopavo
ENSCGRG00001019846	Lsg1	91	95.478	ENSMAUG00000016976	Lsg1	93	95.478	Mesocricetus_auratus
ENSCGRG00001019846	Lsg1	100	82.496	ENSMICG00000049087	LSG1	100	82.496	Microcebus_murinus
ENSCGRG00001019846	Lsg1	100	91.770	ENSMOCG00000022136	Lsg1	100	92.081	Microtus_ochrogaster
ENSCGRG00001019846	Lsg1	84	74.892	ENSMMOG00000008884	lsg1	94	74.180	Mola_mola
ENSCGRG00001019846	Lsg1	99	58.434	ENSMODG00000019828	LSG1	99	57.982	Monodelphis_domestica
ENSCGRG00001019846	Lsg1	100	87.883	MGP_CAROLIEiJ_G0020648	Lsg1	100	87.730	Mus_caroli
ENSCGRG00001019846	Lsg1	100	88.344	ENSMUSG00000022538	Lsg1	100	88.190	Mus_musculus
ENSCGRG00001019846	Lsg1	98	88.785	MGP_PahariEiJ_G0016352	Lsg1	100	88.515	Mus_pahari
ENSCGRG00001019846	Lsg1	100	88.190	MGP_SPRETEiJ_G0021544	Lsg1	100	88.037	Mus_spretus
ENSCGRG00001019846	Lsg1	99	80.273	ENSMPUG00000003734	LSG1	99	80.273	Mustela_putorius_furo
ENSCGRG00001019846	Lsg1	99	85.145	ENSMLUG00000012548	LSG1	99	84.533	Myotis_lucifugus
ENSCGRG00001019846	Lsg1	100	86.810	ENSNGAG00000021872	Lsg1	100	86.810	Nannospalax_galili
ENSCGRG00001019846	Lsg1	100	82.576	ENSNLEG00000008293	LSG1	100	82.424	Nomascus_leucogenys
ENSCGRG00001019846	Lsg1	70	71.134	ENSMEUG00000009041	-	82	71.134	Notamacropus_eugenii
ENSCGRG00001019846	Lsg1	99	64.067	ENSONIG00000002635	lsg1	99	64.067	Oreochromis_niloticus
ENSCGRG00001019846	Lsg1	95	73.591	ENSOANG00000012742	LSG1	99	72.786	Ornithorhynchus_anatinus
ENSCGRG00001019846	Lsg1	100	84.091	ENSOCUG00000004817	LSG1	100	84.091	Oryctolagus_cuniculus
ENSCGRG00001019846	Lsg1	98	65.858	ENSORLG00000007695	lsg1	99	64.873	Oryzias_latipes
ENSCGRG00001019846	Lsg1	98	65.342	ENSORLG00020016286	lsg1	99	64.297	Oryzias_latipes_hni
ENSCGRG00001019846	Lsg1	98	65.372	ENSORLG00015012025	lsg1	99	64.613	Oryzias_latipes_hsok
ENSCGRG00001019846	Lsg1	98	64.960	ENSOMEG00000022379	lsg1	99	64.420	Oryzias_melastigma
ENSCGRG00001019846	Lsg1	100	81.928	ENSOGAG00000003475	LSG1	100	81.777	Otolemur_garnettii
ENSCGRG00001019846	Lsg1	99	80.704	ENSOARG00000020403	LSG1	99	81.040	Ovis_aries
ENSCGRG00001019846	Lsg1	100	81.818	ENSPPAG00000029271	LSG1	100	81.818	Pan_paniscus
ENSCGRG00001019846	Lsg1	99	81.532	ENSPPRG00000010281	LSG1	99	80.931	Panthera_pardus
ENSCGRG00001019846	Lsg1	99	82.549	ENSPTIG00000010789	LSG1	99	82.549	Panthera_tigris_altaica
ENSCGRG00001019846	Lsg1	100	81.667	ENSPTRG00000015760	LSG1	100	81.667	Pan_troglodytes
ENSCGRG00001019846	Lsg1	100	82.727	ENSPANG00000018249	LSG1	100	81.364	Papio_anubis
ENSCGRG00001019846	Lsg1	98	64.882	ENSPKIG00000002895	lsg1	100	64.961	Paramormyrops_kingsleyae
ENSCGRG00001019846	Lsg1	96	66.405	ENSPSIG00000009821	LSG1	99	65.008	Pelodiscus_sinensis
ENSCGRG00001019846	Lsg1	95	65.296	ENSPMGG00000000931	lsg1	99	65.461	Periophthalmus_magnuspinnatus
ENSCGRG00001019846	Lsg1	100	92.627	ENSPEMG00000012082	-	100	92.166	Peromyscus_maniculatus_bairdii
ENSCGRG00001019846	Lsg1	99	60.329	ENSPMAG00000007451	lsg1	99	59.731	Petromyzon_marinus
ENSCGRG00001019846	Lsg1	99	67.708	ENSPCIG00000013890	LSG1	83	67.368	Phascolarctos_cinereus
ENSCGRG00001019846	Lsg1	97	66.561	ENSPFOG00000021882	lsg1	99	66.460	Poecilia_formosa
ENSCGRG00001019846	Lsg1	97	67.363	ENSPLAG00000019536	lsg1	99	67.241	Poecilia_latipinna
ENSCGRG00001019846	Lsg1	97	65.873	ENSPMEG00000017281	lsg1	99	65.789	Poecilia_mexicana
ENSCGRG00001019846	Lsg1	97	57.504	ENSPREG00000006048	lsg1	99	57.165	Poecilia_reticulata
ENSCGRG00001019846	Lsg1	92	81.281	ENSPPYG00000014425	LSG1	100	81.117	Pongo_abelii
ENSCGRG00001019846	Lsg1	90	90.667	ENSPCAG00000005511	LSG1	81	90.667	Procavia_capensis
ENSCGRG00001019846	Lsg1	100	82.879	ENSPCOG00000012360	LSG1	100	82.569	Propithecus_coquereli
ENSCGRG00001019846	Lsg1	99	64.329	ENSPNYG00000021994	lsg1	99	63.720	Pundamilia_nyererei
ENSCGRG00001019846	Lsg1	99	65.895	ENSPNAG00000015533	lsg1	99	65.789	Pygocentrus_nattereri
ENSCGRG00001019846	Lsg1	100	89.466	ENSRNOG00000001727	Lsg1	100	89.313	Rattus_norvegicus
ENSCGRG00001019846	Lsg1	100	81.970	ENSRBIG00000029053	LSG1	100	81.515	Rhinopithecus_bieti
ENSCGRG00001019846	Lsg1	100	81.970	ENSRROG00000037702	LSG1	100	81.515	Rhinopithecus_roxellana
ENSCGRG00001019846	Lsg1	83	40.437	YGL099W	LSG1	65	58.084	Saccharomyces_cerevisiae
ENSCGRG00001019846	Lsg1	100	83.333	ENSSBOG00000034938	LSG1	100	83.333	Saimiri_boliviensis_boliviensis
ENSCGRG00001019846	Lsg1	78	67.366	ENSSHAG00000003487	LSG1	99	66.922	Sarcophilus_harrisii
ENSCGRG00001019846	Lsg1	98	65.163	ENSSFOG00015008955	lsg1	99	64.451	Scleropages_formosus
ENSCGRG00001019846	Lsg1	98	65.149	ENSSDUG00000004622	lsg1	99	65.000	Seriola_dumerili
ENSCGRG00001019846	Lsg1	98	65.446	ENSSLDG00000010869	lsg1	99	64.760	Seriola_lalandi_dorsalis
ENSCGRG00001019846	Lsg1	83	81.579	ENSSARG00000012981	LSG1	84	81.389	Sorex_araneus
ENSCGRG00001019846	Lsg1	99	67.781	ENSSPUG00000016347	LSG1	99	67.275	Sphenodon_punctatus
ENSCGRG00001019846	Lsg1	99	65.457	ENSSPAG00000005508	lsg1	99	65.457	Stegastes_partitus
ENSCGRG00001019846	Lsg1	99	81.317	ENSSSCG00000011827	LSG1	99	80.704	Sus_scrofa
ENSCGRG00001019846	Lsg1	89	65.101	ENSTGUG00000009068	LSG1	99	64.094	Taeniopygia_guttata
ENSCGRG00001019846	Lsg1	97	63.107	ENSTRUG00000017380	lsg1	99	62.303	Takifugu_rubripes
ENSCGRG00001019846	Lsg1	97	64.094	ENSTNIG00000015570	lsg1	99	64.165	Tetraodon_nigroviridis
ENSCGRG00001019846	Lsg1	99	75.229	ENSTTRG00000000559	LSG1	99	74.006	Tursiops_truncatus
ENSCGRG00001019846	Lsg1	99	81.487	ENSUAMG00000012454	LSG1	99	81.487	Ursus_americanus
ENSCGRG00001019846	Lsg1	99	81.487	ENSUMAG00000000855	LSG1	99	81.487	Ursus_maritimus
ENSCGRG00001019846	Lsg1	95	76.518	ENSVPAG00000012400	LSG1	99	76.518	Vicugna_pacos
ENSCGRG00001019846	Lsg1	95	80.288	ENSVVUG00000008956	LSG1	97	80.288	Vulpes_vulpes
ENSCGRG00001019846	Lsg1	99	65.846	ENSXETG00000003451	lsg1	99	65.835	Xenopus_tropicalis
ENSCGRG00001019846	Lsg1	97	66.506	ENSXCOG00000003239	lsg1	99	66.510	Xiphophorus_couchianus
ENSCGRG00001019846	Lsg1	97	66.294	ENSXMAG00000005536	lsg1	99	65.732	Xiphophorus_maculatus