EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00001019923 (Gene tree)
Gene ID: -
Gene Symbol: Apaf1
Alias: 6230400I06Rik|Apaf1l
Full Name: apoptotic peptidase activating factor 1
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Minus strand
Length: 70213 bases
Position: chrscaffold_17:17861653-17931865
Accession: 1306796
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001020947	eIF2A	PF08662.11	9.1e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001025191	-	3750	-	ENSCGRP00001020947	1249 (aa)	-	-

Gene Model

Click here to download ENSCGRG00001019923's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001019923's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00001019923	Apaf1	51	33.129	ENSCGRG00001007357	Poc1a	83	31.902

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001019923	Apaf1	100	85.691	ENSCAFG00020023804	APAF1	100	85.612	Canis_lupus_dingo
ENSCGRG00001019923	Apaf1	100	88.070	ENSDNOG00000011420	APAF1	100	88.201	Dasypus_novemcinctus
ENSCGRG00001019923	Apaf1	100	87.270	ENSJJAG00000014169	Apaf1	100	87.270	Jaculus_jaculus
ENSCGRG00001019923	Apaf1	100	69.912	ENSMGAG00000011573	APAF1	99	69.912	Meleagris_gallopavo
ENSCGRG00001019923	Apaf1	94	85.535	ENSPCAG00000005560	APAF1	94	85.535	Procavia_capensis
ENSCGRG00001019923	Apaf1	99	70.456	ENSTGUG00000008761	APAF1	99	70.456	Taeniopygia_guttata
ENSCGRG00001019923	Apaf1	100	82.400	ENSVVUG00000018651	APAF1	100	84.000	Vulpes_vulpes