EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00001020018 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: RAB5A%2C member RAS oncogene family
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Minus strand
Length: 21494 bases
Position: chrscaffold_29:15733539-15755032
Accession: 100772343
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001021070	MMR_HSR1	PF01926.23	8.8e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001025314	-	648	-	ENSCGRP00001021070	215 (aa)	XP_007635960	G3H8L7

Gene Model

Click here to download ENSCGRG00001020018's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001020018's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00001020018	-	75	36.585	ENSCGRG00001022502	Rab39b	77	36.585
ENSCGRG00001020018	-	100	81.860	ENSCGRG00001000428	Rab5b	100	81.860
ENSCGRG00001020018	-	90	35.323	ENSCGRG00001001220	Rab9b	97	35.323
ENSCGRG00001020018	-	81	40.782	ENSCGRG00001021807	Rab7	80	47.436
ENSCGRG00001020018	-	91	41.748	ENSCGRG00001013827	Rab11b	94	41.748
ENSCGRG00001020018	-	90	38.342	ENSCGRG00001023636	Rab35	96	38.342
ENSCGRG00001020018	-	78	42.515	ENSCGRG00001020833	-	79	44.079
ENSCGRG00001020018	-	79	37.059	ENSCGRG00001006958	Rab12	57	37.500
ENSCGRG00001020018	-	90	46.429	ENSCGRG00001014956	Rab1b	96	46.429
ENSCGRG00001020018	-	89	38.614	ENSCGRG00001006440	Rab14	94	38.614
ENSCGRG00001020018	-	80	30.387	ENSCGRG00001013183	-	95	30.387
ENSCGRG00001020018	-	90	39.175	ENSCGRG00001021505	Rab13	95	39.175
ENSCGRG00001020018	-	90	35.821	ENSCGRG00001010235	Rab9	97	35.821
ENSCGRG00001020018	-	95	42.718	ENSCGRG00001013041	Rab6b	98	42.718
ENSCGRG00001020018	-	90	43.814	ENSCGRG00001012691	-	95	43.814
ENSCGRG00001020018	-	91	42.079	ENSCGRG00001017341	Rab25	94	42.079
ENSCGRG00001020018	-	73	33.121	ENSCGRG00001021366	Rheb	85	33.121
ENSCGRG00001020018	-	82	31.667	ENSCGRG00001018735	Hras	94	31.667
ENSCGRG00001020018	-	90	48.718	ENSCGRG00001020667	Rab22a	98	48.718
ENSCGRG00001020018	-	100	87.037	ENSCGRG00001014226	Rab5c	100	87.037
ENSCGRG00001020018	-	90	40.816	ENSCGRG00001017519	Rab18	93	40.816
ENSCGRG00001020018	-	73	32.500	ENSCGRG00001000893	Rab34	62	32.500
ENSCGRG00001020018	-	74	35.928	ENSCGRG00001021894	Rabl2	72	35.928
ENSCGRG00001020018	-	74	38.125	ENSCGRG00001008994	Rab23	67	38.125
ENSCGRG00001020018	-	60	32.576	ENSCGRG00001020777	Arl8a	66	32.576
ENSCGRG00001020018	-	78	33.136	ENSCGRG00001009212	-	76	33.136
ENSCGRG00001020018	-	81	43.678	ENSCGRG00001021787	Rab30	86	43.678
ENSCGRG00001020018	-	56	33.065	ENSCGRG00001018115	Arl8b	63	33.065
ENSCGRG00001020018	-	91	41.951	ENSCGRG00001023313	Rab11a	94	41.951
ENSCGRG00001020018	-	75	41.566	ENSCGRG00001001211	Rab33a	70	41.566
ENSCGRG00001020018	-	77	40.351	ENSCGRG00001016897	Rab33b	75	40.351
ENSCGRG00001020018	-	72	37.500	ENSCGRG00001019426	Rab42	74	37.500
ENSCGRG00001020018	-	74	40.881	ENSCGRG00001006853	Rab15	75	40.881
ENSCGRG00001020018	-	75	41.615	ENSCGRG00001020076	Rab2a	76	41.615
ENSCGRG00001020018	-	95	41.546	ENSCGRG00001018153	Rab6a	98	41.546
ENSCGRG00001020018	-	80	31.667	ENSCGRG00001006529	-	94	31.667
ENSCGRG00001020018	-	83	31.111	ENSCGRG00001020093	Nras	94	31.111

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001020018	-	100	98.140	ENSG00000144566	RAB5A	100	98.140	Homo_sapiens
ENSCGRG00001020018	-	100	92.130	ENSAPOG00000021391	rab5aa	100	92.130	Acanthochromis_polyacanthus
ENSCGRG00001020018	-	100	98.140	ENSAMEG00000000954	RAB5A	100	98.140	Ailuropoda_melanoleuca
ENSCGRG00001020018	-	100	92.593	ENSACIG00000019251	rab5aa	100	92.593	Amphilophus_citrinellus
ENSCGRG00001020018	-	100	93.056	ENSAOCG00000000090	rab5aa	100	93.056	Amphiprion_ocellaris
ENSCGRG00001020018	-	100	93.056	ENSAPEG00000013376	rab5aa	100	93.056	Amphiprion_percula
ENSCGRG00001020018	-	100	92.593	ENSATEG00000014748	rab5aa	100	92.593	Anabas_testudineus
ENSCGRG00001020018	-	100	94.419	ENSACAG00000000017	RAB5A	100	94.419	Anolis_carolinensis
ENSCGRG00001020018	-	100	98.140	ENSANAG00000025120	RAB5A	100	98.140	Aotus_nancymaae
ENSCGRG00001020018	-	100	93.056	ENSACLG00000018066	rab5aa	100	93.056	Astatotilapia_calliptera
ENSCGRG00001020018	-	100	90.323	ENSAMXG00000035919	rab5ab	100	90.323	Astyanax_mexicanus
ENSCGRG00001020018	-	100	92.130	ENSAMXG00000036179	rab5aa	100	92.130	Astyanax_mexicanus
ENSCGRG00001020018	-	100	97.674	ENSBTAG00000046385	RAB5A	100	97.674	Bos_taurus
ENSCGRG00001020018	-	100	98.140	ENSCJAG00000048394	RAB5A	100	98.140	Callithrix_jacchus
ENSCGRG00001020018	-	100	98.140	ENSCAFG00000005814	RAB5A	100	98.140	Canis_familiaris
ENSCGRG00001020018	-	100	98.140	ENSCAFG00020027287	RAB5A	100	98.140	Canis_lupus_dingo
ENSCGRG00001020018	-	100	97.209	ENSCHIG00000025419	-	100	97.209	Capra_hircus
ENSCGRG00001020018	-	100	93.488	ENSTSYG00000030238	-	100	93.488	Carlito_syrichta
ENSCGRG00001020018	-	100	98.605	ENSTSYG00000007642	-	100	98.605	Carlito_syrichta
ENSCGRG00001020018	-	100	98.140	ENSCCAG00000022405	RAB5A	100	98.140	Cebus_capucinus
ENSCGRG00001020018	-	100	98.140	ENSCATG00000033588	-	100	98.140	Cercocebus_atys
ENSCGRG00001020018	-	100	97.209	ENSCLAG00000006053	-	100	97.209	Chinchilla_lanigera
ENSCGRG00001020018	-	100	98.140	ENSCSAG00000009831	RAB5A	100	98.140	Chlorocebus_sabaeus
ENSCGRG00001020018	-	100	94.419	ENSCPBG00000022559	RAB5A	100	94.419	Chrysemys_picta_bellii
ENSCGRG00001020018	-	100	98.140	ENSCANG00000043514	RAB5A	100	98.140	Colobus_angolensis_palliatus
ENSCGRG00001020018	-	100	100.000	ENSCGRG00000002786	-	100	100.000	Cricetulus_griseus_crigri
ENSCGRG00001020018	-	99	93.023	ENSCVAG00000008239	rab5aa	99	93.023	Cyprinodon_variegatus
ENSCGRG00001020018	-	99	92.558	ENSDARG00000007257	rab5ab	99	92.558	Danio_rerio
ENSCGRG00001020018	-	100	92.130	ENSDARG00000018602	rab5aa	100	92.130	Danio_rerio
ENSCGRG00001020018	-	100	97.674	ENSDNOG00000038467	RAB5A	100	97.674	Dasypus_novemcinctus
ENSCGRG00001020018	-	100	98.140	ENSDORG00000024958	-	100	98.140	Dipodomys_ordii
ENSCGRG00001020018	-	100	97.674	ENSEASG00005005818	RAB5A	100	97.674	Equus_asinus_asinus
ENSCGRG00001020018	-	100	98.140	ENSECAG00000019062	RAB5A	100	98.140	Equus_caballus
ENSCGRG00001020018	-	100	97.209	ENSEEUG00000009044	RAB5A	100	97.209	Erinaceus_europaeus
ENSCGRG00001020018	-	100	92.593	ENSELUG00000006462	rab5aa	100	92.593	Esox_lucius
ENSCGRG00001020018	-	99	92.093	ENSELUG00000013436	rab5ab	99	92.093	Esox_lucius
ENSCGRG00001020018	-	100	98.140	ENSFCAG00000039795	-	100	98.140	Felis_catus
ENSCGRG00001020018	-	100	95.349	ENSFALG00000009239	RAB5A	100	95.349	Ficedula_albicollis
ENSCGRG00001020018	-	100	97.209	ENSFDAG00000005631	-	100	97.209	Fukomys_damarensis
ENSCGRG00001020018	-	99	93.023	ENSFHEG00000014070	rab5aa	99	93.023	Fundulus_heteroclitus
ENSCGRG00001020018	-	84	92.818	ENSGMOG00000007127	RAB5A	99	92.818	Gadus_morhua
ENSCGRG00001020018	-	99	91.163	ENSGMOG00000002868	rab5aa	99	91.163	Gadus_morhua
ENSCGRG00001020018	-	100	95.349	ENSGALG00000011272	RAB5A	100	95.349	Gallus_gallus
ENSCGRG00001020018	-	99	93.953	ENSGAFG00000011619	rab5aa	99	93.953	Gambusia_affinis
ENSCGRG00001020018	-	100	91.204	ENSGACG00000004997	rab5aa	100	91.204	Gasterosteus_aculeatus
ENSCGRG00001020018	-	100	94.884	ENSGAGG00000005319	RAB5A	100	94.884	Gopherus_agassizii
ENSCGRG00001020018	-	100	98.140	ENSGGOG00000015981	RAB5A	100	98.140	Gorilla_gorilla
ENSCGRG00001020018	-	100	93.056	ENSHBUG00000003752	rab5aa	100	93.056	Haplochromis_burtoni
ENSCGRG00001020018	-	99	89.720	ENSHGLG00000017749	-	97	89.720	Heterocephalus_glaber_female
ENSCGRG00001020018	-	96	98.551	ENSHGLG00000006357	-	99	98.551	Heterocephalus_glaber_female
ENSCGRG00001020018	-	99	89.720	ENSHGLG00100008816	-	97	89.720	Heterocephalus_glaber_male
ENSCGRG00001020018	-	100	98.140	ENSHGLG00100007553	RAB5A	100	98.140	Heterocephalus_glaber_male
ENSCGRG00001020018	-	100	90.323	ENSIPUG00000023392	rab5a	100	90.323	Ictalurus_punctatus
ENSCGRG00001020018	-	100	97.674	ENSSTOG00000026229	RAB5A	100	97.674	Ictidomys_tridecemlineatus
ENSCGRG00001020018	-	100	97.674	ENSJJAG00000020190	Rab5a	100	97.674	Jaculus_jaculus
ENSCGRG00001020018	-	100	93.519	ENSKMAG00000005111	rab5aa	100	93.519	Kryptolebias_marmoratus
ENSCGRG00001020018	-	98	93.333	ENSLBEG00000002516	rab5aa	93	93.333	Labrus_bergylta
ENSCGRG00001020018	-	100	93.519	ENSLACG00000004663	RAB5A	100	93.519	Latimeria_chalumnae
ENSCGRG00001020018	-	100	93.056	ENSLOCG00000006591	rab5ab	100	93.056	Lepisosteus_oculatus
ENSCGRG00001020018	-	100	97.674	ENSLAFG00000008321	RAB5A	100	97.674	Loxodonta_africana
ENSCGRG00001020018	-	100	98.140	ENSMFAG00000002326	RAB5A	100	98.140	Macaca_fascicularis
ENSCGRG00001020018	-	69	94.631	ENSMMUG00000032398	-	87	94.631	Macaca_mulatta
ENSCGRG00001020018	-	83	98.324	ENSMMUG00000006992	RAB5A	91	98.324	Macaca_mulatta
ENSCGRG00001020018	-	100	98.140	ENSMNEG00000039149	-	100	98.140	Macaca_nemestrina
ENSCGRG00001020018	-	100	98.140	ENSMLEG00000028944	RAB5A	100	98.140	Mandrillus_leucophaeus
ENSCGRG00001020018	-	100	93.056	ENSMAMG00000012573	rab5aa	100	93.056	Mastacembelus_armatus
ENSCGRG00001020018	-	100	93.056	ENSMZEG00005005205	rab5aa	100	93.056	Maylandia_zebra
ENSCGRG00001020018	-	100	95.814	ENSMGAG00000010961	RAB5A	100	95.814	Meleagris_gallopavo
ENSCGRG00001020018	-	100	99.070	ENSMAUG00000011242	-	100	99.070	Mesocricetus_auratus
ENSCGRG00001020018	-	100	98.140	ENSMICG00000049130	RAB5A	100	98.140	Microcebus_murinus
ENSCGRG00001020018	-	100	98.605	ENSMOCG00000009706	Rab5a	100	98.605	Microtus_ochrogaster
ENSCGRG00001020018	-	100	92.593	ENSMMOG00000019135	rab5aa	100	92.593	Mola_mola
ENSCGRG00001020018	-	100	97.674	ENSMODG00000014793	RAB5A	100	97.674	Monodelphis_domestica
ENSCGRG00001020018	-	100	91.667	ENSMALG00000014929	rab5aa	100	91.667	Monopterus_albus
ENSCGRG00001020018	-	100	99.070	MGP_CAROLIEiJ_G0021741	Rab5a	100	99.070	Mus_caroli
ENSCGRG00001020018	-	100	99.070	ENSMUSG00000017831	Rab5a	100	99.070	Mus_musculus
ENSCGRG00001020018	-	87	95.161	MGP_PahariEiJ_G0020730	Rab5a	99	95.161	Mus_pahari
ENSCGRG00001020018	-	100	98.140	ENSMPUG00000013147	RAB5A	100	98.140	Mustela_putorius_furo
ENSCGRG00001020018	-	100	98.140	ENSMLUG00000011716	RAB5A	100	98.140	Myotis_lucifugus
ENSCGRG00001020018	-	100	98.140	ENSNGAG00000021245	-	100	98.140	Nannospalax_galili
ENSCGRG00001020018	-	100	93.056	ENSNBRG00000011763	rab5aa	100	93.056	Neolamprologus_brichardi
ENSCGRG00001020018	-	100	98.605	ENSNLEG00000003434	RAB5A	100	98.605	Nomascus_leucogenys
ENSCGRG00001020018	-	82	98.305	ENSOPRG00000011278	RAB5A	100	98.305	Ochotona_princeps
ENSCGRG00001020018	-	87	88.421	ENSODEG00000019065	-	100	88.421	Octodon_degus
ENSCGRG00001020018	-	68	99.315	ENSODEG00000000290	-	99	99.315	Octodon_degus
ENSCGRG00001020018	-	100	93.056	ENSONIG00000002425	rab5aa	100	93.056	Oreochromis_niloticus
ENSCGRG00001020018	-	99	95.755	ENSOANG00000004989	RAB5A	97	95.755	Ornithorhynchus_anatinus
ENSCGRG00001020018	-	100	97.674	ENSOCUG00000012200	RAB5A	100	97.674	Oryctolagus_cuniculus
ENSCGRG00001020018	-	100	92.130	ENSORLG00000012261	rab5aa	100	92.130	Oryzias_latipes
ENSCGRG00001020018	-	100	92.130	ENSORLG00020020922	rab5aa	100	92.130	Oryzias_latipes_hni
ENSCGRG00001020018	-	100	92.130	ENSORLG00015012854	rab5aa	100	92.130	Oryzias_latipes_hsok
ENSCGRG00001020018	-	100	91.667	ENSORLG00015017737	rab5ab	100	91.667	Oryzias_latipes_hsok
ENSCGRG00001020018	-	100	93.056	ENSOMEG00000010692	rab5aa	100	93.056	Oryzias_melastigma
ENSCGRG00001020018	-	100	97.209	ENSOARG00000015722	RAB5A	100	97.209	Ovis_aries
ENSCGRG00001020018	-	100	97.685	ENSPPAG00000041763	RAB5A	100	97.685	Pan_paniscus
ENSCGRG00001020018	-	100	98.140	ENSPPRG00000001655	-	100	98.140	Panthera_pardus
ENSCGRG00001020018	-	100	98.140	ENSPTIG00000021685	RAB5A	100	98.140	Panthera_tigris_altaica
ENSCGRG00001020018	-	100	97.685	ENSPTRG00000014682	RAB5A	100	97.685	Pan_troglodytes
ENSCGRG00001020018	-	100	98.140	ENSPANG00000001328	RAB5A	100	98.140	Papio_anubis
ENSCGRG00001020018	-	100	93.519	ENSPKIG00000009578	rab5ab	100	93.519	Paramormyrops_kingsleyae
ENSCGRG00001020018	-	100	89.815	ENSPKIG00000010291	RAB5A	100	89.815	Paramormyrops_kingsleyae
ENSCGRG00001020018	-	100	95.349	ENSPSIG00000007157	RAB5A	100	95.349	Pelodiscus_sinensis
ENSCGRG00001020018	-	100	92.130	ENSPMGG00000001915	rab5aa	100	92.130	Periophthalmus_magnuspinnatus
ENSCGRG00001020018	-	100	97.674	ENSPCIG00000018321	RAB5A	100	97.674	Phascolarctos_cinereus
ENSCGRG00001020018	-	99	94.419	ENSPFOG00000011263	rab5aa	99	94.419	Poecilia_formosa
ENSCGRG00001020018	-	99	94.419	ENSPLAG00000017838	rab5aa	99	94.419	Poecilia_latipinna
ENSCGRG00001020018	-	99	94.419	ENSPMEG00000007238	rab5aa	99	94.419	Poecilia_mexicana
ENSCGRG00001020018	-	100	98.605	ENSPPYG00000014074	RAB5A	100	98.605	Pongo_abelii
ENSCGRG00001020018	-	100	98.140	ENSPCOG00000013289	RAB5A	100	98.140	Propithecus_coquereli
ENSCGRG00001020018	-	100	97.674	ENSPVAG00000006730	RAB5A	100	97.674	Pteropus_vampyrus
ENSCGRG00001020018	-	100	93.056	ENSPNYG00000010612	rab5aa	100	93.056	Pundamilia_nyererei
ENSCGRG00001020018	-	100	90.323	ENSPNAG00000009496	rab5ab	100	90.323	Pygocentrus_nattereri
ENSCGRG00001020018	-	100	92.130	ENSPNAG00000023223	rab5aa	100	92.130	Pygocentrus_nattereri
ENSCGRG00001020018	-	100	98.140	ENSRBIG00000036122	RAB5A	100	98.140	Rhinopithecus_bieti
ENSCGRG00001020018	-	100	98.140	ENSRROG00000037687	RAB5A	100	98.140	Rhinopithecus_roxellana
ENSCGRG00001020018	-	100	97.222	ENSSHAG00000006787	RAB5A	100	97.222	Sarcophilus_harrisii
ENSCGRG00001020018	-	98	91.943	ENSSFOG00015021115	-	98	91.943	Scleropages_formosus
ENSCGRG00001020018	-	100	93.519	ENSSFOG00015014517	rab5a	100	93.519	Scleropages_formosus
ENSCGRG00001020018	-	100	92.593	ENSSMAG00000009229	rab5aa	100	92.593	Scophthalmus_maximus
ENSCGRG00001020018	-	100	93.056	ENSSDUG00000009835	rab5aa	100	93.056	Seriola_dumerili
ENSCGRG00001020018	-	100	93.056	ENSSLDG00000011069	rab5aa	100	93.056	Seriola_lalandi_dorsalis
ENSCGRG00001020018	-	87	97.326	ENSSPUG00000001173	RAB5A	96	97.326	Sphenodon_punctatus
ENSCGRG00001020018	-	100	92.130	ENSSPAG00000015678	rab5aa	100	92.130	Stegastes_partitus
ENSCGRG00001020018	-	100	96.744	ENSSSCG00000037653	RAB5A	100	96.744	Sus_scrofa
ENSCGRG00001020018	-	100	94.884	ENSTGUG00000003236	RAB5A	100	94.884	Taeniopygia_guttata
ENSCGRG00001020018	-	99	92.093	ENSTRUG00000024368	rab5aa	99	92.093	Takifugu_rubripes
ENSCGRG00001020018	-	100	91.667	ENSTNIG00000009196	rab5aa	100	91.667	Tetraodon_nigroviridis
ENSCGRG00001020018	-	100	98.140	ENSTTRG00000001374	RAB5A	100	98.140	Tursiops_truncatus
ENSCGRG00001020018	-	100	92.140	ENSUAMG00000027471	RAB5A	99	96.721	Ursus_americanus
ENSCGRG00001020018	-	100	98.140	ENSUMAG00000018295	RAB5A	100	98.140	Ursus_maritimus
ENSCGRG00001020018	-	100	98.140	ENSVVUG00000000489	RAB5A	100	98.140	Vulpes_vulpes
ENSCGRG00001020018	-	100	93.519	ENSXETG00000002305	rab5a	100	93.519	Xenopus_tropicalis
ENSCGRG00001020018	-	99	93.953	ENSXCOG00000020121	rab5aa	99	93.953	Xiphophorus_couchianus
ENSCGRG00001020018	-	99	94.419	ENSXMAG00000028889	rab5aa	99	94.419	Xiphophorus_maculatus