EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCGRG00001020029 (Gene tree)
Gene ID: -
Gene Symbol: Tsen54
Alias: 0610034P02Rik
Full Name: tRNA splicing endonuclease subunit 54
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Plus strand
Length: 8442 bases
Position: chrscaffold_12:49060918-49069359
Accession: 1923515
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001021101	tRNA_int_end_N2	PF12928.7	1e-18	1	1
ENSCGRP00001021097	tRNA_int_end_N2	PF12928.7	1.1e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001025345	-	1458	-	ENSCGRP00001021101	485 (aa)	-	-
ENSCGRT00001025341	-	1911	-	ENSCGRP00001021097	524 (aa)	-	-

Gene Model

Click here to download ENSCGRG00001020029's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001020029's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001020029	Tsen54	100	81.939	ENSG00000182173	TSEN54	99	87.324	Homo_sapiens
ENSCGRG00001020029	Tsen54	97	46.275	ENSAPOG00000009659	tsen54	99	43.765	Acanthochromis_polyacanthus
ENSCGRG00001020029	Tsen54	99	76.604	ENSAMEG00000009414	TSEN54	99	77.170	Ailuropoda_melanoleuca
ENSCGRG00001020029	Tsen54	97	45.988	ENSAOCG00000000152	tsen54	95	45.988	Amphiprion_ocellaris
ENSCGRG00001020029	Tsen54	97	46.184	ENSAPEG00000018931	tsen54	94	46.184	Amphiprion_percula
ENSCGRG00001020029	Tsen54	97	43.570	ENSATEG00000019860	tsen54	97	44.061	Anabas_testudineus
ENSCGRG00001020029	Tsen54	86	51.410	ENSAPLG00000009419	TSEN54	100	51.410	Anas_platyrhynchos
ENSCGRG00001020029	Tsen54	99	52.444	ENSACAG00000006714	TSEN54	99	52.731	Anolis_carolinensis
ENSCGRG00001020029	Tsen54	99	82.081	ENSANAG00000024061	TSEN54	99	82.286	Aotus_nancymaae
ENSCGRG00001020029	Tsen54	97	44.788	ENSACLG00000019800	tsen54	96	44.788	Astatotilapia_calliptera
ENSCGRG00001020029	Tsen54	97	46.602	ENSAMXG00000006546	tsen54	96	46.602	Astyanax_mexicanus
ENSCGRG00001020029	Tsen54	100	79.811	ENSBTAG00000000824	TSEN54	100	80.603	Bos_taurus
ENSCGRG00001020029	Tsen54	99	80.539	ENSCJAG00000014278	TSEN54	99	80.762	Callithrix_jacchus
ENSCGRG00001020029	Tsen54	100	79.849	ENSCAFG00000004798	TSEN54	100	80.414	Canis_familiaris
ENSCGRG00001020029	Tsen54	100	79.849	ENSCAFG00020000312	TSEN54	100	80.414	Canis_lupus_dingo
ENSCGRG00001020029	Tsen54	100	80.190	ENSCHIG00000019908	TSEN54	100	80.190	Capra_hircus
ENSCGRG00001020029	Tsen54	86	76.923	ENSTSYG00000037439	TSEN54	100	77.582	Carlito_syrichta
ENSCGRG00001020029	Tsen54	99	81.118	ENSCCAG00000036624	TSEN54	99	80.952	Cebus_capucinus
ENSCGRG00001020029	Tsen54	97	82.227	ENSCATG00000042877	TSEN54	99	82.286	Cercocebus_atys
ENSCGRG00001020029	Tsen54	97	81.992	ENSCLAG00000002924	TSEN54	99	81.856	Chinchilla_lanigera
ENSCGRG00001020029	Tsen54	100	81.749	ENSCSAG00000004809	TSEN54	100	82.129	Chlorocebus_sabaeus
ENSCGRG00001020029	Tsen54	99	54.851	ENSCPBG00000028071	TSEN54	99	54.851	Chrysemys_picta_bellii
ENSCGRG00001020029	Tsen54	100	81.559	ENSCANG00000028053	TSEN54	100	81.559	Colobus_angolensis_palliatus
ENSCGRG00001020029	Tsen54	84	100.000	ENSCGRG00000016289	Tsen54	100	100.000	Cricetulus_griseus_crigri
ENSCGRG00001020029	Tsen54	80	37.915	ENSCSEG00000020586	tsen54	99	37.915	Cynoglossus_semilaevis
ENSCGRG00001020029	Tsen54	80	43.839	ENSDARG00000036844	tsen54	99	43.839	Danio_rerio
ENSCGRG00001020029	Tsen54	100	74.200	ENSDNOG00000018452	TSEN54	100	76.083	Dasypus_novemcinctus
ENSCGRG00001020029	Tsen54	100	84.190	ENSDORG00000004073	Tsen54	100	84.190	Dipodomys_ordii
ENSCGRG00001020029	Tsen54	97	36.330	ENSEBUG00000005203	TSEN54	95	36.330	Eptatretus_burgeri
ENSCGRG00001020029	Tsen54	100	79.811	ENSEASG00005000579	TSEN54	100	79.811	Equus_asinus_asinus
ENSCGRG00001020029	Tsen54	100	80.000	ENSECAG00000004924	TSEN54	100	80.000	Equus_caballus
ENSCGRG00001020029	Tsen54	86	73.304	ENSEEUG00000008467	TSEN54	100	73.742	Erinaceus_europaeus
ENSCGRG00001020029	Tsen54	97	43.253	ENSELUG00000017703	tsen54	90	44.424	Esox_lucius
ENSCGRG00001020029	Tsen54	100	80.038	ENSFCAG00000023712	TSEN54	100	80.603	Felis_catus
ENSCGRG00001020029	Tsen54	95	51.779	ENSFALG00000001119	TSEN54	97	51.638	Ficedula_albicollis
ENSCGRG00001020029	Tsen54	86	82.040	ENSFDAG00000019090	TSEN54	99	82.040	Fukomys_damarensis
ENSCGRG00001020029	Tsen54	97	47.093	ENSFHEG00000005470	tsen54	96	47.093	Fundulus_heteroclitus
ENSCGRG00001020029	Tsen54	76	45.238	ENSGMOG00000013146	tsen54	90	50.000	Gadus_morhua
ENSCGRG00001020029	Tsen54	95	48.622	ENSGALG00000047163	TSEN54	98	48.622	Gallus_gallus
ENSCGRG00001020029	Tsen54	99	45.591	ENSGAFG00000005111	tsen54	99	45.966	Gambusia_affinis
ENSCGRG00001020029	Tsen54	96	43.495	ENSGACG00000014987	tsen54	99	43.495	Gasterosteus_aculeatus
ENSCGRG00001020029	Tsen54	100	54.562	ENSGAGG00000006825	TSEN54	99	54.562	Gopherus_agassizii
ENSCGRG00001020029	Tsen54	97	81.299	ENSGGOG00000009417	TSEN54	100	81.693	Gorilla_gorilla
ENSCGRG00001020029	Tsen54	87	43.284	ENSHBUG00000018296	tsen54	98	38.028	Haplochromis_burtoni
ENSCGRG00001020029	Tsen54	100	83.429	ENSHGLG00000007979	TSEN54	100	83.429	Heterocephalus_glaber_female
ENSCGRG00001020029	Tsen54	100	82.476	ENSHGLG00100005497	TSEN54	100	82.476	Heterocephalus_glaber_male
ENSCGRG00001020029	Tsen54	80	40.793	ENSHCOG00000007481	tsen54	99	40.793	Hippocampus_comes
ENSCGRG00001020029	Tsen54	99	40.115	ENSIPUG00000000590	tsen54	98	41.075	Ictalurus_punctatus
ENSCGRG00001020029	Tsen54	100	79.238	ENSSTOG00000012883	TSEN54	100	79.238	Ictidomys_tridecemlineatus
ENSCGRG00001020029	Tsen54	100	85.389	ENSJJAG00000007365	Tsen54	100	85.389	Jaculus_jaculus
ENSCGRG00001020029	Tsen54	97	44.933	ENSKMAG00000006944	tsen54	97	44.933	Kryptolebias_marmoratus
ENSCGRG00001020029	Tsen54	97	43.050	ENSLBEG00000004199	tsen54	97	43.436	Labrus_bergylta
ENSCGRG00001020029	Tsen54	97	46.125	ENSLACG00000009497	TSEN54	100	46.125	Latimeria_chalumnae
ENSCGRG00001020029	Tsen54	99	46.507	ENSLOCG00000011191	tsen54	97	47.628	Lepisosteus_oculatus
ENSCGRG00001020029	Tsen54	100	73.823	ENSLAFG00000011655	TSEN54	100	73.823	Loxodonta_africana
ENSCGRG00001020029	Tsen54	100	81.749	ENSMFAG00000000712	TSEN54	100	82.129	Macaca_fascicularis
ENSCGRG00001020029	Tsen54	100	81.559	ENSMNEG00000029199	TSEN54	100	81.939	Macaca_nemestrina
ENSCGRG00001020029	Tsen54	86	80.531	ENSMLEG00000044168	TSEN54	88	80.973	Mandrillus_leucophaeus
ENSCGRG00001020029	Tsen54	98	44.275	ENSMAMG00000019773	tsen54	98	44.146	Mastacembelus_armatus
ENSCGRG00001020029	Tsen54	97	44.595	ENSMZEG00005000884	tsen54	96	44.595	Maylandia_zebra
ENSCGRG00001020029	Tsen54	97	48.842	ENSMGAG00000009556	TSEN54	97	48.842	Meleagris_gallopavo
ENSCGRG00001020029	Tsen54	100	94.656	ENSMAUG00000016838	Tsen54	100	94.656	Mesocricetus_auratus
ENSCGRG00001020029	Tsen54	100	78.095	ENSMICG00000044012	TSEN54	100	78.857	Microcebus_murinus
ENSCGRG00001020029	Tsen54	100	93.893	ENSMOCG00000021585	Tsen54	100	93.893	Microtus_ochrogaster
ENSCGRG00001020029	Tsen54	96	42.323	ENSMMOG00000020189	tsen54	99	43.333	Mola_mola
ENSCGRG00001020029	Tsen54	98	65.725	ENSMODG00000007438	TSEN54	98	65.677	Monodelphis_domestica
ENSCGRG00001020029	Tsen54	97	43.126	ENSMALG00000020573	tsen54	97	42.938	Monopterus_albus
ENSCGRG00001020029	Tsen54	100	88.952	MGP_CAROLIEiJ_G0017417	Tsen54	100	88.952	Mus_caroli
ENSCGRG00001020029	Tsen54	100	89.333	ENSMUSG00000020781	Tsen54	100	89.333	Mus_musculus
ENSCGRG00001020029	Tsen54	100	88.952	MGP_PahariEiJ_G0018547	Tsen54	100	88.952	Mus_pahari
ENSCGRG00001020029	Tsen54	100	89.524	MGP_SPRETEiJ_G0018262	Tsen54	100	89.524	Mus_spretus
ENSCGRG00001020029	Tsen54	100	78.531	ENSMPUG00000013870	TSEN54	100	78.908	Mustela_putorius_furo
ENSCGRG00001020029	Tsen54	100	75.141	ENSMLUG00000015298	TSEN54	100	75.706	Myotis_lucifugus
ENSCGRG00001020029	Tsen54	100	85.597	ENSNGAG00000015673	Tsen54	100	85.597	Nannospalax_galili
ENSCGRG00001020029	Tsen54	89	62.955	ENSMEUG00000011908	TSEN54	100	62.955	Notamacropus_eugenii
ENSCGRG00001020029	Tsen54	100	73.624	ENSOPRG00000012513	TSEN54	100	73.624	Ochotona_princeps
ENSCGRG00001020029	Tsen54	97	45.631	ENSONIG00000009543	tsen54	96	45.631	Oreochromis_niloticus
ENSCGRG00001020029	Tsen54	99	71.482	ENSOCUG00000009875	TSEN54	99	72.795	Oryctolagus_cuniculus
ENSCGRG00001020029	Tsen54	97	44.834	ENSORLG00000000852	tsen54	97	44.834	Oryzias_latipes
ENSCGRG00001020029	Tsen54	97	44.902	ENSORLG00020018221	tsen54	97	44.902	Oryzias_latipes_hni
ENSCGRG00001020029	Tsen54	97	44.510	ENSORLG00015009413	tsen54	98	44.510	Oryzias_latipes_hsok
ENSCGRG00001020029	Tsen54	97	44.862	ENSOMEG00000014402	tsen54	94	44.862	Oryzias_melastigma
ENSCGRG00001020029	Tsen54	100	76.426	ENSOGAG00000001442	TSEN54	100	76.426	Otolemur_garnettii
ENSCGRG00001020029	Tsen54	86	75.219	ENSOARG00000010361	TSEN54	100	76.149	Ovis_aries
ENSCGRG00001020029	Tsen54	94	81.048	ENSPPAG00000043519	TSEN54	100	81.048	Pan_paniscus
ENSCGRG00001020029	Tsen54	100	79.849	ENSPPRG00000009162	TSEN54	100	80.414	Panthera_pardus
ENSCGRG00001020029	Tsen54	86	78.761	ENSPTIG00000019312	TSEN54	96	79.204	Panthera_tigris_altaica
ENSCGRG00001020029	Tsen54	100	81.749	ENSPTRG00000009646	TSEN54	100	82.129	Pan_troglodytes
ENSCGRG00001020029	Tsen54	99	81.524	ENSPANG00000020133	TSEN54	99	81.905	Papio_anubis
ENSCGRG00001020029	Tsen54	97	45.471	ENSPKIG00000023018	tsen54	100	45.662	Paramormyrops_kingsleyae
ENSCGRG00001020029	Tsen54	80	50.465	ENSPSIG00000012807	TSEN54	99	50.465	Pelodiscus_sinensis
ENSCGRG00001020029	Tsen54	92	36.016	ENSPMGG00000019578	tsen54	99	36.016	Periophthalmus_magnuspinnatus
ENSCGRG00001020029	Tsen54	100	93.130	ENSPEMG00000014857	Tsen54	100	93.130	Peromyscus_maniculatus_bairdii
ENSCGRG00001020029	Tsen54	99	44.757	ENSPFOG00000022740	tsen54	99	45.131	Poecilia_formosa
ENSCGRG00001020029	Tsen54	99	46.168	ENSPLAG00000014847	tsen54	99	46.269	Poecilia_latipinna
ENSCGRG00001020029	Tsen54	99	44.906	ENSPMEG00000022876	tsen54	99	45.009	Poecilia_mexicana
ENSCGRG00001020029	Tsen54	99	46.067	ENSPREG00000013090	tsen54	99	46.442	Poecilia_reticulata
ENSCGRG00001020029	Tsen54	91	76.310	ENSPPYG00000008629	TSEN54	100	76.310	Pongo_abelii
ENSCGRG00001020029	Tsen54	95	67.525	ENSPCAG00000002093	TSEN54	99	67.525	Procavia_capensis
ENSCGRG00001020029	Tsen54	100	80.798	ENSPCOG00000027880	TSEN54	100	81.559	Propithecus_coquereli
ENSCGRG00001020029	Tsen54	100	80.979	ENSPVAG00000008446	TSEN54	100	80.979	Pteropus_vampyrus
ENSCGRG00001020029	Tsen54	92	44.289	ENSPNYG00000010217	tsen54	99	43.849	Pundamilia_nyererei
ENSCGRG00001020029	Tsen54	99	43.519	ENSPNAG00000003770	tsen54	98	43.519	Pygocentrus_nattereri
ENSCGRG00001020029	Tsen54	100	89.524	ENSRNOG00000004598	Tsen54	100	89.524	Rattus_norvegicus
ENSCGRG00001020029	Tsen54	100	81.749	ENSRBIG00000043040	TSEN54	100	81.749	Rhinopithecus_bieti
ENSCGRG00001020029	Tsen54	100	81.559	ENSRROG00000030797	TSEN54	100	81.559	Rhinopithecus_roxellana
ENSCGRG00001020029	Tsen54	99	78.286	ENSSBOG00000013543	TSEN54	99	78.667	Saimiri_boliviensis_boliviensis
ENSCGRG00001020029	Tsen54	99	64.673	ENSSHAG00000018127	TSEN54	98	64.673	Sarcophilus_harrisii
ENSCGRG00001020029	Tsen54	81	41.935	ENSSFOG00015004093	tsen54	100	42.166	Scleropages_formosus
ENSCGRG00001020029	Tsen54	98	42.802	ENSSMAG00000012449	tsen54	99	43.021	Scophthalmus_maximus
ENSCGRG00001020029	Tsen54	97	45.385	ENSSDUG00000021506	tsen54	97	45.385	Seriola_dumerili
ENSCGRG00001020029	Tsen54	97	45.192	ENSSLDG00000016303	tsen54	97	45.192	Seriola_lalandi_dorsalis
ENSCGRG00001020029	Tsen54	89	50.676	ENSSPUG00000008988	TSEN54	100	50.676	Sphenodon_punctatus
ENSCGRG00001020029	Tsen54	92	45.306	ENSSPAG00000008098	-	99	45.306	Stegastes_partitus
ENSCGRG00001020029	Tsen54	80	41.469	ENSSPAG00000008047	tsen54	99	41.469	Stegastes_partitus
ENSCGRG00001020029	Tsen54	100	79.096	ENSSSCG00000036852	TSEN54	100	79.661	Sus_scrofa
ENSCGRG00001020029	Tsen54	86	51.656	ENSTGUG00000008548	TSEN54	100	51.656	Taeniopygia_guttata
ENSCGRG00001020029	Tsen54	97	45.136	ENSTRUG00000004230	tsen54	96	45.331	Takifugu_rubripes
ENSCGRG00001020029	Tsen54	98	44.530	ENSTNIG00000011281	tsen54	99	44.338	Tetraodon_nigroviridis
ENSCGRG00001020029	Tsen54	86	78.821	ENSTTRG00000015828	TSEN54	100	79.258	Tursiops_truncatus
ENSCGRG00001020029	Tsen54	81	76.279	ENSUAMG00000010045	TSEN54	100	76.279	Ursus_americanus
ENSCGRG00001020029	Tsen54	84	76.180	ENSUMAG00000008979	TSEN54	100	76.854	Ursus_maritimus
ENSCGRG00001020029	Tsen54	97	79.532	ENSVVUG00000011411	TSEN54	98	80.000	Vulpes_vulpes
ENSCGRG00001020029	Tsen54	98	49.806	ENSXETG00000012532	tsen54	99	70.833	Xenopus_tropicalis
ENSCGRG00001020029	Tsen54	97	44.204	ENSXCOG00000018245	tsen54	99	44.204	Xiphophorus_couchianus
ENSCGRG00001020029	Tsen54	99	46.038	ENSXMAG00000018818	tsen54	99	46.038	Xiphophorus_maculatus