EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00001020102 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Plus strand
Length: 1764 bases
Position: chrscaffold_5:47798736-47800499
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001021178	RRM_1	PF00076.22	1.1e-29	1	2
ENSCGRP00001021178	RRM_1	PF00076.22	1.1e-29	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001025422	-	1524	-	ENSCGRP00001021178	507 (aa)	-	-

Gene Model

Click here to download ENSCGRG00001020102's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001020102's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00001020102	-	59	50.943	ENSCGRG00001014564	Syncrip	55	49.038
ENSCGRG00001020102	-	66	63.610	ENSCGRG00001017413	A1cf	58	63.610
ENSCGRG00001020102	-	60	67.508	ENSCGRG00001016714	Rbm46	67	65.300
ENSCGRG00001020102	-	58	53.226	ENSCGRG00001012007	Hnrnpr	64	45.122
ENSCGRG00001020102	-	100	94.476	ENSCGRG00001000623	-	100	94.476

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001020102	-	100	87.311	ENSG00000163694	RBM47	100	88.479	Homo_sapiens
ENSCGRG00001020102	-	100	78.780	ENSAPOG00000011062	rbm47	100	77.188	Acanthochromis_polyacanthus
ENSCGRG00001020102	-	100	68.235	ENSAMEG00000009672	RBM47	100	64.145	Ailuropoda_melanoleuca
ENSCGRG00001020102	-	100	79.310	ENSACIG00000011531	rbm47	100	77.719	Amphilophus_citrinellus
ENSCGRG00001020102	-	100	78.780	ENSAOCG00000022245	rbm47	100	77.188	Amphiprion_ocellaris
ENSCGRG00001020102	-	100	78.780	ENSAPEG00000018304	rbm47	100	77.188	Amphiprion_percula
ENSCGRG00001020102	-	100	78.005	ENSATEG00000018400	rbm47	100	76.471	Anabas_testudineus
ENSCGRG00001020102	-	100	68.475	ENSAPLG00000013974	RBM47	100	63.898	Anas_platyrhynchos
ENSCGRG00001020102	-	100	62.333	ENSACAG00000011833	RBM47	100	58.804	Anolis_carolinensis
ENSCGRG00001020102	-	100	87.879	ENSANAG00000029440	RBM47	100	88.068	Aotus_nancymaae
ENSCGRG00001020102	-	100	77.635	ENSACLG00000016902	rbm47	100	71.402	Astatotilapia_calliptera
ENSCGRG00001020102	-	100	56.126	ENSAMXG00000021794	rbm47	100	75.064	Astyanax_mexicanus
ENSCGRG00001020102	-	100	73.435	ENSBTAG00000002356	RBM47	100	64.901	Bos_taurus
ENSCGRG00001020102	-	100	87.524	ENSCJAG00000019385	RBM47	100	87.713	Callithrix_jacchus
ENSCGRG00001020102	-	96	71.178	ENSCAFG00000015898	RBM47	89	86.842	Canis_familiaris
ENSCGRG00001020102	-	81	87.736	ENSCAFG00020010558	RBM47	94	86.607	Canis_lupus_dingo
ENSCGRG00001020102	-	100	73.435	ENSCHIG00000026214	RBM47	100	64.735	Capra_hircus
ENSCGRG00001020102	-	90	70.021	ENSTSYG00000033612	RBM47	93	72.088	Carlito_syrichta
ENSCGRG00001020102	-	100	81.698	ENSCAPG00000008426	RBM47	100	80.571	Cavia_aperea
ENSCGRG00001020102	-	100	89.683	ENSCPOG00000014100	RBM47	100	87.643	Cavia_porcellus
ENSCGRG00001020102	-	99	59.484	ENSCCAG00000024397	-	99	59.116	Cebus_capucinus
ENSCGRG00001020102	-	100	87.524	ENSCCAG00000030129	-	100	87.713	Cebus_capucinus
ENSCGRG00001020102	-	100	87.500	ENSCATG00000042064	RBM47	100	87.879	Cercocebus_atys
ENSCGRG00001020102	-	100	86.857	ENSCLAG00000001684	RBM47	100	87.810	Chinchilla_lanigera
ENSCGRG00001020102	-	100	71.644	ENSCSAG00000017060	RBM47	100	65.886	Chlorocebus_sabaeus
ENSCGRG00001020102	-	77	90.274	ENSCHOG00000011731	RBM47	71	90.116	Choloepus_hoffmanni
ENSCGRG00001020102	-	100	86.508	ENSCPBG00000013831	RBM47	89	86.508	Chrysemys_picta_bellii
ENSCGRG00001020102	-	100	87.689	ENSCANG00000019997	RBM47	100	87.689	Colobus_angolensis_palliatus
ENSCGRG00001020102	-	100	99.211	ENSCGRG00000014760	-	100	99.211	Cricetulus_griseus_crigri
ENSCGRG00001020102	-	100	69.463	ENSCGRG00000007762	-	100	91.772	Cricetulus_griseus_crigri
ENSCGRG00001020102	-	100	77.573	ENSCSEG00000004545	rbm47	88	76.253	Cynoglossus_semilaevis
ENSCGRG00001020102	-	96	82.022	ENSCVAG00000020144	rbm47	100	68.692	Cyprinodon_variegatus
ENSCGRG00001020102	-	96	65.432	ENSDARG00000061985	rbm47	100	59.000	Danio_rerio
ENSCGRG00001020102	-	100	72.526	ENSDNOG00000046854	RBM47	100	64.441	Dasypus_novemcinctus
ENSCGRG00001020102	-	100	70.234	ENSDORG00000010144	Rbm47	89	87.664	Dipodomys_ordii
ENSCGRG00001020102	-	100	70.638	ENSETEG00000009194	RBM47	100	64.204	Echinops_telfairi
ENSCGRG00001020102	-	94	52.236	ENSEBUG00000011912	rbm47	95	71.552	Eptatretus_burgeri
ENSCGRG00001020102	-	100	72.758	ENSEASG00005008443	RBM47	100	64.404	Equus_asinus_asinus
ENSCGRG00001020102	-	100	72.758	ENSECAG00000004400	RBM47	100	64.404	Equus_caballus
ENSCGRG00001020102	-	71	86.147	ENSEEUG00000001194	RBM47	65	87.013	Erinaceus_europaeus
ENSCGRG00001020102	-	100	76.322	ENSELUG00000006148	rbm47	100	69.780	Esox_lucius
ENSCGRG00001020102	-	100	73.729	ENSFCAG00000012399	RBM47	100	66.105	Felis_catus
ENSCGRG00001020102	-	100	65.210	ENSFALG00000002861	RBM47	100	61.678	Ficedula_albicollis
ENSCGRG00001020102	-	100	87.037	ENSFDAG00000016326	RBM47	100	84.952	Fukomys_damarensis
ENSCGRG00001020102	-	100	78.515	ENSFHEG00000007938	rbm47	90	75.128	Fundulus_heteroclitus
ENSCGRG00001020102	-	100	74.747	ENSGMOG00000014802	rbm47	89	73.232	Gadus_morhua
ENSCGRG00001020102	-	72	86.170	ENSGALG00000014267	RBM47	99	86.170	Gallus_gallus
ENSCGRG00001020102	-	72	78.667	ENSGAFG00000020571	rbm47	98	77.067	Gambusia_affinis
ENSCGRG00001020102	-	98	78.142	ENSGACG00000016223	rbm47	100	73.537	Gasterosteus_aculeatus
ENSCGRG00001020102	-	100	86.508	ENSGAGG00000020051	RBM47	89	86.508	Gopherus_agassizii
ENSCGRG00001020102	-	100	87.500	ENSGGOG00000001367	RBM47	100	87.879	Gorilla_gorilla
ENSCGRG00001020102	-	100	77.635	ENSHBUG00000003520	rbm47	100	76.093	Haplochromis_burtoni
ENSCGRG00001020102	-	100	70.115	ENSHGLG00000016914	RBM47	100	84.810	Heterocephalus_glaber_female
ENSCGRG00001020102	-	100	73.427	ENSHGLG00100003071	-	100	73.427	Heterocephalus_glaber_male
ENSCGRG00001020102	-	99	88.564	ENSHGLG00100014028	-	100	87.763	Heterocephalus_glaber_male
ENSCGRG00001020102	-	99	70.240	ENSHCOG00000002074	rbm47	99	76.781	Hippocampus_comes
ENSCGRG00001020102	-	100	76.658	ENSIPUG00000004743	rbm47	100	75.066	Ictalurus_punctatus
ENSCGRG00001020102	-	100	86.957	ENSSTOG00000004727	RBM47	100	88.091	Ictidomys_tridecemlineatus
ENSCGRG00001020102	-	100	87.895	ENSJJAG00000013823	Rbm47	100	63.651	Jaculus_jaculus
ENSCGRG00001020102	-	100	78.364	ENSKMAG00000000084	rbm47	100	76.781	Kryptolebias_marmoratus
ENSCGRG00001020102	-	100	76.658	ENSLBEG00000008436	rbm47	100	68.670	Labrus_bergylta
ENSCGRG00001020102	-	99	81.649	ENSLACG00000007196	RBM47	88	81.649	Latimeria_chalumnae
ENSCGRG00001020102	-	100	80.902	ENSLOCG00000012966	rbm47	84	79.310	Lepisosteus_oculatus
ENSCGRG00001020102	-	100	72.806	ENSLAFG00000011998	RBM47	100	69.191	Loxodonta_africana
ENSCGRG00001020102	-	100	87.500	ENSMFAG00000037967	RBM47	100	87.879	Macaca_fascicularis
ENSCGRG00001020102	-	100	71.644	ENSMMUG00000012036	RBM47	100	88.083	Macaca_mulatta
ENSCGRG00001020102	-	100	87.879	ENSMNEG00000040774	RBM47	100	87.879	Macaca_nemestrina
ENSCGRG00001020102	-	100	90.476	ENSMLEG00000041432	RBM47	100	90.476	Mandrillus_leucophaeus
ENSCGRG00001020102	-	100	77.436	ENSMAMG00000019143	rbm47	100	70.741	Mastacembelus_armatus
ENSCGRG00001020102	-	100	77.635	ENSMZEG00005023659	rbm47	100	70.620	Maylandia_zebra
ENSCGRG00001020102	-	100	68.614	ENSMGAG00000012226	RBM47	100	61.866	Meleagris_gallopavo
ENSCGRG00001020102	-	100	92.762	ENSMAUG00000006493	Rbm47	100	92.762	Mesocricetus_auratus
ENSCGRG00001020102	-	100	79.962	ENSMICG00000026417	RBM47	100	81.298	Microcebus_murinus
ENSCGRG00001020102	-	100	92.557	ENSMOCG00000021170	Rbm47	100	92.557	Microtus_ochrogaster
ENSCGRG00001020102	-	100	75.897	ENSMMOG00000007260	rbm47	100	74.359	Mola_mola
ENSCGRG00001020102	-	59	75.949	ENSMODG00000015426	-	98	72.468	Monodelphis_domestica
ENSCGRG00001020102	-	99	80.053	ENSMODG00000020561	-	88	80.053	Monodelphis_domestica
ENSCGRG00001020102	-	100	87.566	ENSMODG00000007003	RBM47	89	87.566	Monodelphis_domestica
ENSCGRG00001020102	-	100	79.576	ENSMALG00000005167	rbm47	100	77.984	Monopterus_albus
ENSCGRG00001020102	-	100	91.969	MGP_CAROLIEiJ_G0027258	Rbm47	100	91.969	Mus_caroli
ENSCGRG00001020102	-	100	91.969	ENSMUSG00000070780	Rbm47	100	91.969	Mus_musculus
ENSCGRG00001020102	-	100	92.352	MGP_PahariEiJ_G0017040	Rbm47	100	92.352	Mus_pahari
ENSCGRG00001020102	-	100	92.514	MGP_SPRETEiJ_G0028253	Rbm47	100	91.939	Mus_spretus
ENSCGRG00001020102	-	100	69.088	ENSMPUG00000006177	RBM47	94	64.463	Mustela_putorius_furo
ENSCGRG00001020102	-	100	67.458	ENSMLUG00000000889	RBM47	89	87.599	Myotis_lucifugus
ENSCGRG00001020102	-	100	64.933	ENSNGAG00000003325	Rbm47	100	64.356	Nannospalax_galili
ENSCGRG00001020102	-	100	78.149	ENSNBRG00000015092	rbm47	100	76.607	Neolamprologus_brichardi
ENSCGRG00001020102	-	100	87.121	ENSNLEG00000017151	RBM47	100	87.500	Nomascus_leucogenys
ENSCGRG00001020102	-	68	88.579	ENSMEUG00000009516	-	83	88.579	Notamacropus_eugenii
ENSCGRG00001020102	-	85	92.562	ENSOPRG00000016507	-	73	92.562	Ochotona_princeps
ENSCGRG00001020102	-	100	88.889	ENSODEG00000004873	RBM47	100	63.967	Octodon_degus
ENSCGRG00001020102	-	100	77.296	ENSONIG00000009061	rbm47	100	75.765	Oreochromis_niloticus
ENSCGRG00001020102	-	100	69.036	ENSOANG00000008978	RBM47	100	65.990	Ornithorhynchus_anatinus
ENSCGRG00001020102	-	100	68.412	ENSOCUG00000012034	RBM47	100	63.306	Oryctolagus_cuniculus
ENSCGRG00001020102	-	100	77.984	ENSORLG00000005847	rbm47	100	76.393	Oryzias_latipes
ENSCGRG00001020102	-	100	77.984	ENSORLG00020005154	rbm47	100	76.393	Oryzias_latipes_hni
ENSCGRG00001020102	-	100	78.249	ENSORLG00015000066	rbm47	100	76.658	Oryzias_latipes_hsok
ENSCGRG00001020102	-	100	78.249	ENSOMEG00000010730	rbm47	100	76.658	Oryzias_melastigma
ENSCGRG00001020102	-	100	68.367	ENSOGAG00000025193	-	100	63.105	Otolemur_garnettii
ENSCGRG00001020102	-	100	72.007	ENSOGAG00000029367	-	100	66.779	Otolemur_garnettii
ENSCGRG00001020102	-	100	65.582	ENSOARG00000012711	RBM47	100	58.557	Ovis_aries
ENSCGRG00001020102	-	100	72.712	ENSPPAG00000029763	RBM47	95	90.426	Pan_paniscus
ENSCGRG00001020102	-	100	85.660	ENSPPRG00000012873	RBM47	100	85.468	Panthera_pardus
ENSCGRG00001020102	-	84	71.546	ENSPTIG00000017046	RBM47	100	69.753	Panthera_tigris_altaica
ENSCGRG00001020102	-	100	87.500	ENSPTRG00000016006	RBM47	100	87.879	Pan_troglodytes
ENSCGRG00001020102	-	100	87.500	ENSPANG00000005980	RBM47	100	87.879	Papio_anubis
ENSCGRG00001020102	-	96	73.161	ENSPKIG00000005037	rbm47	100	74.419	Paramormyrops_kingsleyae
ENSCGRG00001020102	-	96	74.753	ENSPKIG00000013431	RBM47	98	71.429	Paramormyrops_kingsleyae
ENSCGRG00001020102	-	88	69.318	ENSPSIG00000017516	RBM47	85	86.243	Pelodiscus_sinensis
ENSCGRG00001020102	-	100	78.249	ENSPMGG00000018540	rbm47	100	76.923	Periophthalmus_magnuspinnatus
ENSCGRG00001020102	-	100	92.190	ENSPEMG00000011088	Rbm47	100	92.190	Peromyscus_maniculatus_bairdii
ENSCGRG00001020102	-	96	81.356	ENSPFOG00000007997	rbm47	100	74.425	Poecilia_formosa
ENSCGRG00001020102	-	96	81.073	ENSPLAG00000002072	rbm47	100	74.169	Poecilia_latipinna
ENSCGRG00001020102	-	100	78.249	ENSPMEG00000017492	rbm47	100	74.425	Poecilia_mexicana
ENSCGRG00001020102	-	96	81.356	ENSPREG00000008456	rbm47	100	70.888	Poecilia_reticulata
ENSCGRG00001020102	-	98	76.965	ENSPPYG00000014688	RBM47	89	76.694	Pongo_abelii
ENSCGRG00001020102	-	87	89.710	ENSPCAG00000011879	RBM47	77	89.974	Procavia_capensis
ENSCGRG00001020102	-	100	85.057	ENSPCOG00000023451	RBM47	100	85.057	Propithecus_coquereli
ENSCGRG00001020102	-	100	70.875	ENSPVAG00000003812	RBM47	100	63.756	Pteropus_vampyrus
ENSCGRG00001020102	-	100	77.635	ENSPNYG00000022868	rbm47	100	76.093	Pundamilia_nyererei
ENSCGRG00001020102	-	100	63.333	ENSPNAG00000007940	rbm47	100	76.093	Pygocentrus_nattereri
ENSCGRG00001020102	-	100	72.542	ENSRNOG00000002408	Rbm47	100	72.542	Rattus_norvegicus
ENSCGRG00001020102	-	100	87.689	ENSRBIG00000039601	RBM47	100	87.689	Rhinopithecus_bieti
ENSCGRG00001020102	-	100	87.689	ENSRROG00000044696	RBM47	100	87.689	Rhinopithecus_roxellana
ENSCGRG00001020102	-	100	74.912	ENSSBOG00000028475	RBM47	96	90.691	Saimiri_boliviensis_boliviensis
ENSCGRG00001020102	-	100	68.074	ENSSHAG00000017576	RBM47	100	62.748	Sarcophilus_harrisii
ENSCGRG00001020102	-	100	62.162	ENSSFOG00015024101	RBM47	100	55.912	Scleropages_formosus
ENSCGRG00001020102	-	90	81.232	ENSSFOG00015012445	rbm47	100	75.773	Scleropages_formosus
ENSCGRG00001020102	-	99	75.578	ENSSMAG00000009744	rbm47	100	73.913	Scophthalmus_maximus
ENSCGRG00001020102	-	100	78.780	ENSSDUG00000022684	rbm47	100	77.188	Seriola_dumerili
ENSCGRG00001020102	-	100	79.045	ENSSLDG00000003109	rbm47	100	77.454	Seriola_lalandi_dorsalis
ENSCGRG00001020102	-	82	87.402	ENSSARG00000001735	RBM47	73	87.927	Sorex_araneus
ENSCGRG00001020102	-	100	79.924	ENSSPUG00000007515	RBM47	100	80.114	Sphenodon_punctatus
ENSCGRG00001020102	-	100	79.841	ENSSPAG00000001257	rbm47	100	78.249	Stegastes_partitus
ENSCGRG00001020102	-	100	89.122	ENSSSCG00000008796	RBM47	85	89.122	Sus_scrofa
ENSCGRG00001020102	-	100	66.667	ENSTGUG00000008705	RBM47	100	61.944	Taeniopygia_guttata
ENSCGRG00001020102	-	100	63.667	ENSTRUG00000014050	rbm47	90	76.800	Takifugu_rubripes
ENSCGRG00001020102	-	100	76.667	ENSTNIG00000006127	rbm47	89	75.128	Tetraodon_nigroviridis
ENSCGRG00001020102	-	87	89.333	ENSTBEG00000001607	RBM47	76	89.333	Tupaia_belangeri
ENSCGRG00001020102	-	100	73.254	ENSTTRG00000002839	RBM47	100	64.667	Tursiops_truncatus
ENSCGRG00001020102	-	100	71.912	ENSUAMG00000021346	RBM47	100	64.901	Ursus_americanus
ENSCGRG00001020102	-	55	85.430	ENSVPAG00000000641	-	50	84.768	Vicugna_pacos
ENSCGRG00001020102	-	96	72.183	ENSVVUG00000014774	RBM47	89	87.105	Vulpes_vulpes
ENSCGRG00001020102	-	100	80.526	ENSXETG00000012802	rbm47	92	80.688	Xenopus_tropicalis
ENSCGRG00001020102	-	100	71.537	ENSXCOG00000000780	rbm47	100	70.588	Xiphophorus_couchianus
ENSCGRG00001020102	-	100	78.515	ENSXMAG00000009874	rbm47	100	76.923	Xiphophorus_maculatus