EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCGRG00001020151 (Gene tree)
Gene ID: -
Gene Symbol: Ttc21a
Alias: 4921538N17Rik|Thm2
Full Name: tetratricopeptide repeat domain 21A
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Minus strand
Length: 29355 bases
Position: chrscaffold_5:3953359-3982713
Accession: 100756261
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001021261	PPR	PF01535.20	5.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001025505	-	3921	XM_007646435	ENSCGRP00001021261	1306 (aa)	XP_007644625	-
ENSCGRT00001025508	-	444	-	ENSCGRP00001021264	104 (aa)	-	G3HQW3

Gene Model

Click here to download ENSCGRG00001020151's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001020151's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001020151	Ttc21a	56	81.405	ENSBTAG00000010477	TTC21A	100	81.405	Bos_taurus
ENSCGRG00001020151	Ttc21a	56	82.231	ENSCHIG00000018055	TTC21A	100	82.231	Capra_hircus
ENSCGRG00001020151	Ttc21a	100	100.000	ENSCGRG00000012945	Ttc21a	95	100.000	Cricetulus_griseus_crigri
ENSCGRG00001020151	Ttc21a	100	68.855	ENSDORG00000027538	Ttc21a	99	68.855	Dipodomys_ordii
ENSCGRG00001020151	Ttc21a	88	75.529	ENSETEG00000018753	TTC21A	87	75.529	Echinops_telfairi
ENSCGRG00001020151	Ttc21a	100	82.555	ENSJJAG00000005140	Ttc21a	99	82.555	Jaculus_jaculus
ENSCGRG00001020151	Ttc21a	100	89.510	ENSMUSG00000032514	Ttc21a	99	89.510	Mus_musculus
ENSCGRG00001020151	Ttc21a	100	89.051	MGP_PahariEiJ_G0015676	Ttc21a	99	89.051	Mus_pahari
ENSCGRG00001020151	Ttc21a	100	89.587	MGP_SPRETEiJ_G0033957	Ttc21a	99	89.587	Mus_spretus
ENSCGRG00001020151	Ttc21a	100	75.421	ENSPPRG00000012924	TTC21A	99	75.421	Panthera_pardus
ENSCGRG00001020151	Ttc21a	99	92.261	ENSPEMG00000010809	Ttc21a	99	92.261	Peromyscus_maniculatus_bairdii
ENSCGRG00001020151	Ttc21a	100	90.123	ENSRNOG00000034089	Ttc21a	99	90.123	Rattus_norvegicus
ENSCGRG00001020151	Ttc21a	100	77.412	ENSUAMG00000020073	TTC21A	99	83.420	Ursus_americanus