EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00001020166 (Gene tree)
Gene ID: -
Gene Symbol: Tnrc6b
Alias: 2700090M07Rik|A730065C02Rik|D230019K20Rik
Full Name: trinucleotide repeat containing 6b
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Plus strand
Length: 216274 bases
Position: chrscaffold_0:141170758-141387031
Accession: 2443730
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001021282	Ago_hook	PF10427.9	5.2e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001025526	-	8876	-	ENSCGRP00001021282	1751 (aa)	-	-

Gene Model

Click here to download ENSCGRG00001020166's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001020166's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00001020166	Tnrc6b	94	33.978	ENSCGRG00001022686	Tnrc6c	95	34.776
ENSCGRG00001020166	Tnrc6b	97	37.911	ENSCGRG00001015021	Tnrc6a	96	36.042

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001020166	Tnrc6b	97	92.132	ENSG00000100354	TNRC6B	99	95.337	Homo_sapiens
ENSCGRG00001020166	Tnrc6b	98	90.196	ENSAMEG00000011025	TNRC6B	96	89.989	Ailuropoda_melanoleuca
ENSCGRG00001020166	Tnrc6b	96	83.571	ENSAPLG00000009347	TNRC6B	96	83.689	Anas_platyrhynchos
ENSCGRG00001020166	Tnrc6b	97	72.212	ENSACAG00000007281	TNRC6B	96	72.563	Anolis_carolinensis
ENSCGRG00001020166	Tnrc6b	97	93.673	ENSANAG00000035042	TNRC6B	94	95.286	Aotus_nancymaae
ENSCGRG00001020166	Tnrc6b	97	93.987	ENSBTAG00000021076	TNRC6B	96	94.245	Bos_taurus
ENSCGRG00001020166	Tnrc6b	95	94.869	ENSCJAG00000002732	TNRC6B	96	97.569	Callithrix_jacchus
ENSCGRG00001020166	Tnrc6b	99	95.086	ENSCAFG00000001255	TNRC6B	96	92.204	Canis_familiaris
ENSCGRG00001020166	Tnrc6b	99	94.810	ENSCAFG00020002189	TNRC6B	98	94.598	Canis_lupus_dingo
ENSCGRG00001020166	Tnrc6b	98	93.869	ENSCHIG00000003491	TNRC6B	96	94.448	Capra_hircus
ENSCGRG00001020166	Tnrc6b	97	93.934	ENSTSYG00000011836	TNRC6B	96	94.313	Carlito_syrichta
ENSCGRG00001020166	Tnrc6b	99	95.080	ENSCPOG00000005705	TNRC6B	96	95.252	Cavia_porcellus
ENSCGRG00001020166	Tnrc6b	95	93.974	ENSCCAG00000019912	TNRC6B	97	95.365	Cebus_capucinus
ENSCGRG00001020166	Tnrc6b	95	95.051	ENSCATG00000029291	TNRC6B	96	95.230	Cercocebus_atys
ENSCGRG00001020166	Tnrc6b	99	95.074	ENSCLAG00000016942	TNRC6B	96	95.189	Chinchilla_lanigera
ENSCGRG00001020166	Tnrc6b	97	91.080	ENSCSAG00000006021	TNRC6B	96	91.256	Chlorocebus_sabaeus
ENSCGRG00001020166	Tnrc6b	92	84.267	ENSCPBG00000022932	TNRC6B	99	84.327	Chrysemys_picta_bellii
ENSCGRG00001020166	Tnrc6b	95	94.812	ENSCANG00000030776	TNRC6B	95	94.828	Colobus_angolensis_palliatus
ENSCGRG00001020166	Tnrc6b	99	100.000	ENSCGRG00000016696	Tnrc6b	96	99.941	Cricetulus_griseus_crigri
ENSCGRG00001020166	Tnrc6b	99	93.493	ENSDNOG00000012744	TNRC6B	96	93.757	Dasypus_novemcinctus
ENSCGRG00001020166	Tnrc6b	99	96.048	ENSDORG00000003386	Tnrc6b	96	96.048	Dipodomys_ordii
ENSCGRG00001020166	Tnrc6b	97	82.795	ENSETEG00000006570	TNRC6B	96	83.324	Echinops_telfairi
ENSCGRG00001020166	Tnrc6b	99	95.208	ENSEASG00005005306	TNRC6B	97	94.885	Equus_asinus_asinus
ENSCGRG00001020166	Tnrc6b	99	95.371	ENSECAG00000009759	TNRC6B	98	95.376	Equus_caballus
ENSCGRG00001020166	Tnrc6b	54	95.614	ENSEEUG00000008690	-	55	95.146	Erinaceus_europaeus
ENSCGRG00001020166	Tnrc6b	99	94.923	ENSFCAG00000004791	TNRC6B	96	94.866	Felis_catus
ENSCGRG00001020166	Tnrc6b	93	86.626	ENSFALG00000012195	TNRC6B	96	86.503	Ficedula_albicollis
ENSCGRG00001020166	Tnrc6b	99	95.475	ENSFDAG00000021368	TNRC6B	96	95.590	Fukomys_damarensis
ENSCGRG00001020166	Tnrc6b	97	87.155	ENSGALG00000012050	TNRC6B	94	87.155	Gallus_gallus
ENSCGRG00001020166	Tnrc6b	97	86.308	ENSGAGG00000025188	TNRC6B	95	86.366	Gopherus_agassizii
ENSCGRG00001020166	Tnrc6b	96	94.500	ENSGGOG00000008444	TNRC6B	94	95.406	Gorilla_gorilla
ENSCGRG00001020166	Tnrc6b	99	95.369	ENSHGLG00000009306	TNRC6B	96	95.483	Heterocephalus_glaber_female
ENSCGRG00001020166	Tnrc6b	99	95.244	ENSHGLG00100018108	TNRC6B	96	95.473	Heterocephalus_glaber_male
ENSCGRG00001020166	Tnrc6b	76	46.778	ENSIPUG00000001515	tnrc6b	87	48.039	Ictalurus_punctatus
ENSCGRG00001020166	Tnrc6b	99	95.762	ENSSTOG00000008927	TNRC6B	96	95.819	Ictidomys_tridecemlineatus
ENSCGRG00001020166	Tnrc6b	99	95.757	ENSJJAG00000015779	Tnrc6b	96	95.642	Jaculus_jaculus
ENSCGRG00001020166	Tnrc6b	97	60.937	ENSLACG00000000628	-	95	61.825	Latimeria_chalumnae
ENSCGRG00001020166	Tnrc6b	75	93.664	ENSLAFG00000014473	TNRC6B	95	93.969	Loxodonta_africana
ENSCGRG00001020166	Tnrc6b	95	95.278	ENSMFAG00000003862	TNRC6B	95	95.457	Macaca_fascicularis
ENSCGRG00001020166	Tnrc6b	99	95.203	ENSMMUG00000021345	TNRC6B	99	95.334	Macaca_mulatta
ENSCGRG00001020166	Tnrc6b	96	95.083	ENSMNEG00000042745	TNRC6B	95	95.397	Macaca_nemestrina
ENSCGRG00001020166	Tnrc6b	95	95.110	ENSMLEG00000041780	TNRC6B	95	95.289	Mandrillus_leucophaeus
ENSCGRG00001020166	Tnrc6b	97	83.343	ENSMGAG00000012333	TNRC6B	96	81.746	Meleagris_gallopavo
ENSCGRG00001020166	Tnrc6b	99	97.705	ENSMAUG00000016123	Tnrc6b	96	97.705	Mesocricetus_auratus
ENSCGRG00001020166	Tnrc6b	99	92.939	ENSMICG00000014056	TNRC6B	99	91.724	Microcebus_murinus
ENSCGRG00001020166	Tnrc6b	96	99.248	ENSMOCG00000020334	Tnrc6b	96	99.248	Microtus_ochrogaster
ENSCGRG00001020166	Tnrc6b	99	97.364	MGP_CAROLIEiJ_G0020043	Tnrc6b	96	97.364	Mus_caroli
ENSCGRG00001020166	Tnrc6b	99	97.421	ENSMUSG00000047888	Tnrc6b	96	97.421	Mus_musculus
ENSCGRG00001020166	Tnrc6b	99	97.135	MGP_PahariEiJ_G0020045	Tnrc6b	96	97.135	Mus_pahari
ENSCGRG00001020166	Tnrc6b	99	97.650	MGP_SPRETEiJ_G0020941	Tnrc6b	96	97.650	Mus_spretus
ENSCGRG00001020166	Tnrc6b	94	96.514	ENSMPUG00000016442	TNRC6B	96	83.232	Mustela_putorius_furo
ENSCGRG00001020166	Tnrc6b	97	89.647	ENSMLUG00000008765	TNRC6B	96	89.495	Myotis_lucifugus
ENSCGRG00001020166	Tnrc6b	99	95.824	ENSNGAG00000021294	Tnrc6b	96	95.824	Nannospalax_galili
ENSCGRG00001020166	Tnrc6b	86	93.455	ENSNLEG00000015311	TNRC6B	93	95.647	Nomascus_leucogenys
ENSCGRG00001020166	Tnrc6b	90	84.844	ENSOPRG00000012054	TNRC6B	87	88.541	Ochotona_princeps
ENSCGRG00001020166	Tnrc6b	99	95.478	ENSODEG00000013146	TNRC6B	96	95.650	Octodon_degus
ENSCGRG00001020166	Tnrc6b	99	94.514	ENSOCUG00000016128	TNRC6B	96	94.571	Oryctolagus_cuniculus
ENSCGRG00001020166	Tnrc6b	97	90.460	ENSOGAG00000011096	TNRC6B	96	90.023	Otolemur_garnettii
ENSCGRG00001020166	Tnrc6b	99	93.970	ENSOARG00000017238	TNRC6B	96	94.084	Ovis_aries
ENSCGRG00001020166	Tnrc6b	95	95.514	ENSPPAG00000028514	TNRC6B	95	95.694	Pan_paniscus
ENSCGRG00001020166	Tnrc6b	97	91.662	ENSPPRG00000017741	TNRC6B	93	95.019	Panthera_pardus
ENSCGRG00001020166	Tnrc6b	97	86.651	ENSPTIG00000022064	TNRC6B	94	88.365	Panthera_tigris_altaica
ENSCGRG00001020166	Tnrc6b	96	94.721	ENSPTRG00000047826	TNRC6B	96	94.899	Pan_troglodytes
ENSCGRG00001020166	Tnrc6b	95	86.158	ENSPANG00000009271	TNRC6B	92	89.600	Papio_anubis
ENSCGRG00001020166	Tnrc6b	97	86.542	ENSPSIG00000005318	TNRC6B	96	86.542	Pelodiscus_sinensis
ENSCGRG00001020166	Tnrc6b	99	97.825	ENSPEMG00000011403	Tnrc6b	96	97.825	Peromyscus_maniculatus_bairdii
ENSCGRG00001020166	Tnrc6b	96	85.832	ENSPCIG00000020347	TNRC6B	95	86.128	Phascolarctos_cinereus
ENSCGRG00001020166	Tnrc6b	67	46.225	ENSPFOG00000006033	-	91	41.769	Poecilia_formosa
ENSCGRG00001020166	Tnrc6b	97	92.014	ENSPPYG00000011849	TNRC6B	95	92.366	Pongo_abelii
ENSCGRG00001020166	Tnrc6b	72	88.095	ENSPCAG00000008739	TNRC6B	72	88.828	Procavia_capensis
ENSCGRG00001020166	Tnrc6b	99	93.476	ENSPCOG00000020790	TNRC6B	99	91.924	Propithecus_coquereli
ENSCGRG00001020166	Tnrc6b	94	94.275	ENSPVAG00000004975	TNRC6B	92	94.275	Pteropus_vampyrus
ENSCGRG00001020166	Tnrc6b	66	48.232	ENSPNAG00000011713	tnrc6b	72	46.263	Pygocentrus_nattereri
ENSCGRG00001020166	Tnrc6b	100	96.366	ENSRNOG00000024907	Tnrc6b	99	96.366	Rattus_norvegicus
ENSCGRG00001020166	Tnrc6b	95	94.847	ENSRBIG00000035576	TNRC6B	95	94.194	Rhinopithecus_bieti
ENSCGRG00001020166	Tnrc6b	96	94.905	ENSRROG00000031135	TNRC6B	95	95.083	Rhinopithecus_roxellana
ENSCGRG00001020166	Tnrc6b	96	91.884	ENSSBOG00000029743	TNRC6B	93	95.134	Saimiri_boliviensis_boliviensis
ENSCGRG00001020166	Tnrc6b	97	81.448	ENSSHAG00000009692	TNRC6B	96	80.180	Sarcophilus_harrisii
ENSCGRG00001020166	Tnrc6b	63	84.746	ENSSARG00000007971	-	66	84.746	Sorex_araneus
ENSCGRG00001020166	Tnrc6b	89	81.594	ENSSPUG00000010801	TNRC6B	96	79.902	Sphenodon_punctatus
ENSCGRG00001020166	Tnrc6b	99	94.629	ENSSSCG00000000078	TNRC6B	96	94.774	Sus_scrofa
ENSCGRG00001020166	Tnrc6b	94	83.293	ENSTGUG00000010138	-	99	83.172	Taeniopygia_guttata
ENSCGRG00001020166	Tnrc6b	99	88.857	ENSTTRG00000011465	TNRC6B	96	88.914	Tursiops_truncatus
ENSCGRG00001020166	Tnrc6b	99	93.764	ENSUAMG00000007174	TNRC6B	96	93.356	Ursus_americanus
ENSCGRG00001020166	Tnrc6b	96	94.843	ENSUMAG00000014336	TNRC6B	96	94.717	Ursus_maritimus
ENSCGRG00001020166	Tnrc6b	71	89.516	ENSVPAG00000001467	TNRC6B	75	88.306	Vicugna_pacos
ENSCGRG00001020166	Tnrc6b	99	95.086	ENSVVUG00000007064	TNRC6B	96	95.197	Vulpes_vulpes