EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00001020525 (Gene tree)
Gene ID: -
Gene Symbol: Hnrnpu
Alias: Hnrpu|Sp120|scaffold attachment factor A
Full Name: heterogeneous nuclear ribonucleoprotein U
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Plus strand
Length: 8711 bases
Position: chrscaffold_1:15574616-15583326
Accession: 1858195
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001021804	SAP	PF02037.27	1.6e-10	1	1
ENSCGRP00001021790	SAP	PF02037.27	1.6e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001026034	-	2465	-	ENSCGRP00001021790	798 (aa)	-	-
ENSCGRT00001026048	-	2448	-	ENSCGRP00001021804	815 (aa)	-	-

Gene Model

Click here to download ENSCGRG00001020525's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001020525's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00001020525	Hnrnpu	63	54.183	ENSCGRG00001015368	Hnrnpul1	61	51.646

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001020525	Hnrnpu	100	96.030	ENSG00000153187	HNRNPU	100	100.000	Homo_sapiens
ENSCGRG00001020525	Hnrnpu	99	50.407	ENSAPOG00000017400	hnrnpub	84	57.997	Acanthochromis_polyacanthus
ENSCGRG00001020525	Hnrnpu	100	92.570	ENSAMEG00000009145	HNRNPU	100	93.301	Ailuropoda_melanoleuca
ENSCGRG00001020525	Hnrnpu	83	60.132	ENSACIG00000012138	hnrnpub	88	80.851	Amphilophus_citrinellus
ENSCGRG00001020525	Hnrnpu	99	50.640	ENSAOCG00000015843	hnrnpub	83	58.146	Amphiprion_ocellaris
ENSCGRG00001020525	Hnrnpu	99	50.640	ENSAPEG00000014679	hnrnpub	83	58.146	Amphiprion_percula
ENSCGRG00001020525	Hnrnpu	71	83.721	ENSATEG00000016178	hnrnpub	92	53.545	Anabas_testudineus
ENSCGRG00001020525	Hnrnpu	81	83.929	ENSACAG00000004511	HNRNPU	100	74.970	Anolis_carolinensis
ENSCGRG00001020525	Hnrnpu	100	96.130	ENSANAG00000033895	-	99	98.684	Aotus_nancymaae
ENSCGRG00001020525	Hnrnpu	77	78.723	ENSACLG00000008165	hnrnpub	86	78.723	Astatotilapia_calliptera
ENSCGRG00001020525	Hnrnpu	100	94.303	ENSBTAG00000007606	HNRNPU	100	94.909	Bos_taurus
ENSCGRG00001020525	Hnrnpu	100	93.818	ENSCJAG00000016914	HNRNPU	99	98.496	Callithrix_jacchus
ENSCGRG00001020525	Hnrnpu	100	96.278	ENSCAFG00020000918	HNRNPU	100	96.278	Canis_lupus_dingo
ENSCGRG00001020525	Hnrnpu	100	96.278	ENSCHIG00000004900	HNRNPU	100	96.278	Capra_hircus
ENSCGRG00001020525	Hnrnpu	100	94.526	ENSCPOG00000011887	HNRNPU	100	95.499	Cavia_porcellus
ENSCGRG00001020525	Hnrnpu	100	96.130	ENSCCAG00000037859	-	99	98.496	Cebus_capucinus
ENSCGRG00001020525	Hnrnpu	100	96.380	ENSCATG00000035273	HNRNPU	99	98.684	Cercocebus_atys
ENSCGRG00001020525	Hnrnpu	100	94.769	ENSCLAG00000007100	HNRNPU	100	95.742	Chinchilla_lanigera
ENSCGRG00001020525	Hnrnpu	100	95.906	ENSCSAG00000009219	HNRNPU	100	95.906	Chlorocebus_sabaeus
ENSCGRG00001020525	Hnrnpu	81	93.333	ENSCHOG00000001387	HNRNPU	79	93.333	Choloepus_hoffmanni
ENSCGRG00001020525	Hnrnpu	100	79.142	ENSCPBG00000009415	HNRNPU	98	81.000	Chrysemys_picta_bellii
ENSCGRG00001020525	Hnrnpu	100	93.508	ENSCANG00000022780	HNRNPU	100	94.132	Colobus_angolensis_palliatus
ENSCGRG00001020525	Hnrnpu	81	83.721	ENSCSEG00000010804	hnrnpub	98	58.750	Cynoglossus_semilaevis
ENSCGRG00001020525	Hnrnpu	81	71.429	ENSCVAG00000004280	hnrnpub	85	71.429	Cyprinodon_variegatus
ENSCGRG00001020525	Hnrnpu	83	61.715	ENSDARG00000004735	hnrnpub	93	59.299	Danio_rerio
ENSCGRG00001020525	Hnrnpu	81	64.706	ENSDARG00000015206	hnrnpua	92	59.098	Danio_rerio
ENSCGRG00001020525	Hnrnpu	83	99.328	ENSDNOG00000000215	HNRNPU	91	97.222	Dasypus_novemcinctus
ENSCGRG00001020525	Hnrnpu	100	93.134	ENSDORG00000015491	Hnrnpu	100	93.258	Dipodomys_ordii
ENSCGRG00001020525	Hnrnpu	100	91.687	ENSETEG00000014565	HNRNPU	100	91.191	Echinops_telfairi
ENSCGRG00001020525	Hnrnpu	100	96.402	ENSEASG00005003017	HNRNPU	100	96.402	Equus_asinus_asinus
ENSCGRG00001020525	Hnrnpu	100	96.278	ENSECAG00000007955	HNRNPU	100	96.278	Equus_caballus
ENSCGRG00001020525	Hnrnpu	99	51.111	ENSELUG00000011966	hnrnpua	64	81.395	Esox_lucius
ENSCGRG00001020525	Hnrnpu	76	57.347	ENSELUG00000010733	hnrnpub	82	56.842	Esox_lucius
ENSCGRG00001020525	Hnrnpu	100	96.025	ENSFCAG00000002156	HNRNPU	99	98.496	Felis_catus
ENSCGRG00001020525	Hnrnpu	83	98.990	ENSFDAG00000006026	HNRNPU	100	98.990	Fukomys_damarensis
ENSCGRG00001020525	Hnrnpu	78	69.643	ENSFHEG00000022639	hnrnpub	69	69.643	Fundulus_heteroclitus
ENSCGRG00001020525	Hnrnpu	75	58.560	ENSGMOG00000001755	hnrnpub	99	53.098	Gadus_morhua
ENSCGRG00001020525	Hnrnpu	100	78.066	ENSGALG00000010671	HNRNPU	100	78.404	Gallus_gallus
ENSCGRG00001020525	Hnrnpu	60	83.721	ENSGAFG00000009369	hnrnpub	99	50.287	Gambusia_affinis
ENSCGRG00001020525	Hnrnpu	79	58.841	ENSGACG00000004679	hnrnpub	99	50.059	Gasterosteus_aculeatus
ENSCGRG00001020525	Hnrnpu	100	96.255	ENSGGOG00000004061	HNRNPU	99	98.872	Gorilla_gorilla
ENSCGRG00001020525	Hnrnpu	77	78.723	ENSHBUG00000012290	hnrnpub	86	78.723	Haplochromis_burtoni
ENSCGRG00001020525	Hnrnpu	100	96.638	ENSHGLG00000010594	-	100	96.638	Heterocephalus_glaber_female
ENSCGRG00001020525	Hnrnpu	82	99.328	ENSHGLG00100015093	HNRNPU	100	99.328	Heterocephalus_glaber_male
ENSCGRG00001020525	Hnrnpu	80	83.333	ENSHCOG00000020091	hnrnpub	84	74.000	Hippocampus_comes
ENSCGRG00001020525	Hnrnpu	77	83.721	ENSIPUG00000007749	hnrnpu	92	68.421	Ictalurus_punctatus
ENSCGRG00001020525	Hnrnpu	100	94.512	ENSJJAG00000011371	Hnrnpu	100	95.366	Jaculus_jaculus
ENSCGRG00001020525	Hnrnpu	77	83.721	ENSKMAG00000004532	hnrnpub	89	59.459	Kryptolebias_marmoratus
ENSCGRG00001020525	Hnrnpu	76	56.213	ENSLBEG00000022520	hnrnpub	82	56.140	Labrus_bergylta
ENSCGRG00001020525	Hnrnpu	99	61.993	ENSLACG00000017463	HNRNPU	99	62.313	Latimeria_chalumnae
ENSCGRG00001020525	Hnrnpu	78	86.047	ENSLOCG00000016652	hnrnpua	82	86.047	Lepisosteus_oculatus
ENSCGRG00001020525	Hnrnpu	100	95.506	ENSLAFG00000021377	HNRNPU	100	94.881	Loxodonta_africana
ENSCGRG00001020525	Hnrnpu	100	96.380	ENSMFAG00000037308	HNRNPU	99	98.684	Macaca_fascicularis
ENSCGRG00001020525	Hnrnpu	100	96.504	ENSMMUG00000021098	HNRNPU	100	96.504	Macaca_mulatta
ENSCGRG00001020525	Hnrnpu	100	96.380	ENSMNEG00000043645	HNRNPU	99	98.684	Macaca_nemestrina
ENSCGRG00001020525	Hnrnpu	77	78.723	ENSMZEG00005003185	hnrnpub	86	78.723	Maylandia_zebra
ENSCGRG00001020525	Hnrnpu	100	99.374	ENSMAUG00000008842	Hnrnpu	100	99.374	Mesocricetus_auratus
ENSCGRG00001020525	Hnrnpu	100	96.504	ENSMICG00000004616	HNRNPU	99	99.060	Microcebus_murinus
ENSCGRG00001020525	Hnrnpu	100	99.373	ENSMOCG00000015623	Hnrnpu	100	99.373	Microtus_ochrogaster
ENSCGRG00001020525	Hnrnpu	100	88.353	ENSMODG00000006515	HNRNPU	100	89.059	Monodelphis_domestica
ENSCGRG00001020525	Hnrnpu	74	83.721	ENSMALG00000018243	hnrnpub	72	61.800	Monopterus_albus
ENSCGRG00001020525	Hnrnpu	100	98.750	MGP_CAROLIEiJ_G0014962	Hnrnpu	100	98.750	Mus_caroli
ENSCGRG00001020525	Hnrnpu	100	98.875	ENSMUSG00000039630	Hnrnpu	100	98.875	Mus_musculus
ENSCGRG00001020525	Hnrnpu	100	98.127	MGP_PahariEiJ_G0028193	Hnrnpu	100	98.127	Mus_pahari
ENSCGRG00001020525	Hnrnpu	100	98.875	MGP_SPRETEiJ_G0015761	Hnrnpu	100	98.875	Mus_spretus
ENSCGRG00001020525	Hnrnpu	100	88.286	ENSMLUG00000000475	HNRNPU	100	87.531	Myotis_lucifugus
ENSCGRG00001020525	Hnrnpu	100	97.997	ENSNGAG00000019075	Hnrnpu	100	97.997	Nannospalax_galili
ENSCGRG00001020525	Hnrnpu	77	78.723	ENSNBRG00000017855	hnrnpub	86	78.723	Neolamprologus_brichardi
ENSCGRG00001020525	Hnrnpu	99	85.145	ENSMEUG00000000541	HNRNPU	99	85.784	Notamacropus_eugenii
ENSCGRG00001020525	Hnrnpu	70	95.588	ENSODEG00000014458	-	100	95.588	Octodon_degus
ENSCGRG00001020525	Hnrnpu	82	78.723	ENSONIG00000001260	hnrnpub	92	78.723	Oreochromis_niloticus
ENSCGRG00001020525	Hnrnpu	98	94.059	ENSOCUG00000014469	HNRNPU	93	93.936	Oryctolagus_cuniculus
ENSCGRG00001020525	Hnrnpu	81	83.721	ENSORLG00020005363	hnrnpub	88	83.721	Oryzias_latipes_hni
ENSCGRG00001020525	Hnrnpu	81	83.721	ENSORLG00015001190	hnrnpub	88	83.721	Oryzias_latipes_hsok
ENSCGRG00001020525	Hnrnpu	81	83.721	ENSOMEG00000014951	hnrnpub	89	83.721	Oryzias_melastigma
ENSCGRG00001020525	Hnrnpu	100	96.154	ENSOGAG00000014024	HNRNPU	100	96.154	Otolemur_garnettii
ENSCGRG00001020525	Hnrnpu	83	98.660	ENSOARG00000004985	HNRNPU	91	98.660	Ovis_aries
ENSCGRG00001020525	Hnrnpu	100	96.504	ENSPPAG00000038652	HNRNPU	99	98.872	Pan_paniscus
ENSCGRG00001020525	Hnrnpu	100	93.697	ENSPPRG00000002662	HNRNPU	99	98.496	Panthera_pardus
ENSCGRG00001020525	Hnrnpu	100	96.504	ENSPTRG00000002182	HNRNPU	99	98.872	Pan_troglodytes
ENSCGRG00001020525	Hnrnpu	100	96.380	ENSPANG00000011643	HNRNPU	99	98.684	Papio_anubis
ENSCGRG00001020525	Hnrnpu	99	55.349	ENSPKIG00000006885	hnrnpua	99	56.695	Paramormyrops_kingsleyae
ENSCGRG00001020525	Hnrnpu	87	65.831	ENSPKIG00000022332	hnrnpub	84	83.721	Paramormyrops_kingsleyae
ENSCGRG00001020525	Hnrnpu	100	89.976	ENSPCIG00000008657	HNRNPU	100	90.573	Phascolarctos_cinereus
ENSCGRG00001020525	Hnrnpu	62	66.219	ENSPFOG00000002908	hnrnpub	89	60.000	Poecilia_formosa
ENSCGRG00001020525	Hnrnpu	79	65.079	ENSPLAG00000004160	hnrnpub	89	60.000	Poecilia_latipinna
ENSCGRG00001020525	Hnrnpu	100	90.943	ENSPCOG00000003883	-	100	91.563	Propithecus_coquereli
ENSCGRG00001020525	Hnrnpu	100	94.894	ENSPCOG00000018655	-	99	98.872	Propithecus_coquereli
ENSCGRG00001020525	Hnrnpu	100	93.939	ENSPVAG00000002581	HNRNPU	100	94.667	Pteropus_vampyrus
ENSCGRG00001020525	Hnrnpu	77	78.723	ENSPNYG00000021642	hnrnpub	86	78.723	Pundamilia_nyererei
ENSCGRG00001020525	Hnrnpu	99	56.434	ENSPNAG00000001055	hnrnpub	81	62.957	Pygocentrus_nattereri
ENSCGRG00001020525	Hnrnpu	100	98.872	ENSRNOG00000033790	Hnrnpu	100	98.872	Rattus_norvegicus
ENSCGRG00001020525	Hnrnpu	100	95.880	ENSRBIG00000031519	HNRNPU	100	95.880	Rhinopithecus_bieti
ENSCGRG00001020525	Hnrnpu	100	96.154	ENSRROG00000041642	HNRNPU	100	96.154	Rhinopithecus_roxellana
ENSCGRG00001020525	Hnrnpu	94	60.236	ENSSFOG00015019004	hnrnpu	98	59.236	Scleropages_formosus
ENSCGRG00001020525	Hnrnpu	99	58.076	ENSSFOG00015001124	hnrnpub	79	63.554	Scleropages_formosus
ENSCGRG00001020525	Hnrnpu	70	61.336	ENSSMAG00000003607	hnrnpub	80	53.451	Scophthalmus_maximus
ENSCGRG00001020525	Hnrnpu	77	83.721	ENSSDUG00000005912	hnrnpub	81	55.507	Seriola_dumerili
ENSCGRG00001020525	Hnrnpu	76	54.876	ENSSLDG00000004899	hnrnpub	81	55.362	Seriola_lalandi_dorsalis
ENSCGRG00001020525	Hnrnpu	100	77.844	ENSSPUG00000011393	HNRNPU	100	79.543	Sphenodon_punctatus
ENSCGRG00001020525	Hnrnpu	75	62.454	ENSSPAG00000011853	hnrnpub	83	55.669	Stegastes_partitus
ENSCGRG00001020525	Hnrnpu	100	96.030	ENSSSCG00000010877	HNRNPU	100	96.030	Sus_scrofa
ENSCGRG00001020525	Hnrnpu	73	79.070	ENSTRUG00000007759	hnrnpub	84	79.070	Takifugu_rubripes
ENSCGRG00001020525	Hnrnpu	81	76.744	ENSTNIG00000009725	hnrnpub	95	76.744	Tetraodon_nigroviridis
ENSCGRG00001020525	Hnrnpu	71	100.000	ENSTTRG00000005281	HNRNPU	71	100.000	Tursiops_truncatus
ENSCGRG00001020525	Hnrnpu	100	94.061	ENSUAMG00000021120	HNRNPU	99	98.872	Ursus_americanus
ENSCGRG00001020525	Hnrnpu	99	85.264	ENSUMAG00000012322	HNRNPU	97	94.840	Ursus_maritimus
ENSCGRG00001020525	Hnrnpu	80	92.669	ENSVPAG00000010520	HNRNPU	91	92.669	Vicugna_pacos
ENSCGRG00001020525	Hnrnpu	100	96.278	ENSVVUG00000026524	HNRNPU	100	96.278	Vulpes_vulpes
ENSCGRG00001020525	Hnrnpu	99	66.307	ENSXETG00000011386	hnrnpu	99	69.767	Xenopus_tropicalis
ENSCGRG00001020525	Hnrnpu	77	83.721	ENSXMAG00000010356	hnrnpub	89	58.667	Xiphophorus_maculatus