EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00001020605 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Minus strand
Length: 50727 bases
Position: chrscaffold_6:72706121-72756847
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001021907	zf-CCHC	PF00098.23	6.6e-14	1	3
ENSCGRP00001021907	zf-CCHC	PF00098.23	6.6e-14	2	3
ENSCGRP00001021907	zf-CCHC	PF00098.23	6.6e-14	3	3
ENSCGRP00001021907	PAP_assoc	PF03828.19	4.3e-28	1	2
ENSCGRP00001021907	PAP_assoc	PF03828.19	4.3e-28	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001026151	-	4395	-	ENSCGRP00001021907	1464 (aa)	-	-

Gene Model

Click here to download ENSCGRG00001020605's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001020605's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00001020605	-	62	63.048	ENSCGRG00001020315	-	59	55.214

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001020605	-	91	93.233	ENSG00000083223	TUT7	98	92.840	Homo_sapiens
ENSCGRG00001020605	-	62	72.500	ENSAPOG00000012979	TUT7	80	72.500	Acanthochromis_polyacanthus
ENSCGRG00001020605	-	99	77.830	ENSAMEG00000004148	TUT7	99	78.032	Ailuropoda_melanoleuca
ENSCGRG00001020605	-	69	64.398	ENSAOCG00000004223	-	90	52.920	Amphiprion_ocellaris
ENSCGRG00001020605	-	99	60.652	ENSAPLG00000015510	TUT7	99	60.600	Anas_platyrhynchos
ENSCGRG00001020605	-	58	82.957	ENSACAG00000000279	TUT7	88	76.906	Anolis_carolinensis
ENSCGRG00001020605	-	91	93.734	ENSANAG00000025848	TUT7	98	93.333	Aotus_nancymaae
ENSCGRG00001020605	-	66	70.270	ENSACLG00000018198	TUT7	78	70.270	Astatotilapia_calliptera
ENSCGRG00001020605	-	99	77.454	ENSBTAG00000001737	TUT7	99	77.680	Bos_taurus
ENSCGRG00001020605	-	91	93.484	ENSCJAG00000001845	TUT7	98	93.086	Callithrix_jacchus
ENSCGRG00001020605	-	99	78.190	ENSCAFG00000001331	TUT7	99	78.235	Canis_familiaris
ENSCGRG00001020605	-	99	78.205	ENSCAFG00020023620	TUT7	99	78.340	Canis_lupus_dingo
ENSCGRG00001020605	-	100	77.860	ENSCHIG00000017690	TUT7	100	77.860	Capra_hircus
ENSCGRG00001020605	-	91	92.840	ENSTSYG00000008907	TUT7	98	92.840	Carlito_syrichta
ENSCGRG00001020605	-	99	74.882	ENSCPOG00000002500	TUT7	96	74.814	Cavia_porcellus
ENSCGRG00001020605	-	91	93.734	ENSCATG00000032888	TUT7	98	93.333	Cercocebus_atys
ENSCGRG00001020605	-	99	75.574	ENSCLAG00000007535	TUT7	99	75.236	Chinchilla_lanigera
ENSCGRG00001020605	-	99	79.108	ENSCSAG00000007408	TUT7	99	79.057	Chlorocebus_sabaeus
ENSCGRG00001020605	-	99	72.379	ENSCHOG00000011129	TUT7	99	72.446	Choloepus_hoffmanni
ENSCGRG00001020605	-	99	62.956	ENSCPBG00000005272	TUT7	96	63.054	Chrysemys_picta_bellii
ENSCGRG00001020605	-	91	93.484	ENSCANG00000035790	TUT7	98	93.086	Colobus_angolensis_palliatus
ENSCGRG00001020605	-	99	96.068	ENSCGRG00000016585	-	96	96.068	Cricetulus_griseus_crigri
ENSCGRG00001020605	-	65	65.957	ENSCSEG00000007068	TUT7	82	65.957	Cynoglossus_semilaevis
ENSCGRG00001020605	-	67	56.656	ENSCVAG00000012526	-	84	56.250	Cyprinodon_variegatus
ENSCGRG00001020605	-	60	63.918	ENSDARG00000074645	CABZ01032476.1	73	63.918	Danio_rerio
ENSCGRG00001020605	-	99	77.313	ENSDNOG00000010663	TUT7	95	85.243	Dasypus_novemcinctus
ENSCGRG00001020605	-	76	77.530	ENSDORG00000009046	-	92	83.417	Dipodomys_ordii
ENSCGRG00001020605	-	81	82.181	ENSETEG00000007739	TUT7	86	81.723	Echinops_telfairi
ENSCGRG00001020605	-	99	78.990	ENSEASG00005020165	TUT7	99	79.057	Equus_asinus_asinus
ENSCGRG00001020605	-	100	78.898	ENSECAG00000014831	TUT7	100	78.965	Equus_caballus
ENSCGRG00001020605	-	99	66.667	ENSEEUG00000012794	TUT7	100	66.599	Erinaceus_europaeus
ENSCGRG00001020605	-	69	61.224	ENSELUG00000013049	-	93	52.980	Esox_lucius
ENSCGRG00001020605	-	92	92.840	ENSFCAG00000003491	TUT7	98	92.840	Felis_catus
ENSCGRG00001020605	-	99	59.079	ENSFALG00000003541	TUT7	99	58.554	Ficedula_albicollis
ENSCGRG00001020605	-	99	76.518	ENSFDAG00000002315	TUT7	96	76.518	Fukomys_damarensis
ENSCGRG00001020605	-	61	62.664	ENSFHEG00000004770	-	82	56.866	Fundulus_heteroclitus
ENSCGRG00001020605	-	59	74.641	ENSGMOG00000001464	-	79	74.940	Gadus_morhua
ENSCGRG00001020605	-	99	59.894	ENSGALG00000012607	ZCCHC6	96	59.881	Gallus_gallus
ENSCGRG00001020605	-	56	60.194	ENSGAFG00000017141	-	68	50.327	Gambusia_affinis
ENSCGRG00001020605	-	65	65.047	ENSGACG00000004735	TUT7	92	66.535	Gasterosteus_aculeatus
ENSCGRG00001020605	-	99	61.189	ENSGAGG00000013087	TUT7	99	61.137	Gopherus_agassizii
ENSCGRG00001020605	-	91	93.484	ENSGGOG00000007523	ZCCHC6	98	93.086	Gorilla_gorilla
ENSCGRG00001020605	-	99	76.714	ENSHGLG00000018427	TUT7	99	76.818	Heterocephalus_glaber_female
ENSCGRG00001020605	-	99	76.646	ENSHGLG00100004701	TUT7	99	76.751	Heterocephalus_glaber_male
ENSCGRG00001020605	-	100	80.473	ENSSTOG00000000586	TUT7	100	80.270	Ictidomys_tridecemlineatus
ENSCGRG00001020605	-	81	76.975	ENSJJAG00000000106	-	94	83.127	Jaculus_jaculus
ENSCGRG00001020605	-	54	65.072	ENSLBEG00000015545	-	75	53.074	Labrus_bergylta
ENSCGRG00001020605	-	99	55.505	ENSLACG00000001637	TUT7	96	55.987	Latimeria_chalumnae
ENSCGRG00001020605	-	99	51.305	ENSLOCG00000002472	TUT7	99	50.751	Lepisosteus_oculatus
ENSCGRG00001020605	-	81	73.749	ENSLAFG00000007884	TUT7	100	72.647	Loxodonta_africana
ENSCGRG00001020605	-	91	93.484	ENSMFAG00000000971	TUT7	98	93.086	Macaca_fascicularis
ENSCGRG00001020605	-	91	93.734	ENSMMUG00000003401	TUT7	98	93.333	Macaca_mulatta
ENSCGRG00001020605	-	91	93.734	ENSMNEG00000031427	TUT7	98	93.333	Macaca_nemestrina
ENSCGRG00001020605	-	91	93.734	ENSMLEG00000027049	TUT7	98	93.333	Mandrillus_leucophaeus
ENSCGRG00001020605	-	60	66.473	ENSMAMG00000011815	TUT7	95	54.613	Mastacembelus_armatus
ENSCGRG00001020605	-	66	70.270	ENSMZEG00005012809	TUT7	79	70.270	Maylandia_zebra
ENSCGRG00001020605	-	99	55.920	ENSMGAG00000006542	TUT7	98	56.120	Meleagris_gallopavo
ENSCGRG00001020605	-	99	87.543	ENSMAUG00000006963	-	99	87.543	Mesocricetus_auratus
ENSCGRG00001020605	-	90	94.321	ENSMICG00000016944	TUT7	98	94.321	Microcebus_murinus
ENSCGRG00001020605	-	75	86.640	ENSMOCG00000007812	-	97	86.775	Microtus_ochrogaster
ENSCGRG00001020605	-	99	63.558	ENSMODG00000003542	TUT7	97	63.841	Monodelphis_domestica
ENSCGRG00001020605	-	62	62.186	ENSMALG00000000634	TUT7	90	54.847	Monopterus_albus
ENSCGRG00001020605	-	99	86.216	MGP_CAROLIEiJ_G0018612	-	96	86.284	Mus_caroli
ENSCGRG00001020605	-	100	86.527	ENSMUSG00000035248	Tut7	100	86.594	Mus_musculus
ENSCGRG00001020605	-	100	85.377	MGP_PahariEiJ_G0019676	-	100	85.445	Mus_pahari
ENSCGRG00001020605	-	100	86.518	MGP_SPRETEiJ_G0019491	-	100	86.721	Mus_spretus
ENSCGRG00001020605	-	99	77.395	ENSMPUG00000002191	TUT7	96	77.598	Mustela_putorius_furo
ENSCGRG00001020605	-	99	76.804	ENSMLUG00000001298	TUT7	99	76.601	Myotis_lucifugus
ENSCGRG00001020605	-	77	80.260	ENSNGAG00000022758	-	94	84.236	Nannospalax_galili
ENSCGRG00001020605	-	65	70.270	ENSNBRG00000021961	TUT7	79	70.270	Neolamprologus_brichardi
ENSCGRG00001020605	-	91	93.233	ENSNLEG00000005138	TUT7	98	92.840	Nomascus_leucogenys
ENSCGRG00001020605	-	81	70.861	ENSMEUG00000006540	TUT7	79	70.861	Notamacropus_eugenii
ENSCGRG00001020605	-	99	81.627	ENSOPRG00000002893	TUT7	88	81.627	Ochotona_princeps
ENSCGRG00001020605	-	72	78.094	ENSODEG00000006904	-	92	82.134	Octodon_degus
ENSCGRG00001020605	-	65	64.922	ENSONIG00000017001	TUT7	86	66.089	Oreochromis_niloticus
ENSCGRG00001020605	-	99	77.495	ENSOCUG00000010949	TUT7	94	77.495	Oryctolagus_cuniculus
ENSCGRG00001020605	-	65	47.031	ENSORLG00000001714	-	97	44.730	Oryzias_latipes
ENSCGRG00001020605	-	65	50.698	ENSORLG00020007882	-	81	51.360	Oryzias_latipes_hni
ENSCGRG00001020605	-	57	46.250	ENSORLG00015017233	-	81	46.774	Oryzias_latipes_hsok
ENSCGRG00001020605	-	62	60.917	ENSOMEG00000015528	-	83	52.405	Oryzias_melastigma
ENSCGRG00001020605	-	99	79.136	ENSOGAG00000015630	TUT7	99	79.068	Otolemur_garnettii
ENSCGRG00001020605	-	99	77.530	ENSOARG00000008732	TUT7	96	77.800	Ovis_aries
ENSCGRG00001020605	-	91	93.484	ENSPPAG00000038548	TUT7	98	93.086	Pan_paniscus
ENSCGRG00001020605	-	92	93.333	ENSPPRG00000011084	TUT7	98	93.333	Panthera_pardus
ENSCGRG00001020605	-	92	93.333	ENSPTIG00000007881	TUT7	98	93.333	Panthera_tigris_altaica
ENSCGRG00001020605	-	91	93.484	ENSPTRG00000021076	TUT7	98	93.086	Pan_troglodytes
ENSCGRG00001020605	-	99	76.897	ENSPANG00000024890	TUT7	95	84.746	Papio_anubis
ENSCGRG00001020605	-	99	62.012	ENSPSIG00000003600	TUT7	96	61.936	Pelodiscus_sinensis
ENSCGRG00001020605	-	99	89.878	ENSPEMG00000014030	-	99	90.082	Peromyscus_maniculatus_bairdii
ENSCGRG00001020605	-	99	64.592	ENSPCIG00000018302	TUT7	99	65.197	Phascolarctos_cinereus
ENSCGRG00001020605	-	61	73.576	ENSPFOG00000011606	-	82	73.198	Poecilia_formosa
ENSCGRG00001020605	-	61	64.773	ENSPLAG00000006121	TUT7	96	56.186	Poecilia_latipinna
ENSCGRG00001020605	-	62	63.822	ENSPREG00000009118	TUT7	87	63.043	Poecilia_reticulata
ENSCGRG00001020605	-	100	79.960	ENSPPYG00000019340	TUT7	100	79.960	Pongo_abelii
ENSCGRG00001020605	-	70	87.364	ENSPCAG00000011630	TUT7	65	87.097	Procavia_capensis
ENSCGRG00001020605	-	91	94.321	ENSPCOG00000023407	TUT7	98	94.321	Propithecus_coquereli
ENSCGRG00001020605	-	91	72.396	ENSPVAG00000004589	TUT7	99	72.321	Pteropus_vampyrus
ENSCGRG00001020605	-	66	70.270	ENSPNYG00000004149	TUT7	79	70.270	Pundamilia_nyererei
ENSCGRG00001020605	-	100	84.993	ENSRNOG00000016629	Tut7	100	84.926	Rattus_norvegicus
ENSCGRG00001020605	-	91	93.734	ENSRBIG00000016827	TUT7	98	93.333	Rhinopithecus_bieti
ENSCGRG00001020605	-	91	93.734	ENSRROG00000034432	TUT7	98	93.333	Rhinopithecus_roxellana
ENSCGRG00001020605	-	99	65.084	ENSSHAG00000008290	TUT7	97	65.506	Sarcophilus_harrisii
ENSCGRG00001020605	-	89	58.857	ENSSFOG00015009813	zcchc6	95	48.329	Scleropages_formosus
ENSCGRG00001020605	-	61	77.143	ENSSDUG00000012876	TUT7	73	77.143	Seriola_dumerili
ENSCGRG00001020605	-	91	71.162	ENSSARG00000009763	TUT7	91	71.119	Sorex_araneus
ENSCGRG00001020605	-	99	62.642	ENSSPUG00000004029	TUT7	99	63.098	Sphenodon_punctatus
ENSCGRG00001020605	-	67	49.931	ENSSPAG00000018387	-	91	54.321	Stegastes_partitus
ENSCGRG00001020605	-	100	78.600	ENSSSCG00000010952	TUT7	100	78.600	Sus_scrofa
ENSCGRG00001020605	-	99	59.744	ENSTGUG00000000624	TUT7	99	59.438	Taeniopygia_guttata
ENSCGRG00001020605	-	66	62.687	ENSTNIG00000015951	TUT7	100	63.636	Tetraodon_nigroviridis
ENSCGRG00001020605	-	99	70.760	ENSTBEG00000010446	TUT7	98	71.186	Tupaia_belangeri
ENSCGRG00001020605	-	94	80.575	ENSTTRG00000004236	TUT7	94	80.461	Tursiops_truncatus
ENSCGRG00001020605	-	60	93.810	ENSUAMG00000027094	-	91	93.810	Ursus_americanus
ENSCGRG00001020605	-	99	78.003	ENSUMAG00000004929	TUT7	98	78.205	Ursus_maritimus
ENSCGRG00001020605	-	96	83.445	ENSVPAG00000001946	TUT7	93	83.445	Vicugna_pacos
ENSCGRG00001020605	-	100	78.316	ENSVVUG00000022427	TUT7	100	78.451	Vulpes_vulpes
ENSCGRG00001020605	-	99	52.807	ENSXETG00000017552	tut7	99	52.741	Xenopus_tropicalis
ENSCGRG00001020605	-	70	60.951	ENSXCOG00000009445	-	90	60.611	Xiphophorus_couchianus