EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00001020646 (Gene tree)
Gene ID: -
Gene Symbol: Gm3854
Alias: -
Full Name: predicted gene 3854
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Minus strand
Length: 10460 bases
Position: chrscaffold_52:1303400-1313859
Accession: 3782026
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001021954	zf-C2H2	PF00096.26	2.4e-47	1	9
ENSCGRP00001021954	zf-C2H2	PF00096.26	2.4e-47	2	9
ENSCGRP00001021954	zf-C2H2	PF00096.26	2.4e-47	3	9
ENSCGRP00001021954	zf-C2H2	PF00096.26	2.4e-47	4	9
ENSCGRP00001021954	zf-C2H2	PF00096.26	2.4e-47	5	9
ENSCGRP00001021954	zf-C2H2	PF00096.26	2.4e-47	6	9
ENSCGRP00001021954	zf-C2H2	PF00096.26	2.4e-47	7	9
ENSCGRP00001021954	zf-C2H2	PF00096.26	2.4e-47	8	9
ENSCGRP00001021954	zf-C2H2	PF00096.26	2.4e-47	9	9
ENSCGRP00001021954	zf-met	PF12874.7	8.6e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001026198	-	1425	-	ENSCGRP00001021954	475 (aa)	-	-

Gene Model

Click here to download ENSCGRG00001020646's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001020646's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00001020646	Gm3854	57	38.519	ENSCGRG00001011389	Snai3	55	38.519
ENSCGRG00001020646	Gm3854	58	45.238	ENSCGRG00001015432	Gfi1	50	45.238
ENSCGRG00001020646	Gm3854	94	52.091	ENSCGRG00001011966	Zfp715	99	52.091
ENSCGRG00001020646	Gm3854	69	40.090	ENSCGRG00001017330	Repin1	86	40.090
ENSCGRG00001020646	Gm3854	62	48.123	ENSCGRG00001015424	-	79	48.123
ENSCGRG00001020646	Gm3854	96	50.000	ENSCGRG00001013939	Zfp454	98	50.000
ENSCGRG00001020646	Gm3854	55	46.360	ENSCGRG00001004047	-	63	46.360
ENSCGRG00001020646	Gm3854	90	50.216	ENSCGRG00001024303	-	99	50.216
ENSCGRG00001020646	Gm3854	78	42.929	ENSCGRG00001011074	Mynn	58	41.406
ENSCGRG00001020646	Gm3854	69	46.715	ENSCGRG00001002297	-	98	46.715
ENSCGRG00001020646	Gm3854	72	40.310	ENSCGRG00001010581	Prdm5	83	38.739
ENSCGRG00001020646	Gm3854	75	50.965	ENSCGRG00001017579	Zfp112	78	50.965
ENSCGRG00001020646	Gm3854	63	40.000	ENSCGRG00001013674	Snai2	50	40.000
ENSCGRG00001020646	Gm3854	73	47.552	ENSCGRG00001012523	-	98	47.552
ENSCGRG00001020646	Gm3854	95	53.691	ENSCGRG00001021088	Zfp354a	97	53.691
ENSCGRG00001020646	Gm3854	67	36.364	ENSCGRG00001008879	Maz	58	33.824
ENSCGRG00001020646	Gm3854	94	50.752	ENSCGRG00001000576	Zfp26	89	50.752
ENSCGRG00001020646	Gm3854	74	46.875	ENSCGRG00001013598	Zfp865	86	42.529
ENSCGRG00001020646	Gm3854	64	42.342	ENSCGRG00001012398	Zfp236	58	43.810
ENSCGRG00001020646	Gm3854	95	39.053	ENSCGRG00001018100	Zfp202	64	38.710
ENSCGRG00001020646	Gm3854	60	51.111	ENSCGRG00001012640	Zfp94	80	51.111
ENSCGRG00001020646	Gm3854	58	52.419	ENSCGRG00001019143	-	80	52.419
ENSCGRG00001020646	Gm3854	91	57.143	ENSCGRG00001010752	2610008E11Rik	94	57.143
ENSCGRG00001020646	Gm3854	68	51.327	ENSCGRG00001006591	Zkscan3	61	51.327
ENSCGRG00001020646	Gm3854	70	36.567	ENSCGRG00001015855	Zbtb41	51	36.567
ENSCGRG00001020646	Gm3854	77	30.526	ENSCGRG00001013065	Zfp384	63	37.952
ENSCGRG00001020646	Gm3854	95	51.481	ENSCGRG00001007115	-	99	51.481
ENSCGRG00001020646	Gm3854	95	49.648	ENSCGRG00001001639	Zfp882	99	49.648
ENSCGRG00001020646	Gm3854	96	47.826	ENSCGRG00001024630	-	96	47.826
ENSCGRG00001020646	Gm3854	99	49.515	ENSCGRG00001007163	-	99	49.020
ENSCGRG00001020646	Gm3854	59	38.542	ENSCGRG00001023063	Zfp423	63	38.542
ENSCGRG00001020646	Gm3854	56	38.095	ENSCGRG00001009557	Zfp319	93	38.503
ENSCGRG00001020646	Gm3854	62	42.857	ENSCGRG00001019408	Zbtb17	59	42.857
ENSCGRG00001020646	Gm3854	96	52.734	ENSCGRG00001023858	Zfp560	89	52.734
ENSCGRG00001020646	Gm3854	57	43.697	ENSCGRG00001005125	Wt1	50	44.444
ENSCGRG00001020646	Gm3854	63	50.262	ENSCGRG00001019468	Zfp628	57	50.262
ENSCGRG00001020646	Gm3854	56	49.612	ENSCGRG00001013561	Zfp768	50	49.612
ENSCGRG00001020646	Gm3854	96	53.101	ENSCGRG00001002406	Zfp39	91	53.101
ENSCGRG00001020646	Gm3854	63	43.564	ENSCGRG00001001429	Zfp574	86	47.788
ENSCGRG00001020646	Gm3854	59	52.332	ENSCGRG00001013367	Zfp61	63	52.332
ENSCGRG00001020646	Gm3854	74	62.500	ENSCGRG00001012803	-	91	62.500
ENSCGRG00001020646	Gm3854	68	39.785	ENSCGRG00001004071	Patz1	55	36.066
ENSCGRG00001020646	Gm3854	94	41.262	ENSCGRG00001010967	Zfp1	98	41.262
ENSCGRG00001020646	Gm3854	54	31.174	ENSCGRG00001013279	Zfp784	75	32.579
ENSCGRG00001020646	Gm3854	61	47.771	ENSCGRG00001013602	-	93	47.771

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001020646	Gm3854	96	68.776	ENSG00000018869	ZNF582	90	74.286	Homo_sapiens
ENSCGRG00001020646	Gm3854	95	69.767	ENSAMEG00000009560	ZNF582	92	69.767	Ailuropoda_melanoleuca
ENSCGRG00001020646	Gm3854	96	67.722	ENSANAG00000026033	ZNF582	86	67.722	Aotus_nancymaae
ENSCGRG00001020646	Gm3854	95	69.584	ENSBTAG00000030348	ZNF582	88	69.584	Bos_taurus
ENSCGRG00001020646	Gm3854	99	66.803	ENSCJAG00000020283	ZNF582	94	66.803	Callithrix_jacchus
ENSCGRG00001020646	Gm3854	96	69.414	ENSCHIG00000016463	-	90	69.414	Capra_hircus
ENSCGRG00001020646	Gm3854	99	67.901	ENSTSYG00000029281	ZNF582	93	67.901	Carlito_syrichta
ENSCGRG00001020646	Gm3854	97	67.220	ENSCPOG00000032242	-	92	67.220	Cavia_porcellus
ENSCGRG00001020646	Gm3854	96	68.565	ENSCCAG00000025711	ZNF582	92	68.565	Cebus_capucinus
ENSCGRG00001020646	Gm3854	96	69.198	ENSCATG00000036892	ZNF582	86	69.198	Cercocebus_atys
ENSCGRG00001020646	Gm3854	90	66.213	ENSCLAG00000000758	-	82	66.213	Chinchilla_lanigera
ENSCGRG00001020646	Gm3854	96	69.198	ENSCSAG00000001670	ZNF582	86	69.198	Chlorocebus_sabaeus
ENSCGRG00001020646	Gm3854	94	68.148	ENSCHOG00000012411	ZNF582	87	68.148	Choloepus_hoffmanni
ENSCGRG00001020646	Gm3854	96	68.987	ENSCANG00000037320	ZNF582	92	68.987	Colobus_angolensis_palliatus
ENSCGRG00001020646	Gm3854	100	100.000	ENSCGRG00000008411	Gm3854	100	100.000	Cricetulus_griseus_crigri
ENSCGRG00001020646	Gm3854	94	70.282	ENSEASG00005020473	ZNF582	91	70.282	Equus_asinus_asinus
ENSCGRG00001020646	Gm3854	86	68.957	ENSECAG00000011892	ZNF582	85	68.957	Equus_caballus
ENSCGRG00001020646	Gm3854	96	68.565	ENSGGOG00000003541	ZNF582	92	68.565	Gorilla_gorilla
ENSCGRG00001020646	Gm3854	95	69.767	ENSHGLG00000009291	-	93	69.767	Heterocephalus_glaber_female
ENSCGRG00001020646	Gm3854	95	69.767	ENSHGLG00100007619	ZNF582	93	69.767	Heterocephalus_glaber_male
ENSCGRG00001020646	Gm3854	96	69.409	ENSMFAG00000002728	ZNF582	92	69.409	Macaca_fascicularis
ENSCGRG00001020646	Gm3854	96	69.409	ENSMMUG00000000362	ZNF582	92	69.409	Macaca_mulatta
ENSCGRG00001020646	Gm3854	96	69.620	ENSMNEG00000028263	ZNF582	91	68.736	Macaca_nemestrina
ENSCGRG00001020646	Gm3854	96	68.776	ENSMLEG00000030585	ZNF582	92	68.776	Mandrillus_leucophaeus
ENSCGRG00001020646	Gm3854	95	70.961	ENSMICG00000012915	ZNF582	93	70.961	Microcebus_murinus
ENSCGRG00001020646	Gm3854	96	67.655	ENSMPUG00000006660	ZNF582	95	67.655	Mustela_putorius_furo
ENSCGRG00001020646	Gm3854	94	72.331	ENSNGAG00000000088	Gm3854	92	72.331	Nannospalax_galili
ENSCGRG00001020646	Gm3854	96	68.776	ENSNLEG00000010794	ZNF582	92	68.776	Nomascus_leucogenys
ENSCGRG00001020646	Gm3854	95	65.042	ENSODEG00000009980	ZNF582	95	65.042	Octodon_degus
ENSCGRG00001020646	Gm3854	96	69.620	ENSOCUG00000029075	ZNF582	93	69.620	Oryctolagus_cuniculus
ENSCGRG00001020646	Gm3854	96	68.565	ENSPPAG00000029277	ZNF582	92	68.565	Pan_paniscus
ENSCGRG00001020646	Gm3854	96	68.565	ENSPTRG00000011539	ZNF582	92	68.565	Pan_troglodytes
ENSCGRG00001020646	Gm3854	96	69.198	ENSPANG00000000398	ZNF582	92	69.198	Papio_anubis
ENSCGRG00001020646	Gm3854	96	69.409	ENSPPYG00000010446	ZNF582	83	69.409	Pongo_abelii
ENSCGRG00001020646	Gm3854	94	64.316	ENSPCAG00000000878	ZNF582	88	64.316	Procavia_capensis
ENSCGRG00001020646	Gm3854	96	69.831	ENSPCOG00000014863	ZNF582	92	69.831	Propithecus_coquereli
ENSCGRG00001020646	Gm3854	96	68.565	ENSRBIG00000042067	ZNF582	86	68.565	Rhinopithecus_bieti
ENSCGRG00001020646	Gm3854	96	68.565	ENSRROG00000036529	ZNF582	92	68.565	Rhinopithecus_roxellana
ENSCGRG00001020646	Gm3854	97	67.012	ENSSBOG00000024080	ZNF582	87	67.012	Saimiri_boliviensis_boliviensis
ENSCGRG00001020646	Gm3854	95	67.865	ENSSSCG00000003322	-	91	67.865	Sus_scrofa
ENSCGRG00001020646	Gm3854	95	69.133	ENSTTRG00000011290	ZNF582	83	69.133	Tursiops_truncatus
ENSCGRG00001020646	Gm3854	84	68.106	ENSUAMG00000010469	ZNF582	91	68.106	Ursus_americanus
ENSCGRG00001020646	Gm3854	84	68.345	ENSUMAG00000024767	-	91	68.345	Ursus_maritimus