EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCGRG00001021407 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Plus strand
Length: 79111 bases
Position: chrscaffold_49:2748544-2827654
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001023106	TUDOR	PF00567.24	1.2e-32	1	2
ENSCGRP00001023106	TUDOR	PF00567.24	1.2e-32	2	2
ENSCGRP00001023085	TUDOR	PF00567.24	4.4e-23	1	1
ENSCGRP00001023087	TUDOR	PF00567.24	7.8e-12	1	1
ENSCGRP00001023106	DEAD	PF00270.29	4.4e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001027332	-	1065	-	ENSCGRP00001023087	354 (aa)	-	-
ENSCGRT00001027351	-	3630	-	ENSCGRP00001023106	1209 (aa)	-	-
ENSCGRT00001027330	-	1224	-	ENSCGRP00001023085	407 (aa)	-	-

Gene Model

Click here to download ENSCGRG00001021407's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001021407's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001021407	-	71	42.381	ENSAPOG00000006421	tdrd12	82	42.381	Acanthochromis_polyacanthus
ENSCGRG00001021407	-	62	82.012	ENSAMEG00000015440	-	100	76.505	Ailuropoda_melanoleuca
ENSCGRG00001021407	-	78	43.284	ENSACIG00000021652	tdrd12	91	43.602	Amphilophus_citrinellus
ENSCGRG00001021407	-	79	46.927	ENSAOCG00000016463	tdrd12	79	46.927	Amphiprion_ocellaris
ENSCGRG00001021407	-	80	46.237	ENSAPEG00000015105	tdrd12	81	46.237	Amphiprion_percula
ENSCGRG00001021407	-	71	44.728	ENSATEG00000011608	tdrd12	82	44.728	Anabas_testudineus
ENSCGRG00001021407	-	81	59.365	ENSAPLG00000011417	-	92	59.365	Anas_platyrhynchos
ENSCGRG00001021407	-	69	52.959	ENSACAG00000029615	-	87	52.819	Anolis_carolinensis
ENSCGRG00001021407	-	98	72.390	ENSANAG00000023166	-	99	73.096	Aotus_nancymaae
ENSCGRG00001021407	-	67	46.980	ENSAMXG00000013811	tdrd12	79	46.980	Astyanax_mexicanus
ENSCGRG00001021407	-	94	77.711	ENSBTAG00000019266	TDRD12	99	77.812	Bos_taurus
ENSCGRG00001021407	-	98	71.926	ENSCJAG00000000763	-	99	72.589	Callithrix_jacchus
ENSCGRG00001021407	-	99	81.343	ENSCAFG00000007505	TDRD12	99	77.310	Canis_familiaris
ENSCGRG00001021407	-	97	78.551	ENSCAFG00020019790	-	90	78.551	Canis_lupus_dingo
ENSCGRG00001021407	-	96	72.577	ENSTSYG00000012034	-	99	72.798	Carlito_syrichta
ENSCGRG00001021407	-	98	76.832	ENSCPOG00000002876	-	99	76.139	Cavia_porcellus
ENSCGRG00001021407	-	98	62.877	ENSCCAG00000037592	-	91	73.008	Cebus_capucinus
ENSCGRG00001021407	-	85	74.807	ENSCATG00000038627	-	91	74.807	Cercocebus_atys
ENSCGRG00001021407	-	99	76.023	ENSCLAG00000012138	-	94	76.023	Chinchilla_lanigera
ENSCGRG00001021407	-	97	73.193	ENSCSAG00000004794	-	91	76.945	Chlorocebus_sabaeus
ENSCGRG00001021407	-	69	92.308	ENSCHOG00000009768	-	54	92.308	Choloepus_hoffmanni
ENSCGRG00001021407	-	87	68.110	ENSCPBG00000000147	-	91	67.843	Chrysemys_picta_bellii
ENSCGRG00001021407	-	98	72.454	ENSCANG00000040785	-	99	72.589	Colobus_angolensis_palliatus
ENSCGRG00001021407	-	96	99.706	ENSCGRG00000007286	-	100	96.437	Cricetulus_griseus_crigri
ENSCGRG00001021407	-	73	43.284	ENSCSEG00000001744	-	68	43.284	Cynoglossus_semilaevis
ENSCGRG00001021407	-	59	39.448	ENSCVAG00000004277	tdrd12	90	39.448	Cyprinodon_variegatus
ENSCGRG00001021407	-	86	45.098	ENSDARG00000075217	tdrd12	80	45.098	Danio_rerio
ENSCGRG00001021407	-	99	78.835	ENSDNOG00000017244	-	93	78.835	Dasypus_novemcinctus
ENSCGRG00001021407	-	99	73.483	ENSDORG00000012134	-	99	73.377	Dipodomys_ordii
ENSCGRG00001021407	-	71	76.712	ENSETEG00000015088	-	70	79.866	Echinops_telfairi
ENSCGRG00001021407	-	99	74.815	ENSEASG00005021053	-	99	74.529	Equus_asinus_asinus
ENSCGRG00001021407	-	71	95.652	ENSEEUG00000008457	-	84	90.816	Erinaceus_europaeus
ENSCGRG00001021407	-	94	39.029	ENSELUG00000017494	tdrd12	91	43.860	Esox_lucius
ENSCGRG00001021407	-	99	43.382	ENSFALG00000000259	-	94	43.382	Ficedula_albicollis
ENSCGRG00001021407	-	99	75.702	ENSFDAG00000014797	-	99	75.702	Fukomys_damarensis
ENSCGRG00001021407	-	90	52.364	ENSGALG00000004704	-	96	52.364	Gallus_gallus
ENSCGRG00001021407	-	89	41.981	ENSGAFG00000003729	tdrd12	83	41.981	Gambusia_affinis
ENSCGRG00001021407	-	90	69.841	ENSGAGG00000000247	-	89	69.841	Gopherus_agassizii
ENSCGRG00001021407	-	98	73.380	ENSGGOG00000011938	-	99	73.604	Gorilla_gorilla
ENSCGRG00001021407	-	64	46.008	ENSHBUG00000020426	tdrd12	78	46.008	Haplochromis_burtoni
ENSCGRG00001021407	-	99	78.624	ENSHGLG00000015608	-	99	78.624	Heterocephalus_glaber_female
ENSCGRG00001021407	-	95	68.817	ENSHGLG00100008227	-	91	82.175	Heterocephalus_glaber_male
ENSCGRG00001021407	-	85	42.308	ENSIPUG00000016825	tdrd12	79	42.308	Ictalurus_punctatus
ENSCGRG00001021407	-	99	83.292	ENSSTOG00000013638	-	99	83.292	Ictidomys_tridecemlineatus
ENSCGRG00001021407	-	52	45.669	ENSKMAG00000008031	tdrd12	75	45.669	Kryptolebias_marmoratus
ENSCGRG00001021407	-	71	42.331	ENSLBEG00000005601	tdrd12	82	42.331	Labrus_bergylta
ENSCGRG00001021407	-	99	41.253	ENSLACG00000010650	-	99	43.085	Latimeria_chalumnae
ENSCGRG00001021407	-	87	44.193	ENSLOCG00000001690	tdrd12	79	44.193	Lepisosteus_oculatus
ENSCGRG00001021407	-	98	72.685	ENSLAFG00000008698	-	92	83.436	Loxodonta_africana
ENSCGRG00001021407	-	98	73.148	ENSMFAG00000044756	-	99	73.604	Macaca_fascicularis
ENSCGRG00001021407	-	99	77.525	ENSMMUG00000015608	-	99	73.858	Macaca_mulatta
ENSCGRG00001021407	-	96	73.349	ENSMNEG00000043067	-	99	73.834	Macaca_nemestrina
ENSCGRG00001021407	-	96	73.821	ENSMLEG00000042036	-	99	74.093	Mandrillus_leucophaeus
ENSCGRG00001021407	-	97	31.873	ENSMAMG00000013867	tdrd12	90	44.013	Mastacembelus_armatus
ENSCGRG00001021407	-	64	46.230	ENSMZEG00005024214	tdrd12	78	46.230	Maylandia_zebra
ENSCGRG00001021407	-	69	49.467	ENSMGAG00000005627	-	100	49.467	Meleagris_gallopavo
ENSCGRG00001021407	-	99	91.052	ENSMAUG00000013767	-	99	91.052	Mesocricetus_auratus
ENSCGRG00001021407	-	98	71.462	ENSMICG00000003623	-	99	76.904	Microcebus_murinus
ENSCGRG00001021407	-	99	91.847	ENSMOCG00000002366	-	99	91.847	Microtus_ochrogaster
ENSCGRG00001021407	-	81	43.774	ENSMMOG00000018662	tdrd12	83	46.429	Mola_mola
ENSCGRG00001021407	-	96	69.585	ENSMODG00000012286	-	93	69.585	Monodelphis_domestica
ENSCGRG00001021407	-	73	43.750	ENSMALG00000006918	tdrd12	81	41.063	Monopterus_albus
ENSCGRG00001021407	-	99	91.133	MGP_CAROLIEiJ_G0029587	-	98	95.980	Mus_caroli
ENSCGRG00001021407	-	99	91.133	MGP_PahariEiJ_G0012821	-	98	93.970	Mus_pahari
ENSCGRG00001021407	-	99	91.133	MGP_SPRETEiJ_G0030686	-	98	96.482	Mus_spretus
ENSCGRG00001021407	-	99	76.412	ENSMPUG00000007791	-	93	76.412	Mustela_putorius_furo
ENSCGRG00001021407	-	98	73.441	ENSMLUG00000010694	-	99	79.146	Myotis_lucifugus
ENSCGRG00001021407	-	99	84.746	ENSNGAG00000000793	-	99	84.746	Nannospalax_galili
ENSCGRG00001021407	-	52	42.424	ENSNBRG00000017878	-	79	45.574	Neolamprologus_brichardi
ENSCGRG00001021407	-	98	61.894	ENSNLEG00000007635	-	91	73.522	Nomascus_leucogenys
ENSCGRG00001021407	-	51	86.111	ENSMEUG00000014059	-	52	85.443	Notamacropus_eugenii
ENSCGRG00001021407	-	98	59.302	ENSOPRG00000015809	-	85	68.548	Ochotona_princeps
ENSCGRG00001021407	-	98	77.000	ENSODEG00000014443	-	99	75.783	Octodon_degus
ENSCGRG00001021407	-	81	46.885	ENSONIG00000010630	tdrd12	91	46.885	Oreochromis_niloticus
ENSCGRG00001021407	-	99	57.794	ENSOANG00000029442	-	99	60.104	Ornithorhynchus_anatinus
ENSCGRG00001021407	-	97	81.013	ENSOCUG00000016911	-	99	78.407	Oryctolagus_cuniculus
ENSCGRG00001021407	-	72	43.137	ENSORLG00000027859	tdrd12	80	38.947	Oryzias_latipes
ENSCGRG00001021407	-	82	43.322	ENSORLG00015020835	tdrd12	70	43.322	Oryzias_latipes_hsok
ENSCGRG00001021407	-	71	43.910	ENSOMEG00000021862	tdrd12	82	43.910	Oryzias_melastigma
ENSCGRG00001021407	-	99	72.477	ENSOGAG00000001571	-	92	84.451	Otolemur_garnettii
ENSCGRG00001021407	-	98	80.826	ENSOARG00000004254	-	93	80.826	Ovis_aries
ENSCGRG00001021407	-	97	69.087	ENSPPAG00000042284	-	99	73.096	Pan_paniscus
ENSCGRG00001021407	-	98	71.824	ENSPPRG00000002389	-	100	76.709	Panthera_pardus
ENSCGRG00001021407	-	98	64.583	ENSPTRG00000010795	TDRD12	91	75.578	Pan_troglodytes
ENSCGRG00001021407	-	89	89.109	ENSPANG00000001203	-	93	89.109	Papio_anubis
ENSCGRG00001021407	-	85	46.313	ENSPKIG00000006407	tdrd12	71	46.313	Paramormyrops_kingsleyae
ENSCGRG00001021407	-	99	58.272	ENSPSIG00000012970	-	100	68.500	Pelodiscus_sinensis
ENSCGRG00001021407	-	63	48.178	ENSPMGG00000022691	tdrd12	77	48.178	Periophthalmus_magnuspinnatus
ENSCGRG00001021407	-	98	96.482	ENSPEMG00000009233	-	99	95.467	Peromyscus_maniculatus_bairdii
ENSCGRG00001021407	-	98	67.394	ENSPCIG00000020993	-	93	67.394	Phascolarctos_cinereus
ENSCGRG00001021407	-	87	41.981	ENSPFOG00000008184	tdrd12	85	41.981	Poecilia_formosa
ENSCGRG00001021407	-	52	42.723	ENSPMEG00000006420	tdrd12	69	42.529	Poecilia_mexicana
ENSCGRG00001021407	-	63	45.425	ENSPREG00000004916	tdrd12	67	45.425	Poecilia_reticulata
ENSCGRG00001021407	-	98	72.917	ENSPPYG00000009821	-	92	76.901	Pongo_abelii
ENSCGRG00001021407	-	96	61.848	ENSPCAG00000013510	-	78	73.832	Procavia_capensis
ENSCGRG00001021407	-	98	66.047	ENSPCOG00000023600	-	99	71.827	Propithecus_coquereli
ENSCGRG00001021407	-	83	95.361	ENSPVAG00000014599	-	83	93.264	Pteropus_vampyrus
ENSCGRG00001021407	-	64	45.902	ENSPNYG00000022866	tdrd12	76	45.902	Pundamilia_nyererei
ENSCGRG00001021407	-	68	43.750	ENSPNAG00000003413	tdrd12	77	43.709	Pygocentrus_nattereri
ENSCGRG00001021407	-	99	88.559	ENSRNOG00000012719	Tdrd12	93	88.559	Rattus_norvegicus
ENSCGRG00001021407	-	97	62.808	ENSRBIG00000019899	-	91	71.345	Rhinopithecus_bieti
ENSCGRG00001021407	-	98	72.917	ENSRROG00000036351	-	99	73.096	Rhinopithecus_roxellana
ENSCGRG00001021407	-	98	72.854	ENSSBOG00000034916	-	99	73.350	Saimiri_boliviensis_boliviensis
ENSCGRG00001021407	-	99	63.004	ENSSHAG00000002599	-	92	69.605	Sarcophilus_harrisii
ENSCGRG00001021407	-	66	47.699	ENSSFOG00015000297	tdrd12	72	47.699	Scleropages_formosus
ENSCGRG00001021407	-	98	30.693	ENSSMAG00000002870	tdrd12	90	43.450	Scophthalmus_maximus
ENSCGRG00001021407	-	67	47.869	ENSSDUG00000017304	tdrd12	78	47.869	Seriola_dumerili
ENSCGRG00001021407	-	67	46.885	ENSSLDG00000004415	tdrd12	78	46.885	Seriola_lalandi_dorsalis
ENSCGRG00001021407	-	96	73.397	ENSSARG00000005357	-	92	82.875	Sorex_araneus
ENSCGRG00001021407	-	74	64.596	ENSSPUG00000013174	-	82	64.596	Sphenodon_punctatus
ENSCGRG00001021407	-	79	44.974	ENSSPAG00000005706	tdrd12	88	44.974	Stegastes_partitus
ENSCGRG00001021407	-	74	74.160	ENSSSCG00000002857	-	90	74.160	Sus_scrofa
ENSCGRG00001021407	-	79	40.000	ENSTRUG00000021888	tdrd12	91	40.000	Takifugu_rubripes
ENSCGRG00001021407	-	52	38.498	ENSTNIG00000000465	-	73	44.595	Tetraodon_nigroviridis
ENSCGRG00001021407	-	63	83.333	ENSTBEG00000007609	-	68	83.333	Tupaia_belangeri
ENSCGRG00001021407	-	96	71.734	ENSTTRG00000012206	-	92	84.498	Tursiops_truncatus
ENSCGRG00001021407	-	95	71.868	ENSUAMG00000007298	-	89	76.694	Ursus_americanus
ENSCGRG00001021407	-	95	71.395	ENSUMAG00000014314	-	89	76.353	Ursus_maritimus
ENSCGRG00001021407	-	96	63.810	ENSVPAG00000012051	-	85	78.173	Vicugna_pacos
ENSCGRG00001021407	-	99	78.723	ENSVVUG00000016637	-	93	78.455	Vulpes_vulpes
ENSCGRG00001021407	-	70	42.379	ENSXETG00000031945	-	100	41.779	Xenopus_tropicalis
ENSCGRG00001021407	-	70	43.062	ENSXMAG00000020908	tdrd12	92	43.062	Xiphophorus_maculatus