EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00001021483 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Plus strand
Length: 481 bases
Position: chrscaffold_52:4149041-4149521
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001023187	zf-U1	PF06220.12	2.1e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001027432	-	438	-	ENSCGRP00001023187	145 (aa)	-	-

Gene Model

Click here to download ENSCGRG00001021483's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001021483's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00001021483	-	100	81.761	ENSCGRG00001009011	-	100	88.050
ENSCGRG00001021483	-	59	57.000	ENSCGRG00001021613	-	60	66.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001021483	-	100	85.535	ENSG00000124562	SNRPC	100	87.421	Homo_sapiens
ENSCGRG00001021483	-	100	83.648	ENSAMEG00000000963	SNRPC	87	86.624	Ailuropoda_melanoleuca
ENSCGRG00001021483	-	100	81.132	ENSACAG00000015721	SNRPC	87	84.076	Anolis_carolinensis
ENSCGRG00001021483	-	100	85.535	ENSANAG00000019696	-	100	87.421	Aotus_nancymaae
ENSCGRG00001021483	-	100	84.906	ENSANAG00000007843	-	100	86.792	Aotus_nancymaae
ENSCGRG00001021483	-	100	72.327	ENSANAG00000021026	-	100	69.182	Aotus_nancymaae
ENSCGRG00001021483	-	100	83.019	ENSANAG00000019157	-	100	83.019	Aotus_nancymaae
ENSCGRG00001021483	-	100	69.595	ENSANAG00000021444	-	61	72.941	Aotus_nancymaae
ENSCGRG00001021483	-	99	78.481	ENSANAG00000020588	-	92	80.380	Aotus_nancymaae
ENSCGRG00001021483	-	100	74.843	ENSANAG00000019726	-	92	77.358	Aotus_nancymaae
ENSCGRG00001021483	-	100	74.830	ENSAMXG00000032641	snrpc	100	72.000	Astyanax_mexicanus
ENSCGRG00001021483	-	100	85.535	ENSBTAG00000024549	SNRPC	100	87.421	Bos_taurus
ENSCGRG00001021483	-	100	85.535	ENSCJAG00000015321	-	100	87.421	Callithrix_jacchus
ENSCGRG00001021483	-	100	81.761	ENSCJAG00000041822	-	100	85.535	Callithrix_jacchus
ENSCGRG00001021483	-	100	83.019	ENSCJAG00000043055	-	100	86.164	Callithrix_jacchus
ENSCGRG00001021483	-	100	69.182	ENSCAFG00000025525	-	100	69.182	Canis_familiaris
ENSCGRG00001021483	-	57	77.083	ENSCAFG00000001231	-	61	74.026	Canis_familiaris
ENSCGRG00001021483	-	100	75.000	ENSCAFG00000028988	-	100	77.500	Canis_familiaris
ENSCGRG00001021483	-	100	79.874	ENSCAFG00000031775	-	100	83.648	Canis_familiaris
ENSCGRG00001021483	-	100	85.535	ENSCAFG00020005945	-	100	87.421	Canis_lupus_dingo
ENSCGRG00001021483	-	100	65.730	ENSCAFG00020026577	-	100	73.596	Canis_lupus_dingo
ENSCGRG00001021483	-	99	67.516	ENSCAFG00020009944	-	90	77.070	Canis_lupus_dingo
ENSCGRG00001021483	-	100	79.874	ENSCAFG00020017383	-	100	83.648	Canis_lupus_dingo
ENSCGRG00001021483	-	100	82.390	ENSCAFG00020005758	-	99	84.713	Canis_lupus_dingo
ENSCGRG00001021483	-	100	63.816	ENSCHIG00000005039	-	100	59.119	Capra_hircus
ENSCGRG00001021483	-	100	84.906	ENSCHIG00000012087	-	100	86.792	Capra_hircus
ENSCGRG00001021483	-	100	85.535	ENSTSYG00000011216	-	100	87.421	Carlito_syrichta
ENSCGRG00001021483	-	99	77.848	ENSTSYG00000029745	-	50	75.000	Carlito_syrichta
ENSCGRG00001021483	-	100	85.714	ENSTSYG00000025721	-	100	82.313	Carlito_syrichta
ENSCGRG00001021483	-	88	84.507	ENSCAPG00000005161	SNRPC	100	86.620	Cavia_aperea
ENSCGRG00001021483	-	100	85.535	ENSCPOG00000008563	SNRPC	100	87.421	Cavia_porcellus
ENSCGRG00001021483	-	98	78.873	ENSCCAG00000022209	-	95	78.873	Cebus_capucinus
ENSCGRG00001021483	-	99	87.413	ENSCCAG00000026624	-	66	87.413	Cebus_capucinus
ENSCGRG00001021483	-	100	58.491	ENSCCAG00000028293	-	59	64.935	Cebus_capucinus
ENSCGRG00001021483	-	100	78.616	ENSCCAG00000036059	-	89	82.390	Cebus_capucinus
ENSCGRG00001021483	-	98	75.641	ENSCCAG00000022751	-	95	80.128	Cebus_capucinus
ENSCGRG00001021483	-	100	85.535	ENSCATG00000035787	SNRPC	100	87.421	Cercocebus_atys
ENSCGRG00001021483	-	99	72.903	ENSCLAG00000010242	-	75	72.500	Chinchilla_lanigera
ENSCGRG00001021483	-	100	85.535	ENSCLAG00000016920	SNRPC	100	87.421	Chinchilla_lanigera
ENSCGRG00001021483	-	100	66.292	ENSCSAG00000009821	SNRPC	100	74.157	Chlorocebus_sabaeus
ENSCGRG00001021483	-	100	73.585	ENSCHOG00000011439	SNRPC	89	73.585	Choloepus_hoffmanni
ENSCGRG00001021483	-	100	83.019	ENSCPBG00000027142	SNRPC	100	84.906	Chrysemys_picta_bellii
ENSCGRG00001021483	-	97	46.429	ENSCING00000021229	ci-zf(matrin)-4	61	58.667	Ciona_intestinalis
ENSCGRG00001021483	-	100	85.535	ENSCANG00000028035	SNRPC	100	87.421	Colobus_angolensis_palliatus
ENSCGRG00001021483	-	100	79.874	ENSCGRG00000005005	Snrpc	99	87.261	Cricetulus_griseus_crigri
ENSCGRG00001021483	-	100	69.811	ENSDARG00000009871	snrpc	100	72.327	Danio_rerio
ENSCGRG00001021483	-	57	77.083	ENSDNOG00000042403	-	67	74.026	Dasypus_novemcinctus
ENSCGRG00001021483	-	100	84.277	ENSDNOG00000034699	-	99	86.164	Dasypus_novemcinctus
ENSCGRG00001021483	-	94	66.887	ENSDORG00000029823	-	86	65.909	Dipodomys_ordii
ENSCGRG00001021483	-	100	66.667	ENSDORG00000005955	Snrpc	66	67.516	Dipodomys_ordii
ENSCGRG00001021483	-	98	84.615	ENSETEG00000008268	-	100	84.615	Echinops_telfairi
ENSCGRG00001021483	-	98	80.769	ENSETEG00000011265	-	100	80.128	Echinops_telfairi
ENSCGRG00001021483	-	100	85.535	ENSEASG00005021007	SNRPC	100	87.421	Equus_asinus_asinus
ENSCGRG00001021483	-	100	85.535	ENSECAG00000026848	SNRPC	100	87.421	Equus_caballus
ENSCGRG00001021483	-	99	74.051	ENSEEUG00000014633	SNRPC	90	74.051	Erinaceus_europaeus
ENSCGRG00001021483	-	100	65.000	ENSELUG00000000815	SNRPC	50	70.513	Esox_lucius
ENSCGRG00001021483	-	100	85.535	ENSFCAG00000044077	-	100	87.421	Felis_catus
ENSCGRG00001021483	-	100	77.987	ENSFCAG00000031775	-	78	84.091	Felis_catus
ENSCGRG00001021483	-	100	84.277	ENSFALG00000003756	SNRPC	100	86.164	Ficedula_albicollis
ENSCGRG00001021483	-	100	85.535	ENSFDAG00000018111	SNRPC	100	87.421	Fukomys_damarensis
ENSCGRG00001021483	-	100	83.125	ENSGALG00000002773	SNRPC	100	85.000	Gallus_gallus
ENSCGRG00001021483	-	100	83.019	ENSGAGG00000003063	SNRPC	100	84.906	Gopherus_agassizii
ENSCGRG00001021483	-	100	85.535	ENSGGOG00000012499	SNRPC	100	87.421	Gorilla_gorilla
ENSCGRG00001021483	-	79	59.690	ENSHGLG00000005871	-	54	63.636	Heterocephalus_glaber_female
ENSCGRG00001021483	-	100	85.535	ENSHGLG00000013981	SNRPC	100	87.421	Heterocephalus_glaber_female
ENSCGRG00001021483	-	100	73.856	ENSHGLG00000017741	-	100	67.722	Heterocephalus_glaber_female
ENSCGRG00001021483	-	100	77.358	ENSHGLG00100017764	-	100	83.019	Heterocephalus_glaber_male
ENSCGRG00001021483	-	100	73.856	ENSHGLG00100010786	-	100	67.722	Heterocephalus_glaber_male
ENSCGRG00001021483	-	100	85.535	ENSHGLG00100009478	SNRPC	100	87.421	Heterocephalus_glaber_male
ENSCGRG00001021483	-	100	72.956	ENSIPUG00000024851	snrpc	100	72.956	Ictalurus_punctatus
ENSCGRG00001021483	-	100	85.535	ENSSTOG00000013786	SNRPC	100	87.421	Ictidomys_tridecemlineatus
ENSCGRG00001021483	-	100	81.761	ENSJJAG00000021741	Snrpc	100	88.050	Jaculus_jaculus
ENSCGRG00001021483	-	100	74.375	ENSLACG00000013753	SNRPC	88	79.747	Latimeria_chalumnae
ENSCGRG00001021483	-	100	85.535	ENSLAFG00000013534	SNRPC	100	87.421	Loxodonta_africana
ENSCGRG00001021483	-	100	85.535	ENSMFAG00000031764	-	100	87.421	Macaca_fascicularis
ENSCGRG00001021483	-	100	84.906	ENSMFAG00000030525	-	100	86.792	Macaca_fascicularis
ENSCGRG00001021483	-	100	84.277	ENSMMUG00000000869	-	95	87.179	Macaca_mulatta
ENSCGRG00001021483	-	100	75.472	ENSMMUG00000045425	-	100	78.616	Macaca_mulatta
ENSCGRG00001021483	-	100	84.277	ENSMMUG00000039415	-	100	86.164	Macaca_mulatta
ENSCGRG00001021483	-	100	85.535	ENSMNEG00000032731	SNRPC	100	87.421	Macaca_nemestrina
ENSCGRG00001021483	-	100	85.535	ENSMLEG00000033916	-	100	87.421	Mandrillus_leucophaeus
ENSCGRG00001021483	-	97	76.774	ENSMLEG00000040224	-	89	80.000	Mandrillus_leucophaeus
ENSCGRG00001021483	-	97	62.581	ENSMLEG00000039724	-	81	60.000	Mandrillus_leucophaeus
ENSCGRG00001021483	-	100	84.177	ENSMGAG00000006054	SNRPC	100	86.076	Meleagris_gallopavo
ENSCGRG00001021483	-	100	76.552	ENSMICG00000009130	-	100	76.101	Microcebus_murinus
ENSCGRG00001021483	-	100	81.761	ENSMICG00000007339	-	100	80.503	Microcebus_murinus
ENSCGRG00001021483	-	100	72.956	ENSMICG00000036552	-	87	72.436	Microcebus_murinus
ENSCGRG00001021483	-	100	84.906	ENSMICG00000032183	-	100	86.792	Microcebus_murinus
ENSCGRG00001021483	-	100	81.761	ENSMOCG00000017609	Snrpc	100	88.050	Microtus_ochrogaster
ENSCGRG00001021483	-	100	56.954	ENSMODG00000025263	-	100	57.862	Monodelphis_domestica
ENSCGRG00001021483	-	100	84.277	ENSMODG00000013904	-	100	86.164	Monodelphis_domestica
ENSCGRG00001021483	-	100	57.143	ENSMALG00000001197	snrpc	51	66.667	Monopterus_albus
ENSCGRG00001021483	-	100	81.761	MGP_CAROLIEiJ_G0021308	Snrpc	100	88.050	Mus_caroli
ENSCGRG00001021483	-	100	81.761	ENSMUSG00000024217	Snrpc	100	88.050	Mus_musculus
ENSCGRG00001021483	-	57	70.833	MGP_SPRETEiJ_G0022221	-	80	80.208	Mus_spretus
ENSCGRG00001021483	-	100	83.648	ENSMPUG00000003210	SNRPC	99	86.624	Mustela_putorius_furo
ENSCGRG00001021483	-	100	83.648	ENSMLUG00000002488	SNRPC	99	86.624	Myotis_lucifugus
ENSCGRG00001021483	-	100	81.761	ENSNGAG00000019686	Snrpc	100	88.050	Nannospalax_galili
ENSCGRG00001021483	-	100	85.535	ENSNLEG00000034810	SNRPC	100	87.421	Nomascus_leucogenys
ENSCGRG00001021483	-	88	83.803	ENSMEUG00000009300	SNRPC	100	85.915	Notamacropus_eugenii
ENSCGRG00001021483	-	100	84.277	ENSODEG00000019633	-	100	86.164	Octodon_degus
ENSCGRG00001021483	-	100	88.050	ENSODEG00000020201	-	100	88.050	Octodon_degus
ENSCGRG00001021483	-	100	85.535	ENSODEG00000020370	-	100	87.421	Octodon_degus
ENSCGRG00001021483	-	100	85.535	ENSODEG00000017080	-	100	87.421	Octodon_degus
ENSCGRG00001021483	-	81	79.545	ENSODEG00000006008	-	95	79.545	Octodon_degus
ENSCGRG00001021483	-	100	85.535	ENSODEG00000018985	-	100	87.421	Octodon_degus
ENSCGRG00001021483	-	89	78.231	ENSOANG00000003405	SNRPC	100	82.432	Ornithorhynchus_anatinus
ENSCGRG00001021483	-	100	86.164	ENSOCUG00000026430	-	99	86.164	Oryctolagus_cuniculus
ENSCGRG00001021483	-	100	83.648	ENSOCUG00000023292	-	100	85.535	Oryctolagus_cuniculus
ENSCGRG00001021483	-	100	85.535	ENSOCUG00000026668	-	100	87.421	Oryctolagus_cuniculus
ENSCGRG00001021483	-	83	40.496	ENSORLG00000007308	snrpc	51	69.333	Oryzias_latipes
ENSCGRG00001021483	-	63	69.474	ENSORLG00020012607	SNRPC	65	64.151	Oryzias_latipes_hni
ENSCGRG00001021483	-	63	69.474	ENSOMEG00000012014	snrpc	86	67.500	Oryzias_melastigma
ENSCGRG00001021483	-	97	74.675	ENSOGAG00000028405	-	99	72.078	Otolemur_garnettii
ENSCGRG00001021483	-	100	82.390	ENSOGAG00000026269	-	100	85.535	Otolemur_garnettii
ENSCGRG00001021483	-	97	85.806	ENSOGAG00000008755	-	88	86.624	Otolemur_garnettii
ENSCGRG00001021483	-	100	85.535	ENSOARG00000010823	SNRPC	100	87.421	Ovis_aries
ENSCGRG00001021483	-	100	85.535	ENSPPAG00000043871	SNRPC	100	87.421	Pan_paniscus
ENSCGRG00001021483	-	95	57.516	ENSPPRG00000016017	-	66	55.000	Panthera_pardus
ENSCGRG00001021483	-	100	85.535	ENSPPRG00000008647	-	100	87.421	Panthera_pardus
ENSCGRG00001021483	-	97	49.677	ENSPTIG00000013329	-	50	62.338	Panthera_tigris_altaica
ENSCGRG00001021483	-	100	85.535	ENSPTIG00000021867	-	100	87.421	Panthera_tigris_altaica
ENSCGRG00001021483	-	100	85.535	ENSPTRG00000018070	SNRPC	100	87.421	Pan_troglodytes
ENSCGRG00001021483	-	100	85.535	ENSPANG00000022802	-	100	87.421	Papio_anubis
ENSCGRG00001021483	-	100	74.214	ENSPANG00000018228	-	94	77.358	Papio_anubis
ENSCGRG00001021483	-	55	62.766	ENSPKIG00000003136	snrpc	50	69.231	Paramormyrops_kingsleyae
ENSCGRG00001021483	-	100	71.250	ENSPKIG00000001671	SNRPC	100	67.500	Paramormyrops_kingsleyae
ENSCGRG00001021483	-	99	81.529	ENSPSIG00000004876	SNRPC	77	83.439	Pelodiscus_sinensis
ENSCGRG00001021483	-	99	58.042	ENSPMGG00000022162	snrpc	50	67.143	Periophthalmus_magnuspinnatus
ENSCGRG00001021483	-	100	74.684	ENSPEMG00000002763	-	100	73.585	Peromyscus_maniculatus_bairdii
ENSCGRG00001021483	-	100	81.761	ENSPEMG00000010773	Snrpc	100	88.050	Peromyscus_maniculatus_bairdii
ENSCGRG00001021483	-	100	84.277	ENSPCAG00000016885	SNRPC	90	86.624	Procavia_capensis
ENSCGRG00001021483	-	100	85.535	ENSPCOG00000004904	SNRPC	100	87.421	Propithecus_coquereli
ENSCGRG00001021483	-	100	83.019	ENSPVAG00000015597	SNRPC	87	85.987	Pteropus_vampyrus
ENSCGRG00001021483	-	100	81.761	ENSRNOG00000000493	Snrpc	100	88.050	Rattus_norvegicus
ENSCGRG00001021483	-	100	85.535	ENSRBIG00000037567	-	100	87.421	Rhinopithecus_bieti
ENSCGRG00001021483	-	100	84.906	ENSRBIG00000014819	-	100	86.792	Rhinopithecus_bieti
ENSCGRG00001021483	-	100	76.101	ENSRBIG00000036353	-	83	78.616	Rhinopithecus_bieti
ENSCGRG00001021483	-	100	84.906	ENSRBIG00000022998	-	100	86.792	Rhinopithecus_bieti
ENSCGRG00001021483	-	100	85.535	ENSRROG00000041300	SNRPC	100	87.421	Rhinopithecus_roxellana
ENSCGRG00001021483	-	100	85.535	ENSSBOG00000031528	-	100	87.421	Saimiri_boliviensis_boliviensis
ENSCGRG00001021483	-	98	70.513	ENSSBOG00000023189	-	91	70.513	Saimiri_boliviensis_boliviensis
ENSCGRG00001021483	-	94	81.119	ENSSBOG00000032361	-	66	78.409	Saimiri_boliviensis_boliviensis
ENSCGRG00001021483	-	98	71.831	ENSSBOG00000032882	-	93	69.872	Saimiri_boliviensis_boliviensis
ENSCGRG00001021483	-	99	84.076	ENSSHAG00000000945	-	87	85.987	Sarcophilus_harrisii
ENSCGRG00001021483	-	100	56.954	ENSSHAG00000002972	-	100	57.862	Sarcophilus_harrisii
ENSCGRG00001021483	-	100	70.440	ENSSFOG00015019150	snrpc	100	70.440	Scleropages_formosus
ENSCGRG00001021483	-	63	64.762	ENSSFOG00015022422	snrpc	79	69.355	Scleropages_formosus
ENSCGRG00001021483	-	100	60.377	ENSSARG00000008970	SNRPC	89	63.522	Sorex_araneus
ENSCGRG00001021483	-	100	83.648	ENSSPUG00000002502	SNRPC	100	85.535	Sphenodon_punctatus
ENSCGRG00001021483	-	100	85.535	ENSSSCG00000001531	SNRPC	100	87.421	Sus_scrofa
ENSCGRG00001021483	-	100	83.019	ENSTGUG00000001773	SNRPC	99	85.443	Taeniopygia_guttata
ENSCGRG00001021483	-	100	58.503	ENSTRUG00000021651	snrpc	51	66.667	Takifugu_rubripes
ENSCGRG00001021483	-	100	61.111	ENSTNIG00000018307	snrpc	100	62.733	Tetraodon_nigroviridis
ENSCGRG00001021483	-	98	76.282	ENSTBEG00000013022	-	100	79.487	Tupaia_belangeri
ENSCGRG00001021483	-	98	60.256	ENSTBEG00000015356	-	55	68.831	Tupaia_belangeri
ENSCGRG00001021483	-	100	83.648	ENSTTRG00000007827	SNRPC	86	86.624	Tursiops_truncatus
ENSCGRG00001021483	-	57	77.083	ENSUAMG00000014125	SNRPC	52	74.026	Ursus_americanus
ENSCGRG00001021483	-	100	65.730	ENSUMAG00000010869	SNRPC	100	74.157	Ursus_maritimus
ENSCGRG00001021483	-	88	57.746	ENSVPAG00000003106	SNRPC	79	61.268	Vicugna_pacos
ENSCGRG00001021483	-	100	84.277	ENSVVUG00000021947	-	100	86.164	Vulpes_vulpes
ENSCGRG00001021483	-	97	80.519	ENSVVUG00000010467	-	87	82.692	Vulpes_vulpes
ENSCGRG00001021483	-	100	74.843	ENSXETG00000024721	snrpc	100	77.358	Xenopus_tropicalis