EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00001021647 (Gene tree)
Gene ID: -
Gene Symbol: Prdm10
Alias: LOC382066|tristanin
Full Name: PR/SET domain 10
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Plus strand
Length: 113824 bases
Position: chrscaffold_30:14503656-14617479
Accession: 100756394
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001023430	zf-C2H2	PF00096.26	3.6e-33	1	5
ENSCGRP00001023430	zf-C2H2	PF00096.26	3.6e-33	2	5
ENSCGRP00001023430	zf-C2H2	PF00096.26	3.6e-33	3	5
ENSCGRP00001023430	zf-C2H2	PF00096.26	3.6e-33	4	5
ENSCGRP00001023430	zf-C2H2	PF00096.26	3.6e-33	5	5
ENSCGRP00001023442	zf-C2H2	PF00096.26	3e-25	1	4
ENSCGRP00001023442	zf-C2H2	PF00096.26	3e-25	2	4
ENSCGRP00001023442	zf-C2H2	PF00096.26	3e-25	3	4
ENSCGRP00001023442	zf-C2H2	PF00096.26	3e-25	4	4
ENSCGRP00001023442	zf-met	PF12874.7	3.7e-09	1	2
ENSCGRP00001023442	zf-met	PF12874.7	3.7e-09	2	2
ENSCGRP00001023430	zf-met	PF12874.7	6.1e-06	1	2
ENSCGRP00001023430	zf-met	PF12874.7	6.1e-06	2	2
ENSCGRP00001023430	zf-C2H2_jaz	PF12171.8	6.4e-17	1	1
ENSCGRP00001023442	zf-C2H2_jaz	PF12171.8	1.3e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001027676	-	7841	-	ENSCGRP00001023430	1166 (aa)	XP_007642730	UPI000454B9FC
ENSCGRT00001027688	-	3354	-	ENSCGRP00001023442	1117 (aa)	-	-

Gene Model

Click here to download ENSCGRG00001021647's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001021647's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00001021647	Prdm10	61	30.168	ENSCGRG00001010581	Prdm5	78	36.813

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001021647	Prdm10	98	92.494	ENSG00000170325	PRDM10	100	94.335	Homo_sapiens
ENSCGRG00001021647	Prdm10	98	96.053	ENSAMEG00000002425	PRDM10	100	88.314	Ailuropoda_melanoleuca
ENSCGRG00001021647	Prdm10	98	83.376	ENSAPLG00000004858	PRDM10	100	83.376	Anas_platyrhynchos
ENSCGRG00001021647	Prdm10	91	85.067	ENSANAG00000022064	PRDM10	100	77.711	Aotus_nancymaae
ENSCGRG00001021647	Prdm10	98	91.263	ENSBTAG00000019001	PRDM10	100	91.947	Bos_taurus
ENSCGRG00001021647	Prdm10	98	92.660	ENSCJAG00000009235	PRDM10	100	92.660	Callithrix_jacchus
ENSCGRG00001021647	Prdm10	98	91.725	ENSCAFG00000010164	PRDM10	100	91.725	Canis_familiaris
ENSCGRG00001021647	Prdm10	100	89.525	ENSCAFG00020010152	PRDM10	96	98.667	Canis_lupus_dingo
ENSCGRG00001021647	Prdm10	98	91.522	ENSCHIG00000026530	PRDM10	100	91.169	Capra_hircus
ENSCGRG00001021647	Prdm10	98	93.184	ENSTSYG00000000544	PRDM10	100	93.270	Carlito_syrichta
ENSCGRG00001021647	Prdm10	98	85.185	ENSCAPG00000017296	PRDM10	100	85.357	Cavia_aperea
ENSCGRG00001021647	Prdm10	99	84.541	ENSCPOG00000000389	PRDM10	98	86.083	Cavia_porcellus
ENSCGRG00001021647	Prdm10	98	92.401	ENSCCAG00000024567	PRDM10	100	92.573	Cebus_capucinus
ENSCGRG00001021647	Prdm10	98	93.086	ENSCATG00000040031	PRDM10	100	93.258	Cercocebus_atys
ENSCGRG00001021647	Prdm10	99	91.478	ENSCLAG00000014605	PRDM10	99	97.436	Chinchilla_lanigera
ENSCGRG00001021647	Prdm10	98	93.086	ENSCSAG00000002202	PRDM10	100	93.345	Chlorocebus_sabaeus
ENSCGRG00001021647	Prdm10	97	84.501	ENSCPBG00000026880	PRDM10	99	80.480	Chrysemys_picta_bellii
ENSCGRG00001021647	Prdm10	98	92.832	ENSCANG00000032669	PRDM10	100	93.005	Colobus_angolensis_palliatus
ENSCGRG00001021647	Prdm10	100	100.000	ENSCGRG00000006562	Prdm10	100	100.000	Cricetulus_griseus_crigri
ENSCGRG00001021647	Prdm10	80	90.957	ENSDNOG00000001366	PRDM10	95	90.957	Dasypus_novemcinctus
ENSCGRG00001021647	Prdm10	98	93.380	ENSDORG00000014292	Prdm10	100	93.293	Dipodomys_ordii
ENSCGRG00001021647	Prdm10	96	100.000	ENSEASG00005022914	PRDM10	100	92.042	Equus_asinus_asinus
ENSCGRG00001021647	Prdm10	96	100.000	ENSECAG00000011499	PRDM10	100	91.955	Equus_caballus
ENSCGRG00001021647	Prdm10	96	91.975	ENSFCAG00000004111	PRDM10	96	91.975	Felis_catus
ENSCGRG00001021647	Prdm10	97	84.455	ENSFALG00000004873	PRDM10	100	79.733	Ficedula_albicollis
ENSCGRG00001021647	Prdm10	98	96.154	ENSFDAG00000017311	PRDM10	100	91.652	Fukomys_damarensis
ENSCGRG00001021647	Prdm10	97	84.995	ENSGALG00000033660	PRDM10	99	83.541	Gallus_gallus
ENSCGRG00001021647	Prdm10	99	64.655	ENSGACG00000012293	prdm10	99	67.949	Gasterosteus_aculeatus
ENSCGRG00001021647	Prdm10	97	83.333	ENSGAGG00000012523	PRDM10	99	81.772	Gopherus_agassizii
ENSCGRG00001021647	Prdm10	98	93.658	ENSGGOG00000015359	PRDM10	100	93.576	Gorilla_gorilla
ENSCGRG00001021647	Prdm10	99	92.683	ENSHGLG00000001106	PRDM10	99	92.683	Heterocephalus_glaber_female
ENSCGRG00001021647	Prdm10	99	92.683	ENSHGLG00100002350	PRDM10	100	91.688	Heterocephalus_glaber_male
ENSCGRG00001021647	Prdm10	98	93.351	ENSSTOG00000002015	PRDM10	100	93.696	Ictidomys_tridecemlineatus
ENSCGRG00001021647	Prdm10	80	92.722	ENSJJAG00000021493	Prdm10	90	92.141	Jaculus_jaculus
ENSCGRG00001021647	Prdm10	98	88.336	ENSLAFG00000031867	PRDM10	100	88.165	Loxodonta_africana
ENSCGRG00001021647	Prdm10	98	92.999	ENSMFAG00000031008	PRDM10	100	93.172	Macaca_fascicularis
ENSCGRG00001021647	Prdm10	98	92.999	ENSMMUG00000017555	PRDM10	100	93.172	Macaca_mulatta
ENSCGRG00001021647	Prdm10	98	92.913	ENSMNEG00000036493	PRDM10	100	93.086	Macaca_nemestrina
ENSCGRG00001021647	Prdm10	92	86.434	ENSMLEG00000042028	PRDM10	100	86.811	Mandrillus_leucophaeus
ENSCGRG00001021647	Prdm10	97	84.851	ENSMGAG00000001112	PRDM10	100	80.634	Meleagris_gallopavo
ENSCGRG00001021647	Prdm10	98	92.740	ENSMICG00000013888	PRDM10	100	92.913	Microcebus_murinus
ENSCGRG00001021647	Prdm10	98	95.652	ENSMOCG00000021853	Prdm10	99	97.403	Microtus_ochrogaster
ENSCGRG00001021647	Prdm10	80	83.680	ENSMODG00000004979	PRDM10	99	86.168	Monodelphis_domestica
ENSCGRG00001021647	Prdm10	100	93.926	ENSMUSG00000042496	Prdm10	100	95.055	Mus_musculus
ENSCGRG00001021647	Prdm10	98	96.872	MGP_SPRETEiJ_G0033061	-	100	96.872	Mus_spretus
ENSCGRG00001021647	Prdm10	99	90.716	ENSMPUG00000008711	PRDM10	99	90.716	Mustela_putorius_furo
ENSCGRG00001021647	Prdm10	98	91.027	ENSMLUG00000013051	PRDM10	100	90.854	Myotis_lucifugus
ENSCGRG00001021647	Prdm10	98	95.990	ENSNGAG00000000580	Prdm10	100	95.990	Nannospalax_galili
ENSCGRG00001021647	Prdm10	98	92.999	ENSNLEG00000007488	PRDM10	100	93.172	Nomascus_leucogenys
ENSCGRG00001021647	Prdm10	99	90.425	ENSODEG00000005309	PRDM10	100	90.094	Octodon_degus
ENSCGRG00001021647	Prdm10	98	79.247	ENSOANG00000000577	-	100	77.021	Ornithorhynchus_anatinus
ENSCGRG00001021647	Prdm10	98	91.429	ENSOCUG00000003736	PRDM10	100	91.429	Oryctolagus_cuniculus
ENSCGRG00001021647	Prdm10	98	91.731	ENSOGAG00000010723	PRDM10	100	91.731	Otolemur_garnettii
ENSCGRG00001021647	Prdm10	98	91.522	ENSOARG00000014507	PRDM10	100	91.169	Ovis_aries
ENSCGRG00001021647	Prdm10	98	93.484	ENSPPAG00000042881	PRDM10	100	93.403	Pan_paniscus
ENSCGRG00001021647	Prdm10	98	91.696	ENSPPRG00000007002	PRDM10	100	91.696	Panthera_pardus
ENSCGRG00001021647	Prdm10	98	91.609	ENSPTIG00000013331	PRDM10	100	91.609	Panthera_tigris_altaica
ENSCGRG00001021647	Prdm10	98	93.745	ENSPTRG00000004477	PRDM10	100	93.663	Pan_troglodytes
ENSCGRG00001021647	Prdm10	98	92.913	ENSPANG00000017470	PRDM10	100	93.086	Papio_anubis
ENSCGRG00001021647	Prdm10	99	95.174	ENSPEMG00000014985	Prdm10	100	96.062	Peromyscus_maniculatus_bairdii
ENSCGRG00001021647	Prdm10	98	92.839	ENSPPYG00000004061	PRDM10	100	92.925	Pongo_abelii
ENSCGRG00001021647	Prdm10	90	94.545	ENSPCAG00000014514	PRDM10	93	94.545	Procavia_capensis
ENSCGRG00001021647	Prdm10	98	79.483	ENSPCOG00000023406	PRDM10	100	79.741	Propithecus_coquereli
ENSCGRG00001021647	Prdm10	98	92.328	ENSPVAG00000012764	PRDM10	100	92.069	Pteropus_vampyrus
ENSCGRG00001021647	Prdm10	98	97.472	ENSRNOG00000007853	Prdm10	100	97.472	Rattus_norvegicus
ENSCGRG00001021647	Prdm10	98	92.839	ENSRBIG00000030924	PRDM10	100	92.925	Rhinopithecus_bieti
ENSCGRG00001021647	Prdm10	98	92.839	ENSRROG00000034334	PRDM10	100	92.925	Rhinopithecus_roxellana
ENSCGRG00001021647	Prdm10	98	92.494	ENSSBOG00000008773	PRDM10	100	92.580	Saimiri_boliviensis_boliviensis
ENSCGRG00001021647	Prdm10	98	85.052	ENSSHAG00000004503	PRDM10	99	85.567	Sarcophilus_harrisii
ENSCGRG00001021647	Prdm10	68	100.000	ENSSARG00000013953	-	68	100.000	Sorex_araneus
ENSCGRG00001021647	Prdm10	98	81.613	ENSSPUG00000001178	PRDM10	97	84.754	Sphenodon_punctatus
ENSCGRG00001021647	Prdm10	98	96.203	ENSSSCG00000015243	PRDM10	100	92.103	Sus_scrofa
ENSCGRG00001021647	Prdm10	98	82.560	ENSTGUG00000000530	PRDM10	100	82.560	Taeniopygia_guttata
ENSCGRG00001021647	Prdm10	93	88.132	ENSTBEG00000007221	PRDM10	94	88.132	Tupaia_belangeri
ENSCGRG00001021647	Prdm10	98	89.819	ENSTTRG00000009189	PRDM10	100	89.129	Tursiops_truncatus
ENSCGRG00001021647	Prdm10	92	89.662	ENSUAMG00000018832	PRDM10	92	96.104	Ursus_americanus
ENSCGRG00001021647	Prdm10	99	91.070	ENSUMAG00000003167	PRDM10	97	94.805	Ursus_maritimus
ENSCGRG00001021647	Prdm10	98	91.522	ENSVVUG00000019878	PRDM10	100	91.522	Vulpes_vulpes
ENSCGRG00001021647	Prdm10	99	71.526	ENSXETG00000032173	PRDM10	100	68.390	Xenopus_tropicalis