EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00001021763 (Gene tree)
Gene ID: -
Gene Symbol: Cirbp
Alias: A18 hnRNP|CIRP
Full Name: cold inducible RNA binding protein
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Plus strand
Length: 110775 bases
Position: chrscaffold_1:102002485-102113259
Accession: 100689075
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001023603	RRM_1	PF00076.22	1.3e-36	1	2
ENSCGRP00001023603	RRM_1	PF00076.22	1.3e-36	2	2
ENSCGRP00001023579	RRM_1	PF00076.22	4.1e-31	1	2
ENSCGRP00001023579	RRM_1	PF00076.22	4.1e-31	2	2
ENSCGRP00001023586	RRM_1	PF00076.22	6.7e-26	1	1
ENSCGRP00001023590	RRM_1	PF00076.22	7.1e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001027849	-	1221	-	ENSCGRP00001023603	406 (aa)	XP_016831159	UPI0007DA8D15
ENSCGRT00001027832	-	507	-	ENSCGRP00001023586	168 (aa)	-	UPI000058A012
ENSCGRT00001027836	-	519	-	ENSCGRP00001023590	172 (aa)	XP_016831142	P60826
ENSCGRT00001027825	-	1164	-	ENSCGRP00001023579	387 (aa)	-	-

Gene Model

Click here to download ENSCGRG00001021763's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001021763's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00001021763	Cirbp	51	38.372	ENSCGRG00001000392	-	53	40.789
ENSCGRG00001021763	Cirbp	51	32.184	ENSCGRG00001006656	-	52	32.184
ENSCGRG00001021763	Cirbp	51	37.500	ENSCGRG00001018927	Elavl3	62	37.500
ENSCGRG00001021763	Cirbp	51	41.063	ENSCGRG00001018883	Msi1	52	41.063
ENSCGRG00001021763	Cirbp	50	51.064	ENSCGRG00001013330	Msi2	78	51.064
ENSCGRG00001021763	Cirbp	53	37.097	ENSCGRG00001013676	Elavl1	75	33.333
ENSCGRG00001021763	Cirbp	52	32.955	ENSCGRG00001014666	-	67	32.955
ENSCGRG00001021763	Cirbp	65	38.614	ENSCGRG00001022416	-	66	44.737
ENSCGRG00001021763	Cirbp	51	40.698	ENSCGRG00001013129	-	60	36.275
ENSCGRG00001021763	Cirbp	60	38.614	ENSCGRG00001008592	Hnrnpa3	81	44.737
ENSCGRG00001021763	Cirbp	99	64.706	ENSCGRG00001018909	Rbm3	100	64.118
ENSCGRG00001021763	Cirbp	83	37.113	ENSCGRG00001014634	Hnrnpd	62	37.273
ENSCGRG00001021763	Cirbp	55	38.889	ENSCGRG00001020348	Elavl4	70	38.889
ENSCGRG00001021763	Cirbp	63	38.095	ENSCGRG00001005548	Hnrnpa0	63	34.118
ENSCGRG00001021763	Cirbp	50	34.884	ENSCGRG00001010684	-	56	33.508
ENSCGRG00001021763	Cirbp	54	31.111	ENSCGRG00001022756	-	57	31.111
ENSCGRG00001021763	Cirbp	58	33.673	ENSCGRG00001000756	-	54	30.319
ENSCGRG00001021763	Cirbp	55	36.559	ENSCGRG00001013417	Tia1	63	37.363
ENSCGRG00001021763	Cirbp	58	34.694	ENSCGRG00001010070	-	58	30.928
ENSCGRG00001021763	Cirbp	56	38.372	ENSCGRG00001012762	Tial1	68	38.824
ENSCGRG00001021763	Cirbp	52	32.955	ENSCGRG00001024550	-	51	32.955

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001021763	Cirbp	100	98.276	ENSG00000071626	DAZAP1	100	98.276	Homo_sapiens
ENSCGRG00001021763	Cirbp	99	71.883	ENSAPOG00000021971	dazap1	99	66.015	Acanthochromis_polyacanthus
ENSCGRG00001021763	Cirbp	99	89.195	ENSAMEG00000003364	DAZAP1	99	89.195	Ailuropoda_melanoleuca
ENSCGRG00001021763	Cirbp	99	71.571	ENSACIG00000004322	dazap1	98	65.578	Amphilophus_citrinellus
ENSCGRG00001021763	Cirbp	99	71.883	ENSAOCG00000020107	dazap1	99	66.015	Amphiprion_ocellaris
ENSCGRG00001021763	Cirbp	99	71.883	ENSAPEG00000005289	dazap1	99	66.015	Amphiprion_percula
ENSCGRG00001021763	Cirbp	99	72.019	ENSATEG00000016043	dazap1	99	66.015	Anabas_testudineus
ENSCGRG00001021763	Cirbp	99	86.520	ENSAPLG00000005606	DAZAP1	99	87.376	Anas_platyrhynchos
ENSCGRG00001021763	Cirbp	59	38.667	ENSACAG00000005366	-	100	98.266	Anolis_carolinensis
ENSCGRG00001021763	Cirbp	100	97.543	ENSANAG00000036160	DAZAP1	100	97.543	Aotus_nancymaae
ENSCGRG00001021763	Cirbp	99	72.637	ENSACLG00000023187	dazap1	98	66.750	Astatotilapia_calliptera
ENSCGRG00001021763	Cirbp	99	73.723	ENSAMXG00000019066	dazap1	97	67.726	Astyanax_mexicanus
ENSCGRG00001021763	Cirbp	100	97.052	ENSBTAG00000019714	DAZAP1	100	97.052	Bos_taurus
ENSCGRG00001021763	Cirbp	54	38.824	WBGene00001999	hrp-1	80	37.143	Caenorhabditis_elegans
ENSCGRG00001021763	Cirbp	100	98.034	ENSCJAG00000005609	DAZAP1	100	98.034	Callithrix_jacchus
ENSCGRG00001021763	Cirbp	100	97.543	ENSCAFG00000019528	DAZAP1	100	97.543	Canis_familiaris
ENSCGRG00001021763	Cirbp	100	97.297	ENSCAFG00020017166	DAZAP1	100	97.297	Canis_lupus_dingo
ENSCGRG00001021763	Cirbp	98	97.481	ENSCHIG00000024694	DAZAP1	98	97.481	Capra_hircus
ENSCGRG00001021763	Cirbp	98	98.237	ENSTSYG00000027054	DAZAP1	100	98.237	Carlito_syrichta
ENSCGRG00001021763	Cirbp	98	98.232	ENSCAPG00000008229	DAZAP1	100	98.232	Cavia_aperea
ENSCGRG00001021763	Cirbp	98	94.444	ENSCPOG00000020185	DAZAP1	100	98.883	Cavia_porcellus
ENSCGRG00001021763	Cirbp	100	97.789	ENSCCAG00000023519	DAZAP1	100	97.789	Cebus_capucinus
ENSCGRG00001021763	Cirbp	100	98.034	ENSCATG00000029559	DAZAP1	100	98.034	Cercocebus_atys
ENSCGRG00001021763	Cirbp	98	95.970	ENSCLAG00000009221	DAZAP1	100	100.000	Chinchilla_lanigera
ENSCGRG00001021763	Cirbp	100	98.034	ENSCSAG00000012126	DAZAP1	100	98.034	Chlorocebus_sabaeus
ENSCGRG00001021763	Cirbp	98	93.782	ENSCPBG00000022951	DAZAP1	96	86.740	Chrysemys_picta_bellii
ENSCGRG00001021763	Cirbp	51	48.045	ENSCING00000022958	-	99	48.045	Ciona_intestinalis
ENSCGRG00001021763	Cirbp	65	34.783	ENSCSAVG00000001118	-	57	41.410	Ciona_savignyi
ENSCGRG00001021763	Cirbp	63	31.250	ENSCSAVG00000004457	-	96	50.000	Ciona_savignyi
ENSCGRG00001021763	Cirbp	98	98.489	ENSCANG00000040380	DAZAP1	100	98.489	Colobus_angolensis_palliatus
ENSCGRG00001021763	Cirbp	98	99.497	ENSCGRG00000017446	Dazap1	100	99.497	Cricetulus_griseus_crigri
ENSCGRG00001021763	Cirbp	99	68.613	ENSCSEG00000018162	dazap1	98	62.953	Cynoglossus_semilaevis
ENSCGRG00001021763	Cirbp	99	70.316	ENSCVAG00000018607	dazap1	99	64.792	Cyprinodon_variegatus
ENSCGRG00001021763	Cirbp	100	69.231	ENSDARG00000070846	dazap1	100	86.452	Danio_rerio
ENSCGRG00001021763	Cirbp	98	97.534	ENSDNOG00000046404	DAZAP1	100	97.534	Dasypus_novemcinctus
ENSCGRG00001021763	Cirbp	98	97.733	ENSDORG00000010038	Dazap1	100	97.733	Dipodomys_ordii
ENSCGRG00001021763	Cirbp	55	46.835	FBgn0004838	Hrb27C	52	48.276	Drosophila_melanogaster
ENSCGRG00001021763	Cirbp	100	97.297	ENSETEG00000008636	DAZAP1	100	97.297	Echinops_telfairi
ENSCGRG00001021763	Cirbp	100	49.333	ENSEBUG00000014319	dazap1	59	66.284	Eptatretus_burgeri
ENSCGRG00001021763	Cirbp	100	97.297	ENSEASG00005021718	DAZAP1	100	97.297	Equus_asinus_asinus
ENSCGRG00001021763	Cirbp	100	97.297	ENSECAG00000011805	DAZAP1	100	97.297	Equus_caballus
ENSCGRG00001021763	Cirbp	100	72.289	ENSELUG00000010286	dazap1	100	67.312	Esox_lucius
ENSCGRG00001021763	Cirbp	100	97.543	ENSFCAG00000010767	DAZAP1	100	97.543	Felis_catus
ENSCGRG00001021763	Cirbp	99	86.946	ENSFALG00000014010	DAZAP1	99	87.841	Ficedula_albicollis
ENSCGRG00001021763	Cirbp	98	97.733	ENSFDAG00000001283	DAZAP1	99	97.733	Fukomys_damarensis
ENSCGRG00001021763	Cirbp	99	70.631	ENSFHEG00000016786	dazap1	99	65.037	Fundulus_heteroclitus
ENSCGRG00001021763	Cirbp	85	71.629	ENSGMOG00000001142	dazap1	99	63.687	Gadus_morhua
ENSCGRG00001021763	Cirbp	100	87.317	ENSGALG00000015200	DAZAP1	100	88.049	Gallus_gallus
ENSCGRG00001021763	Cirbp	99	70.388	ENSGACG00000008259	dazap1	86	78.947	Gasterosteus_aculeatus
ENSCGRG00001021763	Cirbp	99	93.207	ENSGAGG00000014290	DAZAP1	100	88.315	Gopherus_agassizii
ENSCGRG00001021763	Cirbp	100	98.034	ENSGGOG00000002814	DAZAP1	100	98.034	Gorilla_gorilla
ENSCGRG00001021763	Cirbp	99	71.883	ENSHBUG00000014707	dazap1	99	66.259	Haplochromis_burtoni
ENSCGRG00001021763	Cirbp	100	97.543	ENSHGLG00000017518	DAZAP1	100	97.543	Heterocephalus_glaber_female
ENSCGRG00001021763	Cirbp	98	95.718	ENSHGLG00100002588	DAZAP1	99	95.718	Heterocephalus_glaber_male
ENSCGRG00001021763	Cirbp	99	70.149	ENSHCOG00000008541	dazap1	98	64.750	Hippocampus_comes
ENSCGRG00001021763	Cirbp	100	74.453	ENSIPUG00000006899	dazap1	97	69.438	Ictalurus_punctatus
ENSCGRG00001021763	Cirbp	98	96.717	ENSSTOG00000006401	DAZAP1	100	96.717	Ictidomys_tridecemlineatus
ENSCGRG00001021763	Cirbp	100	98.276	ENSJJAG00000000715	Dazap1	100	98.276	Jaculus_jaculus
ENSCGRG00001021763	Cirbp	99	72.019	ENSKMAG00000005673	dazap1	99	66.015	Kryptolebias_marmoratus
ENSCGRG00001021763	Cirbp	99	70.803	ENSLBEG00000000569	dazap1	99	65.281	Labrus_bergylta
ENSCGRG00001021763	Cirbp	100	76.225	ENSLACG00000009693	DAZAP1	100	72.482	Latimeria_chalumnae
ENSCGRG00001021763	Cirbp	100	75.182	ENSLOCG00000002243	dazap1	100	70.560	Lepisosteus_oculatus
ENSCGRG00001021763	Cirbp	100	97.297	ENSLAFG00000018103	DAZAP1	100	97.297	Loxodonta_africana
ENSCGRG00001021763	Cirbp	98	98.489	ENSMFAG00000000789	DAZAP1	100	98.489	Macaca_fascicularis
ENSCGRG00001021763	Cirbp	100	96.560	ENSMMUG00000003047	DAZAP1	100	96.560	Macaca_mulatta
ENSCGRG00001021763	Cirbp	100	98.034	ENSMNEG00000040014	DAZAP1	100	98.034	Macaca_nemestrina
ENSCGRG00001021763	Cirbp	98	98.489	ENSMLEG00000035079	DAZAP1	100	98.489	Mandrillus_leucophaeus
ENSCGRG00001021763	Cirbp	99	71.290	ENSMAMG00000005746	dazap1	99	65.281	Mastacembelus_armatus
ENSCGRG00001021763	Cirbp	99	71.883	ENSMZEG00005016739	dazap1	99	66.259	Maylandia_zebra
ENSCGRG00001021763	Cirbp	100	99.263	ENSMAUG00000012188	Dazap1	100	99.415	Mesocricetus_auratus
ENSCGRG00001021763	Cirbp	100	98.034	ENSMICG00000003579	DAZAP1	100	98.034	Microcebus_murinus
ENSCGRG00001021763	Cirbp	100	99.263	ENSMOCG00000016931	Dazap1	100	99.415	Microtus_ochrogaster
ENSCGRG00001021763	Cirbp	99	69.744	ENSMMOG00000007638	dazap1	100	63.846	Mola_mola
ENSCGRG00001021763	Cirbp	100	96.314	ENSMODG00000005157	DAZAP1	100	96.314	Monodelphis_domestica
ENSCGRG00001021763	Cirbp	100	69.438	ENSMALG00000018607	dazap1	100	64.059	Monopterus_albus
ENSCGRG00001021763	Cirbp	100	99.754	MGP_CAROLIEiJ_G0015574	Dazap1	100	99.754	Mus_caroli
ENSCGRG00001021763	Cirbp	100	99.754	ENSMUSG00000069565	Dazap1	100	99.754	Mus_musculus
ENSCGRG00001021763	Cirbp	100	99.754	MGP_PahariEiJ_G0030987	Dazap1	100	99.754	Mus_pahari
ENSCGRG00001021763	Cirbp	100	99.754	MGP_SPRETEiJ_G0016392	Dazap1	100	99.754	Mus_spretus
ENSCGRG00001021763	Cirbp	98	97.733	ENSMPUG00000008203	DAZAP1	87	97.733	Mustela_putorius_furo
ENSCGRG00001021763	Cirbp	99	95.833	ENSMLUG00000014975	DAZAP1	100	95.833	Myotis_lucifugus
ENSCGRG00001021763	Cirbp	100	99.261	ENSNGAG00000003560	Dazap1	100	99.261	Nannospalax_galili
ENSCGRG00001021763	Cirbp	99	62.972	ENSNBRG00000004605	dazap1	68	82.203	Neolamprologus_brichardi
ENSCGRG00001021763	Cirbp	98	98.237	ENSNLEG00000001563	DAZAP1	100	98.237	Nomascus_leucogenys
ENSCGRG00001021763	Cirbp	98	80.353	ENSMEUG00000011717	DAZAP1	100	80.353	Notamacropus_eugenii
ENSCGRG00001021763	Cirbp	98	97.985	ENSODEG00000013797	DAZAP1	99	97.985	Octodon_degus
ENSCGRG00001021763	Cirbp	99	66.440	ENSONIG00000012689	dazap1	99	61.224	Oreochromis_niloticus
ENSCGRG00001021763	Cirbp	100	92.383	ENSOANG00000014632	DAZAP1	100	92.383	Ornithorhynchus_anatinus
ENSCGRG00001021763	Cirbp	99	70.560	ENSORLG00000008278	dazap1	99	64.548	Oryzias_latipes
ENSCGRG00001021763	Cirbp	88	72.131	ENSORLG00020015195	dazap1	94	65.110	Oryzias_latipes_hni
ENSCGRG00001021763	Cirbp	99	66.287	ENSORLG00015010671	dazap1	99	60.592	Oryzias_latipes_hsok
ENSCGRG00001021763	Cirbp	99	71.533	ENSOMEG00000003120	dazap1	99	65.037	Oryzias_melastigma
ENSCGRG00001021763	Cirbp	99	97.264	ENSOGAG00000000232	DAZAP1	99	97.264	Otolemur_garnettii
ENSCGRG00001021763	Cirbp	98	94.962	ENSOARG00000011726	DAZAP1	98	94.962	Ovis_aries
ENSCGRG00001021763	Cirbp	98	98.489	ENSPPAG00000033205	DAZAP1	100	98.489	Pan_paniscus
ENSCGRG00001021763	Cirbp	100	97.543	ENSPPRG00000012584	DAZAP1	100	97.543	Panthera_pardus
ENSCGRG00001021763	Cirbp	86	92.604	ENSPTIG00000012046	DAZAP1	92	95.266	Panthera_tigris_altaica
ENSCGRG00001021763	Cirbp	100	98.034	ENSPTRG00000010199	DAZAP1	100	98.034	Pan_troglodytes
ENSCGRG00001021763	Cirbp	100	98.034	ENSPANG00000004638	DAZAP1	100	98.034	Papio_anubis
ENSCGRG00001021763	Cirbp	99	73.839	ENSPKIG00000007696	dazap1	99	67.726	Paramormyrops_kingsleyae
ENSCGRG00001021763	Cirbp	98	93.719	ENSPSIG00000002760	DAZAP1	100	89.196	Pelodiscus_sinensis
ENSCGRG00001021763	Cirbp	99	68.782	ENSPMGG00000020522	dazap1	100	63.171	Periophthalmus_magnuspinnatus
ENSCGRG00001021763	Cirbp	99	98.519	ENSPEMG00000022548	Dazap1	100	99.244	Peromyscus_maniculatus_bairdii
ENSCGRG00001021763	Cirbp	100	96.314	ENSPCIG00000011156	DAZAP1	100	96.314	Phascolarctos_cinereus
ENSCGRG00001021763	Cirbp	99	71.290	ENSPFOG00000002387	dazap1	99	66.015	Poecilia_formosa
ENSCGRG00001021763	Cirbp	99	71.290	ENSPLAG00000008336	dazap1	99	66.015	Poecilia_latipinna
ENSCGRG00001021763	Cirbp	99	71.046	ENSPMEG00000014575	dazap1	99	65.770	Poecilia_mexicana
ENSCGRG00001021763	Cirbp	99	69.697	ENSPREG00000011049	dazap1	100	64.213	Poecilia_reticulata
ENSCGRG00001021763	Cirbp	100	98.034	ENSPPYG00000009316	DAZAP1	100	98.034	Pongo_abelii
ENSCGRG00001021763	Cirbp	55	96.172	ENSPCAG00000006539	DAZAP1	90	96.651	Procavia_capensis
ENSCGRG00001021763	Cirbp	100	98.034	ENSPCOG00000028522	DAZAP1	100	98.034	Propithecus_coquereli
ENSCGRG00001021763	Cirbp	100	97.297	ENSPVAG00000003169	DAZAP1	100	97.297	Pteropus_vampyrus
ENSCGRG00001021763	Cirbp	99	71.883	ENSPNYG00000017318	dazap1	99	66.259	Pundamilia_nyererei
ENSCGRG00001021763	Cirbp	99	73.723	ENSPNAG00000011639	dazap1	97	67.971	Pygocentrus_nattereri
ENSCGRG00001021763	Cirbp	100	99.507	ENSRNOG00000031387	Dazap1	100	99.507	Rattus_norvegicus
ENSCGRG00001021763	Cirbp	98	97.985	ENSRBIG00000032485	DAZAP1	100	97.985	Rhinopithecus_bieti
ENSCGRG00001021763	Cirbp	98	98.087	ENSRROG00000037347	DAZAP1	100	98.087	Rhinopithecus_roxellana
ENSCGRG00001021763	Cirbp	98	97.744	ENSSBOG00000021919	DAZAP1	98	97.744	Saimiri_boliviensis_boliviensis
ENSCGRG00001021763	Cirbp	100	95.086	ENSSHAG00000013511	DAZAP1	100	95.086	Sarcophilus_harrisii
ENSCGRG00001021763	Cirbp	99	74.817	ENSSFOG00015020338	dazap1	99	67.971	Scleropages_formosus
ENSCGRG00001021763	Cirbp	99	71.290	ENSSMAG00000021047	dazap1	99	65.770	Scophthalmus_maximus
ENSCGRG00001021763	Cirbp	99	71.776	ENSSDUG00000008609	dazap1	99	65.770	Seriola_dumerili
ENSCGRG00001021763	Cirbp	99	71.776	ENSSLDG00000025339	dazap1	99	65.770	Seriola_lalandi_dorsalis
ENSCGRG00001021763	Cirbp	83	96.491	ENSSARG00000000513	DAZAP1	85	96.491	Sorex_araneus
ENSCGRG00001021763	Cirbp	100	91.198	ENSSPUG00000006680	DAZAP1	100	87.042	Sphenodon_punctatus
ENSCGRG00001021763	Cirbp	99	71.638	ENSSPAG00000002402	dazap1	99	66.015	Stegastes_partitus
ENSCGRG00001021763	Cirbp	100	97.297	ENSSSCG00000022528	DAZAP1	100	97.297	Sus_scrofa
ENSCGRG00001021763	Cirbp	50	96.581	ENSTGUG00000014159	-	100	96.581	Taeniopygia_guttata
ENSCGRG00001021763	Cirbp	98	87.719	ENSTGUG00000000869	-	100	88.471	Taeniopygia_guttata
ENSCGRG00001021763	Cirbp	99	71.290	ENSTRUG00000002467	dazap1	99	65.037	Takifugu_rubripes
ENSCGRG00001021763	Cirbp	99	72.816	ENSTNIG00000010201	dazap1	99	66.341	Tetraodon_nigroviridis
ENSCGRG00001021763	Cirbp	98	90.932	ENSTTRG00000014336	DAZAP1	100	90.932	Tursiops_truncatus
ENSCGRG00001021763	Cirbp	99	96.049	ENSUAMG00000014678	DAZAP1	94	96.049	Ursus_americanus
ENSCGRG00001021763	Cirbp	99	84.422	ENSUMAG00000005845	DAZAP1	93	81.436	Ursus_maritimus
ENSCGRG00001021763	Cirbp	98	97.733	ENSVVUG00000022865	DAZAP1	94	97.733	Vulpes_vulpes
ENSCGRG00001021763	Cirbp	100	82.152	ENSXETG00000003704	dazap1	100	79.462	Xenopus_tropicalis
ENSCGRG00001021763	Cirbp	99	71.290	ENSXMAG00000002593	dazap1	99	66.015	Xiphophorus_maculatus