EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00001021916 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Plus strand
Length: 111895 bases
Position: chrscaffold_55:2156295-2268189
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001023798	ResIII	PF04851.15	6e-05	1	1
ENSCGRP00001023798	DEAD	PF00270.29	1.8e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001028044	-	1113	-	ENSCGRP00001023798	370 (aa)	-	-

Gene Model

Click here to download ENSCGRG00001021916's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001021916's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00001021916	-	86	33.333	ENSCGRG00001022442	Eif4a2	94	31.757
ENSCGRG00001021916	-	79	34.494	ENSCGRG00001014927	Ddx47	69	34.494
ENSCGRG00001021916	-	86	32.659	ENSCGRG00001009326	Eif4a1	85	33.526
ENSCGRG00001021916	-	92	33.159	ENSCGRG00001023465	Ddx6	78	33.159
ENSCGRG00001021916	-	86	30.149	ENSCGRG00001018048	-	83	30.149
ENSCGRG00001021916	-	89	78.771	ENSCGRG00001001611	Ddx39	84	78.771
ENSCGRG00001021916	-	86	33.526	ENSCGRG00001022918	-	83	33.526

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001021916	-	89	84.358	ENSG00000198563	DDX39B	95	91.525	Homo_sapiens
ENSCGRG00001021916	-	89	84.358	ENSAMEG00000009508	DDX39B	83	84.358	Ailuropoda_melanoleuca
ENSCGRG00001021916	-	87	81.250	ENSACIG00000004534	ddx39b	81	81.250	Amphilophus_citrinellus
ENSCGRG00001021916	-	88	80.899	ENSATEG00000012366	ddx39b	82	80.899	Anabas_testudineus
ENSCGRG00001021916	-	89	83.565	ENSACAG00000012240	DDX39B	83	83.565	Anolis_carolinensis
ENSCGRG00001021916	-	89	84.358	ENSANAG00000030372	DDX39B	87	84.314	Aotus_nancymaae
ENSCGRG00001021916	-	87	80.398	ENSACLG00000018759	ddx39b	80	80.398	Astatotilapia_calliptera
ENSCGRG00001021916	-	89	81.285	ENSAMXG00000017837	ddx39b	82	81.285	Astyanax_mexicanus
ENSCGRG00001021916	-	89	84.078	ENSBTAG00000014490	DDX39B	83	84.078	Bos_taurus
ENSCGRG00001021916	-	89	84.358	ENSCJAG00000003152	DDX39B	83	84.358	Callithrix_jacchus
ENSCGRG00001021916	-	89	84.358	ENSCAFG00000000509	DDX39B	99	83.172	Canis_familiaris
ENSCGRG00001021916	-	89	84.358	ENSCAFG00020020530	DDX39B	83	84.358	Canis_lupus_dingo
ENSCGRG00001021916	-	89	84.078	ENSCHIG00000004579	DDX39B	83	84.078	Capra_hircus
ENSCGRG00001021916	-	89	77.353	ENSTSYG00000029741	-	89	77.353	Carlito_syrichta
ENSCGRG00001021916	-	89	84.358	ENSTSYG00000010226	-	87	84.123	Carlito_syrichta
ENSCGRG00001021916	-	89	84.358	ENSCAPG00000010066	DDX39B	83	84.358	Cavia_aperea
ENSCGRG00001021916	-	89	84.358	ENSCPOG00000002335	DDX39B	83	84.358	Cavia_porcellus
ENSCGRG00001021916	-	89	84.358	ENSCCAG00000027897	DDX39B	85	84.314	Cebus_capucinus
ENSCGRG00001021916	-	88	75.211	ENSCATG00000043709	DDX39B	83	75.211	Cercocebus_atys
ENSCGRG00001021916	-	89	84.358	ENSCLAG00000014555	DDX39B	83	84.358	Chinchilla_lanigera
ENSCGRG00001021916	-	87	84.375	ENSCSAG00000008517	DDX39B	83	84.375	Chlorocebus_sabaeus
ENSCGRG00001021916	-	65	81.250	ENSCPBG00000014671	-	99	81.250	Chrysemys_picta_bellii
ENSCGRG00001021916	-	89	84.358	ENSCANG00000041217	DDX39B	86	84.314	Colobus_angolensis_palliatus
ENSCGRG00001021916	-	89	81.285	ENSDARG00000036069	ddx39b	82	81.285	Danio_rerio
ENSCGRG00001021916	-	89	84.358	ENSDNOG00000010215	DDX39B	83	84.358	Dasypus_novemcinctus
ENSCGRG00001021916	-	77	84.918	ENSDORG00000004985	Ddx39b	89	78.932	Dipodomys_ordii
ENSCGRG00001021916	-	60	97.647	ENSETEG00000009649	DDX39B	51	97.647	Echinops_telfairi
ENSCGRG00001021916	-	89	84.358	ENSEASG00005017156	DDX39B	83	84.358	Equus_asinus_asinus
ENSCGRG00001021916	-	89	84.358	ENSECAG00000007750	DDX39B	83	84.358	Equus_caballus
ENSCGRG00001021916	-	89	80.726	ENSELUG00000017904	ddx39b	83	80.726	Esox_lucius
ENSCGRG00001021916	-	89	84.358	ENSFCAG00000004497	DDX39B	83	84.358	Felis_catus
ENSCGRG00001021916	-	89	84.358	ENSFDAG00000011074	DDX39B	83	84.358	Fukomys_damarensis
ENSCGRG00001021916	-	77	82.803	ENSGAGG00000001300	-	79	82.803	Gopherus_agassizii
ENSCGRG00001021916	-	89	84.358	ENSGGOG00000005989	DDX39B	86	84.314	Gorilla_gorilla
ENSCGRG00001021916	-	89	84.358	ENSHGLG00000019248	DDX39B	83	84.358	Heterocephalus_glaber_female
ENSCGRG00001021916	-	89	84.358	ENSHGLG00100011850	DDX39B	83	84.358	Heterocephalus_glaber_male
ENSCGRG00001021916	-	89	80.726	ENSIPUG00000015733	DDX39B	77	80.726	Ictalurus_punctatus
ENSCGRG00001021916	-	89	84.078	ENSSTOG00000012838	DDX39B	83	84.078	Ictidomys_tridecemlineatus
ENSCGRG00001021916	-	89	84.358	ENSJJAG00000005660	-	83	84.358	Jaculus_jaculus
ENSCGRG00001021916	-	88	69.972	ENSLBEG00000012254	ddx39b	82	69.801	Labrus_bergylta
ENSCGRG00001021916	-	60	65.844	ENSLBEG00000017177	-	69	65.844	Labrus_bergylta
ENSCGRG00001021916	-	88	74.930	ENSLACG00000002110	DDX39B	83	74.930	Latimeria_chalumnae
ENSCGRG00001021916	-	89	84.034	ENSLAFG00000014202	DDX39B	83	84.034	Loxodonta_africana
ENSCGRG00001021916	-	89	84.358	ENSMFAG00000034233	DDX39B	86	84.314	Macaca_fascicularis
ENSCGRG00001021916	-	89	84.358	ENSMMUG00000008839	DDX39B	86	84.314	Macaca_mulatta
ENSCGRG00001021916	-	89	84.358	ENSMNEG00000041059	DDX39B	86	84.314	Macaca_nemestrina
ENSCGRG00001021916	-	89	84.358	ENSMLEG00000043791	DDX39B	86	84.314	Mandrillus_leucophaeus
ENSCGRG00001021916	-	87	80.398	ENSMZEG00005017654	ddx39b	80	80.398	Maylandia_zebra
ENSCGRG00001021916	-	89	84.358	ENSMAUG00000008059	Ddx39b	83	84.358	Mesocricetus_auratus
ENSCGRG00001021916	-	89	84.358	ENSMICG00000017349	DDX39B	83	84.358	Microcebus_murinus
ENSCGRG00001021916	-	89	84.637	ENSMOCG00000011169	Ddx39b	83	84.637	Microtus_ochrogaster
ENSCGRG00001021916	-	77	84.691	ENSMODG00000015791	DDX39B	72	84.691	Monodelphis_domestica
ENSCGRG00001021916	-	89	84.358	ENSMUSG00000019432	Ddx39b	83	96.774	Mus_musculus
ENSCGRG00001021916	-	89	84.358	MGP_PahariEiJ_G0020513	Ddx39b	83	96.774	Mus_pahari
ENSCGRG00001021916	-	89	84.358	MGP_SPRETEiJ_G0022424	Ddx39b	83	84.358	Mus_spretus
ENSCGRG00001021916	-	89	84.358	ENSMPUG00000011407	DDX39B	83	84.358	Mustela_putorius_furo
ENSCGRG00001021916	-	76	83.226	ENSMLUG00000001681	DDX39B	99	83.226	Myotis_lucifugus
ENSCGRG00001021916	-	89	84.358	ENSNGAG00000022948	Ddx39b	83	84.358	Nannospalax_galili
ENSCGRG00001021916	-	69	81.690	ENSNLEG00000006094	DDX39B	80	81.690	Nomascus_leucogenys
ENSCGRG00001021916	-	67	93.333	ENSMEUG00000008264	DDX39B	60	93.333	Notamacropus_eugenii
ENSCGRG00001021916	-	89	84.358	ENSOPRG00000011923	DDX39B	83	84.358	Ochotona_princeps
ENSCGRG00001021916	-	89	84.358	ENSODEG00000018083	DDX39B	83	84.358	Octodon_degus
ENSCGRG00001021916	-	88	80.056	ENSONIG00000004740	ddx39b	82	80.056	Oreochromis_niloticus
ENSCGRG00001021916	-	89	80.914	ENSOCUG00000024126	DDX39B	84	80.914	Oryctolagus_cuniculus
ENSCGRG00001021916	-	89	83.287	ENSOGAG00000028850	-	83	83.287	Otolemur_garnettii
ENSCGRG00001021916	-	89	82.123	ENSOGAG00000009067	-	99	83.489	Otolemur_garnettii
ENSCGRG00001021916	-	89	84.078	ENSOARG00000008787	DDX39B	82	84.078	Ovis_aries
ENSCGRG00001021916	-	89	84.358	ENSPPAG00000043072	DDX39B	86	84.314	Pan_paniscus
ENSCGRG00001021916	-	89	84.358	ENSPPRG00000001913	DDX39B	85	84.358	Panthera_pardus
ENSCGRG00001021916	-	89	83.799	ENSPTIG00000017669	DDX39B	83	83.799	Panthera_tigris_altaica
ENSCGRG00001021916	-	89	84.358	ENSPTRG00000032509	DDX39B	86	84.314	Pan_troglodytes
ENSCGRG00001021916	-	89	84.358	ENSPANG00000018609	DDX39B	86	84.314	Papio_anubis
ENSCGRG00001021916	-	89	80.447	ENSPKIG00000011324	ddx39b	82	80.447	Paramormyrops_kingsleyae
ENSCGRG00001021916	-	89	84.637	ENSPEMG00000016905	Ddx39b	83	84.637	Peromyscus_maniculatus_bairdii
ENSCGRG00001021916	-	89	84.358	ENSPCIG00000017572	DDX39B	83	84.358	Phascolarctos_cinereus
ENSCGRG00001021916	-	89	84.358	ENSPPYG00000016433	DDX39B	83	84.358	Pongo_abelii
ENSCGRG00001021916	-	68	81.625	ENSPCAG00000003484	DDX39B	99	81.625	Procavia_capensis
ENSCGRG00001021916	-	89	84.358	ENSPCOG00000018656	DDX39B	83	84.358	Propithecus_coquereli
ENSCGRG00001021916	-	89	84.358	ENSPVAG00000004653	DDX39B	83	84.358	Pteropus_vampyrus
ENSCGRG00001021916	-	87	72.239	ENSPNYG00000010382	ddx39b	80	72.321	Pundamilia_nyererei
ENSCGRG00001021916	-	89	81.285	ENSPNAG00000026926	ddx39b	82	81.285	Pygocentrus_nattereri
ENSCGRG00001021916	-	89	84.358	ENSRNOG00000000841	Ddx39b	83	84.358	Rattus_norvegicus
ENSCGRG00001021916	-	89	78.994	ENSRBIG00000031309	DDX39B	82	78.994	Rhinopithecus_bieti
ENSCGRG00001021916	-	89	84.358	ENSRROG00000039517	DDX39B	86	84.314	Rhinopithecus_roxellana
ENSCGRG00001021916	-	89	78.994	ENSSBOG00000035513	-	82	78.994	Saimiri_boliviensis_boliviensis
ENSCGRG00001021916	-	89	84.358	ENSSHAG00000003209	DDX39B	83	84.358	Sarcophilus_harrisii
ENSCGRG00001021916	-	89	80.447	ENSSFOG00015016107	ddx39b	82	80.447	Scleropages_formosus
ENSCGRG00001021916	-	88	81.461	ENSSDUG00000011557	ddx39b	82	81.461	Seriola_dumerili
ENSCGRG00001021916	-	88	81.180	ENSSLDG00000015763	ddx39b	82	81.180	Seriola_lalandi_dorsalis
ENSCGRG00001021916	-	60	97.647	ENSSARG00000005245	DDX39B	59	97.647	Sorex_araneus
ENSCGRG00001021916	-	89	83.799	ENSSPUG00000012805	DDX39B	83	83.799	Sphenodon_punctatus
ENSCGRG00001021916	-	89	84.358	ENSSSCG00000001400	DDX39B	99	84.104	Sus_scrofa
ENSCGRG00001021916	-	89	67.318	ENSTBEG00000003721	DDX39B	83	67.318	Tupaia_belangeri
ENSCGRG00001021916	-	89	74.380	ENSTTRG00000014074	DDX39B	84	74.380	Tursiops_truncatus
ENSCGRG00001021916	-	89	72.911	ENSUAMG00000027335	DDX39B	83	73.199	Ursus_americanus
ENSCGRG00001021916	-	95	75.773	ENSUMAG00000015124	DDX39B	96	76.289	Ursus_maritimus
ENSCGRG00001021916	-	89	84.358	ENSVVUG00000019518	DDX39B	82	84.358	Vulpes_vulpes
ENSCGRG00001021916	-	89	68.611	ENSXETG00000002498	ddx39b	83	68.611	Xenopus_tropicalis