EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCGRG00001021938 (Gene tree)
Gene ID
-
Gene Symbol
Pabpc1l
Alias
1810053B01Rik|ePAB
Full Name
poly(A) binding protein%2C cytoplasmic 1-like
Gene Type
protein_coding
Species
Cricetulus_griseus_chok1gshd
Status
putative
Strand
Plus strand
Length
26693 bases
Position
chrscaffold_31:8237229-8263921
Accession
1922908
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCGRP00001023824PABPPF00658.181.5e-2411
ENSCGRP00001023824RRM_5PF13893.67.6e-1512
ENSCGRP00001023824RRM_5PF13893.67.6e-1522
ENSCGRP00001023824RRM_1PF00076.228.4e-9214
ENSCGRP00001023824RRM_1PF00076.228.4e-9224
ENSCGRP00001023824RRM_1PF00076.228.4e-9234
ENSCGRP00001023824RRM_1PF00076.228.4e-9244
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCGRT00001028070-1830-ENSCGRP00001023824609 (aa)-UPI000454A601
Gene Model
Click here to download ENSCGRG00001021938's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001021938's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCGRG00001021938Pabpc1l5241.772ENSCGRG00001018909Rbm36141.772
ENSCGRG00001021938Pabpc1l6237.624ENSCGRG00001000323Rbm195137.097
ENSCGRG00001021938Pabpc1l5334.524ENSCGRG00001015058Celf25634.524
ENSCGRG00001021938Pabpc1l9957.788ENSCGRG00001007983Pabpc69857.788
ENSCGRG00001021938Pabpc1l6035.057ENSCGRG00001003590Sf3b47535.028
ENSCGRG00001021938Pabpc1l6268.362ENSCGRG00001023387-9663.776
ENSCGRG00001021938Pabpc1l5630.864ENSCGRG00001005548Hnrnpa05031.613
ENSCGRG00001021938Pabpc1l9960.680ENSCGRG00001018166Pabpc49760.841
ENSCGRG00001021938Pabpc1l7159.167ENSCGRG00001002070Pabpc4l9759.167
ENSCGRG00001021938Pabpc1l6334.940ENSCGRG00001024409Elavl28934.940
ENSCGRG00001021938Pabpc1l5834.118ENSCGRG00001019777Celf37833.333
ENSCGRG00001021938Pabpc1l6333.735ENSCGRG00001020348Elavl48933.735
ENSCGRG00001021938Pabpc1l9962.184ENSCGRG00001022067-9961.950
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCGRG00001021938Pabpc1l9976.623ENSG00000101104PABPC1L9984.568Homo_sapiens
ENSCGRG00001021938Pabpc1l9860.287ENSAPOG00000010842pabpc1l9860.447Acanthochromis_polyacanthus
ENSCGRG00001021938Pabpc1l9867.901ENSAMEG00000004099PABPC1L9969.111Ailuropoda_melanoleuca
ENSCGRG00001021938Pabpc1l9965.893ENSACIG00000021004-9965.893Amphilophus_citrinellus
ENSCGRG00001021938Pabpc1l9859.841ENSAOCG00000006167-9959.779Amphiprion_ocellaris
ENSCGRG00001021938Pabpc1l9964.018ENSAPEG00000010558-9775.248Amphiprion_percula
ENSCGRG00001021938Pabpc1l9962.201ENSATEG00000007428pabpc1l9962.201Anabas_testudineus
ENSCGRG00001021938Pabpc1l9866.453ENSAPLG00000008415PABPC1L9966.193Anas_platyrhynchos
ENSCGRG00001021938Pabpc1l9966.401ENSACAG00000011841PABPC1L9866.401Anolis_carolinensis
ENSCGRG00001021938Pabpc1l9976.136ENSANAG00000026826PABPC1L9976.136Aotus_nancymaae
ENSCGRG00001021938Pabpc1l9959.591ENSACLG00000024791pabpc1l9959.591Astatotilapia_calliptera
ENSCGRG00001021938Pabpc1l9962.893ENSAMXG00000013552pabpc1l9962.893Astyanax_mexicanus
ENSCGRG00001021938Pabpc1l5987.500ENSBTAG00000055300-10087.500Bos_taurus
ENSCGRG00001021938Pabpc1l6172.177ENSBTAG00000016849PABPC1L7572.177Bos_taurus
ENSCGRG00001021938Pabpc1l6070.115ENSCJAG00000038506-10070.115Callithrix_jacchus
ENSCGRG00001021938Pabpc1l9976.299ENSCJAG00000017628PABPC1L9976.299Callithrix_jacchus
ENSCGRG00001021938Pabpc1l9867.287ENSCAFG00000009573PABPC1L9967.287Canis_familiaris
ENSCGRG00001021938Pabpc1l9976.499ENSCAFG00020013828PABPC1L9976.499Canis_lupus_dingo
ENSCGRG00001021938Pabpc1l10073.008ENSCHIG00000025759PABPC1L9373.008Capra_hircus
ENSCGRG00001021938Pabpc1l9975.772ENSTSYG00000006645PABPC1L9975.772Carlito_syrichta
ENSCGRG00001021938Pabpc1l9975.791ENSCAPG00000014519PABPC1L9975.791Cavia_aperea
ENSCGRG00001021938Pabpc1l9976.661ENSCPOG00000013633PABPC1L9976.661Cavia_porcellus
ENSCGRG00001021938Pabpc1l9976.299ENSCCAG00000023338PABPC1L9976.299Cebus_capucinus
ENSCGRG00001021938Pabpc1l9977.110ENSCATG00000034065PABPC1L9977.110Cercocebus_atys
ENSCGRG00001021938Pabpc1l9976.499ENSCLAG00000005298PABPC1L9977.310Chinchilla_lanigera
ENSCGRG00001021938Pabpc1l9977.273ENSCSAG00000014242PABPC1L9977.273Chlorocebus_sabaeus
ENSCGRG00001021938Pabpc1l7274.434ENSCPBG00000017755-9974.434Chrysemys_picta_bellii
ENSCGRG00001021938Pabpc1l6274.242ENSCPBG00000007810-8174.242Chrysemys_picta_bellii
ENSCGRG00001021938Pabpc1l9747.444ENSCING00000002796-9747.561Ciona_intestinalis
ENSCGRG00001021938Pabpc1l9954.591ENSCSAVG00000003102-10077.397Ciona_savignyi
ENSCGRG00001021938Pabpc1l9856.441ENSCSAVG00000004246-9657.167Ciona_savignyi
ENSCGRG00001021938Pabpc1l9973.280ENSCANG00000037530PABPC1L9973.280Colobus_angolensis_palliatus
ENSCGRG00001021938Pabpc1l100100.000ENSCGRG00000007946Pabpc1l100100.000Cricetulus_griseus_crigri
ENSCGRG00001021938Pabpc1l9959.902ENSCSEG00000021295pabpc1l9959.902Cynoglossus_semilaevis
ENSCGRG00001021938Pabpc1l9961.935ENSCVAG00000015943-9978.030Cyprinodon_variegatus
ENSCGRG00001021938Pabpc1l9963.434ENSDARG00000002597pabpc1l8880.769Danio_rerio
ENSCGRG00001021938Pabpc1l9976.461ENSDNOG00000048450PABPC1L9976.461Dasypus_novemcinctus
ENSCGRG00001021938Pabpc1l10079.160ENSDORG00000001067Pabpc1l10079.160Dipodomys_ordii
ENSCGRG00001021938Pabpc1l9683.740ENSETEG00000009969PABPC1L7283.740Echinops_telfairi
ENSCGRG00001021938Pabpc1l5077.778ENSEASG00005023407-6577.778Equus_asinus_asinus
ENSCGRG00001021938Pabpc1l5985.714ENSEASG00005023408-10085.714Equus_asinus_asinus
ENSCGRG00001021938Pabpc1l6969.721ENSECAG00000040139-8969.721Equus_caballus
ENSCGRG00001021938Pabpc1l9973.420ENSEEUG00000005978PABPC1L9973.420Erinaceus_europaeus
ENSCGRG00001021938Pabpc1l9962.618ENSELUG00000001811pabpc1l9962.618Esox_lucius
ENSCGRG00001021938Pabpc1l9976.175ENSFCAG00000011692PABPC1L9976.175Felis_catus
ENSCGRG00001021938Pabpc1l8170.217ENSFALG00000005372PABPC1L8570.217Ficedula_albicollis
ENSCGRG00001021938Pabpc1l9974.230ENSFDAG00000008291PABPC1L9974.230Fukomys_damarensis
ENSCGRG00001021938Pabpc1l9961.844ENSFHEG00000003398pabpc1l9961.844Fundulus_heteroclitus
ENSCGRG00001021938Pabpc1l9961.685ENSGMOG00000004437pabpc1l9961.685Gadus_morhua
ENSCGRG00001021938Pabpc1l9964.274ENSGALG00000004123PABPC1L9976.259Gallus_gallus
ENSCGRG00001021938Pabpc1l9958.396ENSGAFG00000021057pabpc1l9958.626Gambusia_affinis
ENSCGRG00001021938Pabpc1l9860.890ENSGACG00000002792pabpc1l9960.890Gasterosteus_aculeatus
ENSCGRG00001021938Pabpc1l9967.402ENSGAGG00000000589PABPC1L9867.402Gopherus_agassizii
ENSCGRG00001021938Pabpc1l9976.786ENSGGOG00000004584PABPC1L9976.786Gorilla_gorilla
ENSCGRG00001021938Pabpc1l9959.738ENSHBUG00000006134pabpc1l9959.738Haplochromis_burtoni
ENSCGRG00001021938Pabpc1l9977.273ENSHGLG00000008434PABPC1L9977.273Heterocephalus_glaber_female
ENSCGRG00001021938Pabpc1l6174.719ENSHGLG00100019506-10074.719Heterocephalus_glaber_male
ENSCGRG00001021938Pabpc1l9977.273ENSHGLG00100012151PABPC1L9977.273Heterocephalus_glaber_male
ENSCGRG00001021938Pabpc1l9861.157ENSHCOG00000009270pabpc1l9961.157Hippocampus_comes
ENSCGRG00001021938Pabpc1l9962.908ENSIPUG00000012602pabpc1l9962.908Ictalurus_punctatus
ENSCGRG00001021938Pabpc1l6354.271ENSIPUG00000006780-9654.271Ictalurus_punctatus
ENSCGRG00001021938Pabpc1l6058.046ENSIPUG00000006760-8858.046Ictalurus_punctatus
ENSCGRG00001021938Pabpc1l9978.247ENSSTOG00000003739PABPC1L9978.247Ictidomys_tridecemlineatus
ENSCGRG00001021938Pabpc1l9976.374ENSJJAG00000022406Pabpc1l9973.650Jaculus_jaculus
ENSCGRG00001021938Pabpc1l9961.613ENSKMAG00000016847pabpc1l9961.613Kryptolebias_marmoratus
ENSCGRG00001021938Pabpc1l9860.940ENSLBEG00000010084pabpc1l9960.940Labrus_bergylta
ENSCGRG00001021938Pabpc1l9961.137ENSLACG00000005762PABPC1L9962.842Latimeria_chalumnae
ENSCGRG00001021938Pabpc1l9962.698ENSLOCG00000007519pabpc1l9962.698Lepisosteus_oculatus
ENSCGRG00001021938Pabpc1l9974.400ENSLAFG00000003553PABPC1L10074.400Loxodonta_africana
ENSCGRG00001021938Pabpc1l9976.948ENSMFAG00000040365PABPC1L9976.948Macaca_fascicularis
ENSCGRG00001021938Pabpc1l9974.960ENSMNEG00000032298PABPC1L9974.960Macaca_nemestrina
ENSCGRG00001021938Pabpc1l9977.110ENSMLEG00000043139PABPC1L9977.110Mandrillus_leucophaeus
ENSCGRG00001021938Pabpc1l9761.264ENSMAMG00000011854pabpc1l9360.877Mastacembelus_armatus
ENSCGRG00001021938Pabpc1l9959.591ENSMZEG00005023713pabpc1l9959.591Maylandia_zebra
ENSCGRG00001021938Pabpc1l9966.614ENSMGAG00000003674PABPC1L9966.614Meleagris_gallopavo
ENSCGRG00001021938Pabpc1l10092.447ENSMOCG00000013186Pabpc1l10092.447Microtus_ochrogaster
ENSCGRG00001021938Pabpc1l9960.692ENSMMOG00000020574-9077.692Mola_mola
ENSCGRG00001021938Pabpc1l9770.530ENSMODG00000016198PABPC1L9670.052Monodelphis_domestica
ENSCGRG00001021938Pabpc1l9760.097ENSMALG00000021622pabpc1l10060.097Monopterus_albus
ENSCGRG00001021938Pabpc1l9991.598MGP_CAROLIEiJ_G0024627Pabpc1l10091.598Mus_caroli
ENSCGRG00001021938Pabpc1l9991.598ENSMUSG00000054582Pabpc1l10091.598Mus_musculus
ENSCGRG00001021938Pabpc1l9992.066MGP_PahariEiJ_G0026071Pabpc1l9992.066Mus_pahari
ENSCGRG00001021938Pabpc1l9991.598MGP_SPRETEiJ_G0025549Pabpc1l10091.598Mus_spretus
ENSCGRG00001021938Pabpc1l9974.074ENSMPUG00000017646PABPC1L9974.074Mustela_putorius_furo
ENSCGRG00001021938Pabpc1l9871.935ENSMLUG00000006324PABPC1L9771.935Myotis_lucifugus
ENSCGRG00001021938Pabpc1l10088.506ENSNGAG00000010458Pabpc1l10088.506Nannospalax_galili
ENSCGRG00001021938Pabpc1l9967.146ENSNBRG00000016633pabpc1l9967.146Neolamprologus_brichardi
ENSCGRG00001021938Pabpc1l8966.848ENSMEUG00000007905-8966.848Notamacropus_eugenii
ENSCGRG00001021938Pabpc1l9975.689ENSOPRG00000011846PABPC1L9975.689Ochotona_princeps
ENSCGRG00001021938Pabpc1l9968.618ENSODEG00000015482PABPC1L9968.618Octodon_degus
ENSCGRG00001021938Pabpc1l5868.125ENSODEG00000002920-9968.125Octodon_degus
ENSCGRG00001021938Pabpc1l9959.748ENSONIG00000017314pabpc1l9959.748Oreochromis_niloticus
ENSCGRG00001021938Pabpc1l8960.784ENSOANG00000015793-10060.784Ornithorhynchus_anatinus
ENSCGRG00001021938Pabpc1l9970.948ENSOCUG00000003005PABPC1L9970.948Oryctolagus_cuniculus
ENSCGRG00001021938Pabpc1l9866.355ENSORLG00000010322pabpc1l9866.355Oryzias_latipes
ENSCGRG00001021938Pabpc1l9866.355ENSORLG00020021193pabpc1l9866.355Oryzias_latipes_hni
ENSCGRG00001021938Pabpc1l9866.355ENSORLG00015017018pabpc1l9866.355Oryzias_latipes_hsok
ENSCGRG00001021938Pabpc1l9957.014ENSOMEG00000010789pabpc1l9957.014Oryzias_melastigma
ENSCGRG00001021938Pabpc1l9975.040ENSOGAG00000032999PABPC1L10075.040Otolemur_garnettii
ENSCGRG00001021938Pabpc1l9974.513ENSOARG00000004578PABPC1L9974.513Ovis_aries
ENSCGRG00001021938Pabpc1l9976.461ENSPPAG00000039677PABPC1L9976.461Pan_paniscus
ENSCGRG00001021938Pabpc1l6373.457ENSPPRG00000019327-9873.457Panthera_pardus
ENSCGRG00001021938Pabpc1l9977.063ENSPTIG00000006524PABPC1L9977.063Panthera_tigris_altaica
ENSCGRG00001021938Pabpc1l6684.259ENSPTRG00000013531PABPC1L9984.259Pan_troglodytes
ENSCGRG00001021938Pabpc1l9977.110ENSPANG00000018788PABPC1L9977.110Papio_anubis
ENSCGRG00001021938Pabpc1l5476.336ENSPKIG00000016810-9376.336Paramormyrops_kingsleyae
ENSCGRG00001021938Pabpc1l9963.622ENSPKIG00000007322pabpc1l9963.622Paramormyrops_kingsleyae
ENSCGRG00001021938Pabpc1l6776.271ENSPSIG00000013289PABPC1L9876.271Pelodiscus_sinensis
ENSCGRG00001021938Pabpc1l7064.249ENSPMGG00000023121-9064.249Periophthalmus_magnuspinnatus
ENSCGRG00001021938Pabpc1l6272.558ENSPMGG00000023117pabpc1l9772.558Periophthalmus_magnuspinnatus
ENSCGRG00001021938Pabpc1l9993.421ENSPEMG00000020671Pabpc1l9993.421Peromyscus_maniculatus_bairdii
ENSCGRG00001021938Pabpc1l9962.561ENSPFOG00000013241pabpc1l9961.798Poecilia_formosa
ENSCGRG00001021938Pabpc1l9961.798ENSPLAG00000017490-9961.798Poecilia_latipinna
ENSCGRG00001021938Pabpc1l5379.231ENSPLAG00000023686-9279.231Poecilia_latipinna
ENSCGRG00001021938Pabpc1l5379.231ENSPMEG00000009185-8879.231Poecilia_mexicana
ENSCGRG00001021938Pabpc1l9961.997ENSPMEG00000007677pabpc1l9961.502Poecilia_mexicana
ENSCGRG00001021938Pabpc1l6672.236ENSPREG00000015886pabpc1l9972.236Poecilia_reticulata
ENSCGRG00001021938Pabpc1l9976.948ENSPPYG00000011042PABPC1L9976.948Pongo_abelii
ENSCGRG00001021938Pabpc1l6378.125ENSPCAG00000011787-7578.125Procavia_capensis
ENSCGRG00001021938Pabpc1l9974.510ENSPCOG00000020630PABPC1L9974.510Propithecus_coquereli
ENSCGRG00001021938Pabpc1l9975.041ENSPVAG00000012663PABPC1L9975.041Pteropus_vampyrus
ENSCGRG00001021938Pabpc1l9967.146ENSPNYG00000004101pabpc1l9967.146Pundamilia_nyererei
ENSCGRG00001021938Pabpc1l9955.911ENSPNAG00000021248pabpc1l9955.911Pygocentrus_nattereri
ENSCGRG00001021938Pabpc1l9992.053ENSRNOG00000012750Pabpc1l9992.053Rattus_norvegicus
ENSCGRG00001021938Pabpc1l9976.786ENSRBIG00000035381PABPC1L9976.786Rhinopithecus_bieti
ENSCGRG00001021938Pabpc1l9976.948ENSRROG00000044498PABPC1L9976.948Rhinopithecus_roxellana
ENSCGRG00001021938Pabpc1l9976.786ENSSBOG00000009532-9976.786Saimiri_boliviensis_boliviensis
ENSCGRG00001021938Pabpc1l9865.923ENSSHAG00000011446PABPC1L10065.923Sarcophilus_harrisii
ENSCGRG00001021938Pabpc1l9963.782ENSSFOG00015017304pabpc1l9963.782Scleropages_formosus
ENSCGRG00001021938Pabpc1l9961.563ENSSMAG00000010516pabpc1l9878.295Scophthalmus_maximus
ENSCGRG00001021938Pabpc1l9960.987ENSSDUG00000014743pabpc1l9960.987Seriola_dumerili
ENSCGRG00001021938Pabpc1l9963.696ENSSLDG00000006981pabpc1l9671.233Seriola_lalandi_dorsalis
ENSCGRG00001021938Pabpc1l9966.667ENSSPUG00000004233PABPC1L9866.667Sphenodon_punctatus
ENSCGRG00001021938Pabpc1l9860.000ENSSPAG00000017137pabpc1l9960.000Stegastes_partitus
ENSCGRG00001021938Pabpc1l9974.020ENSSSCG00000007382PABPC1L9974.020Sus_scrofa
ENSCGRG00001021938Pabpc1l9965.987ENSTGUG00000005114PABPC1L9965.987Taeniopygia_guttata
ENSCGRG00001021938Pabpc1l9760.548ENSTRUG00000011085pabpc1l9460.201Takifugu_rubripes
ENSCGRG00001021938Pabpc1l9859.084ENSTNIG00000017903pabpc1l9859.084Tetraodon_nigroviridis
ENSCGRG00001021938Pabpc1l9784.932ENSTBEG00000002851PABPC1L8084.932Tupaia_belangeri
ENSCGRG00001021938Pabpc1l9474.010ENSTTRG00000007618PABPC1L9673.913Tursiops_truncatus
ENSCGRG00001021938Pabpc1l9972.712ENSUAMG00000017682PABPC1L9972.712Ursus_americanus
ENSCGRG00001021938Pabpc1l6782.535ENSUMAG00000025436PABPC1L9182.535Ursus_maritimus
ENSCGRG00001021938Pabpc1l9982.308ENSVVUG00000018939PABPC1L9982.308Vulpes_vulpes
ENSCGRG00001021938Pabpc1l9960.890ENSXETG00000022831pabpc1l9960.890Xenopus_tropicalis
ENSCGRG00001021938Pabpc1l9964.537ENSXCOG00000005459pabpc1l9975.177Xiphophorus_couchianus
ENSCGRG00001021938Pabpc1l9961.637ENSXMAG00000017135pabpc1l9961.637Xiphophorus_maculatus

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