EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00001022350 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Minus strand
Length: 2117 bases
Position: chrscaffold_1:16447090-16449206
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001024431	RRM_1	PF00076.22	1.3e-46	1	4
ENSCGRP00001024431	RRM_1	PF00076.22	1.3e-46	2	4
ENSCGRP00001024431	RRM_1	PF00076.22	1.3e-46	3	4
ENSCGRP00001024431	RRM_1	PF00076.22	1.3e-46	4	4
ENSCGRP00001024439	RRM_1	PF00076.22	1.4e-46	1	4
ENSCGRP00001024439	RRM_1	PF00076.22	1.4e-46	2	4
ENSCGRP00001024439	RRM_1	PF00076.22	1.4e-46	3	4
ENSCGRP00001024439	RRM_1	PF00076.22	1.4e-46	4	4
ENSCGRP00001024441	RRM_1	PF00076.22	2.6e-44	1	4
ENSCGRP00001024441	RRM_1	PF00076.22	2.6e-44	2	4
ENSCGRP00001024441	RRM_1	PF00076.22	2.6e-44	3	4
ENSCGRP00001024441	RRM_1	PF00076.22	2.6e-44	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001028677	-	1878	-	ENSCGRP00001024431	625 (aa)	-	-
ENSCGRT00001028687	-	1881	-	ENSCGRP00001024441	626 (aa)	-	-
ENSCGRT00001028685	-	1887	-	ENSCGRP00001024439	628 (aa)	-	-

Gene Model

Click here to download ENSCGRG00001022350's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001022350's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00001022350	-	95	81.651	ENSCGRG00001024315	-	92	81.459

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001022350	-	95	67.071	ENSG00000115053	NCL	94	73.835	Homo_sapiens
ENSCGRG00001022350	-	98	54.734	ENSANAG00000024378	-	90	56.431	Aotus_nancymaae
ENSCGRG00001022350	-	50	76.667	ENSBTAG00000051320	-	81	76.303	Bos_taurus
ENSCGRG00001022350	-	93	63.516	ENSBTAG00000016174	NCL	91	67.267	Bos_taurus
ENSCGRG00001022350	-	85	75.314	ENSBTAG00000026909	-	88	76.033	Bos_taurus
ENSCGRG00001022350	-	95	75.309	ENSBTAG00000050728	-	90	75.709	Bos_taurus
ENSCGRG00001022350	-	56	78.684	ENSCJAG00000013538	NCL	92	64.970	Callithrix_jacchus
ENSCGRG00001022350	-	95	68.882	ENSCAFG00000011037	NCL	92	68.769	Canis_familiaris
ENSCGRG00001022350	-	87	67.652	ENSCAFG00020023145	NCL	88	66.340	Canis_lupus_dingo
ENSCGRG00001022350	-	95	81.532	ENSCHIG00000021052	-	83	81.858	Capra_hircus
ENSCGRG00001022350	-	96	65.479	ENSCHIG00000012143	-	93	60.334	Capra_hircus
ENSCGRG00001022350	-	87	66.667	ENSCHIG00000010894	-	91	66.884	Capra_hircus
ENSCGRG00001022350	-	56	77.778	ENSTSYG00000029779	-	99	65.734	Carlito_syrichta
ENSCGRG00001022350	-	91	60.333	ENSTSYG00000036886	-	62	69.351	Carlito_syrichta
ENSCGRG00001022350	-	56	73.158	ENSCAPG00000009405	NCL	92	64.079	Cavia_aperea
ENSCGRG00001022350	-	56	78.158	ENSCPOG00000001034	NCL	92	65.762	Cavia_porcellus
ENSCGRG00001022350	-	67	75.377	ENSCCAG00000000551	-	84	75.377	Cebus_capucinus
ENSCGRG00001022350	-	95	67.267	ENSCATG00000037033	NCL	92	68.731	Cercocebus_atys
ENSCGRG00001022350	-	95	67.068	ENSCLAG00000013080	NCL	92	65.414	Chinchilla_lanigera
ENSCGRG00001022350	-	56	78.272	ENSCSAG00000006660	NCL	83	78.646	Chlorocebus_sabaeus
ENSCGRG00001022350	-	61	62.028	ENSCHOG00000012860	NCL	79	65.885	Choloepus_hoffmanni
ENSCGRG00001022350	-	100	94.531	ENSCGRG00000000507	-	100	94.531	Cricetulus_griseus_crigri
ENSCGRG00001022350	-	88	79.187	ENSCGRG00000017894	-	89	79.006	Cricetulus_griseus_crigri
ENSCGRG00001022350	-	95	63.183	ENSDNOG00000046347	-	93	61.774	Dasypus_novemcinctus
ENSCGRG00001022350	-	95	63.134	ENSDNOG00000010783	-	92	66.317	Dasypus_novemcinctus
ENSCGRG00001022350	-	56	76.517	ENSDORG00000012513	-	92	66.616	Dipodomys_ordii
ENSCGRG00001022350	-	61	66.827	ENSDORG00000023596	-	100	59.371	Dipodomys_ordii
ENSCGRG00001022350	-	92	46.992	ENSETEG00000008139	-	90	54.918	Echinops_telfairi
ENSCGRG00001022350	-	63	51.382	ENSETEG00000008553	-	90	53.176	Echinops_telfairi
ENSCGRG00001022350	-	56	74.933	ENSETEG00000014756	-	87	75.328	Echinops_telfairi
ENSCGRG00001022350	-	56	74.278	ENSETEG00000018937	-	86	60.484	Echinops_telfairi
ENSCGRG00001022350	-	93	67.337	ENSEASG00005008488	NCL	92	67.231	Equus_asinus_asinus
ENSCGRG00001022350	-	95	67.976	ENSECAG00000021868	NCL	92	67.868	Equus_caballus
ENSCGRG00001022350	-	88	64.415	ENSEEUG00000005913	NCL	85	65.182	Erinaceus_europaeus
ENSCGRG00001022350	-	95	68.477	ENSFCAG00000027622	NCL	92	68.366	Felis_catus
ENSCGRG00001022350	-	94	69.970	ENSFDAG00000014291	NCL	92	69.545	Fukomys_damarensis
ENSCGRG00001022350	-	95	66.920	ENSGGOG00000004300	NCL	92	66.817	Gorilla_gorilla
ENSCGRG00001022350	-	95	65.306	ENSHGLG00000011069	-	63	71.596	Heterocephalus_glaber_female
ENSCGRG00001022350	-	52	77.033	ENSHGLG00000005133	-	91	74.219	Heterocephalus_glaber_female
ENSCGRG00001022350	-	56	78.421	ENSHGLG00000002031	-	92	68.271	Heterocephalus_glaber_female
ENSCGRG00001022350	-	56	78.158	ENSHGLG00100014537	-	92	68.533	Heterocephalus_glaber_male
ENSCGRG00001022350	-	95	62.102	ENSHGLG00100000745	-	67	69.104	Heterocephalus_glaber_male
ENSCGRG00001022350	-	95	57.489	ENSLAFG00000013061	NCL	91	57.450	Loxodonta_africana
ENSCGRG00001022350	-	95	67.016	ENSMFAG00000040385	NCL	92	68.477	Macaca_fascicularis
ENSCGRG00001022350	-	95	67.016	ENSMMUG00000018094	NCL	85	79.098	Macaca_mulatta
ENSCGRG00001022350	-	57	83.182	ENSMNEG00000023839	NCL	84	79.098	Macaca_nemestrina
ENSCGRG00001022350	-	95	67.117	ENSMLEG00000028935	NCL	92	68.580	Mandrillus_leucophaeus
ENSCGRG00001022350	-	95	67.629	ENSMICG00000002538	-	92	67.372	Microcebus_murinus
ENSCGRG00001022350	-	95	57.638	ENSMICG00000029975	-	93	58.479	Microcebus_murinus
ENSCGRG00001022350	-	95	75.039	MGP_CAROLIEiJ_G0014362	Ncl	92	74.273	Mus_caroli
ENSCGRG00001022350	-	95	75.077	ENSMUSG00000026234	Ncl	92	73.853	Mus_musculus
ENSCGRG00001022350	-	95	74.422	MGP_PahariEiJ_G0027599	Ncl	92	74.273	Mus_pahari
ENSCGRG00001022350	-	95	74.154	MGP_SPRETEiJ_G0015164	Ncl	92	73.853	Mus_spretus
ENSCGRG00001022350	-	95	66.617	ENSMLUG00000014547	NCL	92	67.216	Myotis_lucifugus
ENSCGRG00001022350	-	95	74.242	ENSNGAG00000002454	-	92	72.851	Nannospalax_galili
ENSCGRG00001022350	-	56	70.924	ENSNGAG00000006188	-	63	68.213	Nannospalax_galili
ENSCGRG00001022350	-	86	55.617	ENSNLEG00000014107	-	86	55.686	Nomascus_leucogenys
ENSCGRG00001022350	-	94	52.269	ENSODEG00000007803	-	90	52.632	Octodon_degus
ENSCGRG00001022350	-	95	61.867	ENSODEG00000002748	-	100	62.974	Octodon_degus
ENSCGRG00001022350	-	56	74.339	ENSODEG00000003281	-	92	63.691	Octodon_degus
ENSCGRG00001022350	-	69	65.042	ENSODEG00000002441	-	92	70.741	Octodon_degus
ENSCGRG00001022350	-	95	63.307	ENSOCUG00000004312	NCL	91	64.557	Oryctolagus_cuniculus
ENSCGRG00001022350	-	94	62.712	ENSOARG00000020709	-	92	66.614	Ovis_aries
ENSCGRG00001022350	-	56	67.945	ENSOARG00000004072	-	62	67.914	Ovis_aries
ENSCGRG00001022350	-	78	62.411	ENSOARG00000013270	-	100	61.702	Ovis_aries
ENSCGRG00001022350	-	68	80.952	ENSOARG00000013710	-	95	65.482	Ovis_aries
ENSCGRG00001022350	-	95	67.223	ENSPPAG00000011619	NCL	92	67.270	Pan_paniscus
ENSCGRG00001022350	-	95	68.882	ENSPPRG00000012603	NCL	92	68.769	Panthera_pardus
ENSCGRG00001022350	-	94	68.445	ENSPTIG00000010393	NCL	91	67.424	Panthera_tigris_altaica
ENSCGRG00001022350	-	95	66.515	ENSPTRG00000013025	NCL	92	66.717	Pan_troglodytes
ENSCGRG00001022350	-	95	67.016	ENSPANG00000010292	NCL	92	68.477	Papio_anubis
ENSCGRG00001022350	-	95	61.286	ENSPPYG00000013265	NCL	92	61.516	Pongo_abelii
ENSCGRG00001022350	-	95	65.895	ENSPCOG00000004160	-	88	75.066	Propithecus_coquereli
ENSCGRG00001022350	-	95	67.879	ENSPCOG00000003051	-	92	67.771	Propithecus_coquereli
ENSCGRG00001022350	-	95	68.237	ENSPVAG00000000297	NCL	92	68.278	Pteropus_vampyrus
ENSCGRG00001022350	-	95	71.927	ENSRNOG00000018273	Ncl	92	72.700	Rattus_norvegicus
ENSCGRG00001022350	-	70	79.239	ENSRBIG00000035396	-	89	77.815	Rhinopithecus_bieti
ENSCGRG00001022350	-	95	63.418	ENSRBIG00000037525	-	92	65.145	Rhinopithecus_bieti
ENSCGRG00001022350	-	95	66.417	ENSRROG00000028756	-	84	79.098	Rhinopithecus_roxellana
ENSCGRG00001022350	-	99	64.583	ENSRROG00000036103	-	99	65.691	Rhinopithecus_roxellana
ENSCGRG00001022350	-	68	75.325	ENSSBOG00000027549	-	84	71.354	Saimiri_boliviensis_boliviensis
ENSCGRG00001022350	-	52	67.464	ENSSBOG00000023094	-	91	63.139	Saimiri_boliviensis_boliviensis
ENSCGRG00001022350	-	70	67.105	ENSTBEG00000001546	-	86	60.778	Tupaia_belangeri
ENSCGRG00001022350	-	72	64.796	ENSTBEG00000002469	-	69	64.796	Tupaia_belangeri
ENSCGRG00001022350	-	56	77.895	ENSTTRG00000009094	NCL	92	66.063	Tursiops_truncatus
ENSCGRG00001022350	-	88	65.763	ENSUAMG00000005639	NCL	76	78.646	Ursus_americanus
ENSCGRG00001022350	-	65	81.395	ENSVPAG00000001796	NCL	70	69.452	Vicugna_pacos
ENSCGRG00001022350	-	95	69.702	ENSVVUG00000025564	NCL	92	69.436	Vulpes_vulpes