EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00001022403 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Minus strand
Length: 1688 bases
Position: chrscaffold_9:52419947-52421634
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001024525	SAP	PF02037.27	5.5e-07	1	1
ENSCGRP00001024520	SAP	PF02037.27	5.8e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001028771	-	660	-	ENSCGRP00001024525	219 (aa)	-	-
ENSCGRT00001028766	-	669	-	ENSCGRP00001024520	222 (aa)	-	-

Gene Model

Click here to download ENSCGRG00001022403's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001022403's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00001022403	-	78	71.707	ENSCGRG00001018129	-	98	73.913
ENSCGRG00001022403	-	78	67.358	ENSCGRG00001013880	-	97	68.394

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001022403	-	78	69.756	ENSG00000205323	SARNP	98	71.498	Homo_sapiens
ENSCGRG00001022403	-	84	39.916	ENSAPOG00000005247	sarnp	96	40.678	Acanthochromis_polyacanthus
ENSCGRG00001022403	-	78	69.268	ENSAMEG00000011769	SARNP	98	71.498	Ailuropoda_melanoleuca
ENSCGRG00001022403	-	80	44.144	ENSAPEG00000016710	sarnp	99	46.226	Amphiprion_percula
ENSCGRG00001022403	-	79	47.196	ENSATEG00000024594	sarnp	99	45.581	Anabas_testudineus
ENSCGRG00001022403	-	79	59.524	ENSACAG00000015446	SARNP	98	59.524	Anolis_carolinensis
ENSCGRG00001022403	-	78	72.917	ENSANAG00000025021	-	97	74.479	Aotus_nancymaae
ENSCGRG00001022403	-	78	68.780	ENSANAG00000027405	-	98	70.531	Aotus_nancymaae
ENSCGRG00001022403	-	79	44.976	ENSACLG00000016479	sarnp	99	44.976	Astatotilapia_calliptera
ENSCGRG00001022403	-	80	43.694	ENSAMXG00000004834	sarnp	100	45.283	Astyanax_mexicanus
ENSCGRG00001022403	-	78	71.220	ENSBTAG00000020662	SARNP	98	71.014	Bos_taurus
ENSCGRG00001022403	-	56	64.968	ENSBTAG00000032446	-	79	64.375	Bos_taurus
ENSCGRG00001022403	-	78	68.780	ENSCJAG00000007853	-	98	70.531	Callithrix_jacchus
ENSCGRG00001022403	-	77	66.341	ENSCAFG00000023714	SARNP	97	68.780	Canis_familiaris
ENSCGRG00001022403	-	74	63.441	ENSCAFG00020026107	SARNP	91	66.129	Canis_lupus_dingo
ENSCGRG00001022403	-	79	68.528	ENSCHIG00000013335	-	98	69.543	Capra_hircus
ENSCGRG00001022403	-	78	64.767	ENSCHIG00000017443	-	97	60.396	Capra_hircus
ENSCGRG00001022403	-	78	70.244	ENSTSYG00000009225	SARNP	98	71.981	Carlito_syrichta
ENSCGRG00001022403	-	78	70.244	ENSCPOG00000011755	-	98	71.981	Cavia_porcellus
ENSCGRG00001022403	-	77	65.128	ENSCCAG00000030892	-	95	64.796	Cebus_capucinus
ENSCGRG00001022403	-	78	69.756	ENSCCAG00000019247	-	98	71.498	Cebus_capucinus
ENSCGRG00001022403	-	78	71.503	ENSCCAG00000004296	-	94	70.466	Cebus_capucinus
ENSCGRG00001022403	-	78	69.756	ENSCATG00000045088	SARNP	98	71.498	Cercocebus_atys
ENSCGRG00001022403	-	78	70.466	ENSCATG00000042076	-	95	72.539	Cercocebus_atys
ENSCGRG00001022403	-	78	69.756	ENSCLAG00000007774	-	98	71.498	Chinchilla_lanigera
ENSCGRG00001022403	-	78	69.756	ENSCSAG00000005303	SARNP	95	72.195	Chlorocebus_sabaeus
ENSCGRG00001022403	-	74	65.990	ENSCHOG00000005081	SARNP	99	66.667	Choloepus_hoffmanni
ENSCGRG00001022403	-	78	60.784	ENSCPBG00000012618	SARNP	98	63.768	Chrysemys_picta_bellii
ENSCGRG00001022403	-	78	69.756	ENSCANG00000027918	-	98	71.498	Colobus_angolensis_palliatus
ENSCGRG00001022403	-	97	94.222	ENSCGRG00000000109	-	93	94.222	Cricetulus_griseus_crigri
ENSCGRG00001022403	-	78	67.358	ENSCGRG00000004298	-	97	68.394	Cricetulus_griseus_crigri
ENSCGRG00001022403	-	78	71.707	ENSCGRG00000015182	-	98	73.913	Cricetulus_griseus_crigri
ENSCGRG00001022403	-	87	41.379	ENSCVAG00000010924	sarnp	100	45.755	Cyprinodon_variegatus
ENSCGRG00001022403	-	78	48.515	ENSDARG00000059357	sarnp	100	48.039	Danio_rerio
ENSCGRG00001022403	-	93	58.824	ENSDNOG00000014518	SARNP	98	71.498	Dasypus_novemcinctus
ENSCGRG00001022403	-	78	69.268	ENSDORG00000001065	-	98	71.014	Dipodomys_ordii
ENSCGRG00001022403	-	78	41.304	ENSEBUG00000016080	sarnp	96	39.674	Eptatretus_burgeri
ENSCGRG00001022403	-	78	70.244	ENSECAG00000000708	SARNP	98	71.981	Equus_caballus
ENSCGRG00001022403	-	80	44.651	ENSELUG00000020983	sarnp	100	45.581	Esox_lucius
ENSCGRG00001022403	-	81	46.047	ENSELUG00000006786	HCC1	99	45.540	Esox_lucius
ENSCGRG00001022403	-	78	69.268	ENSFCAG00000037076	SARNP	98	71.014	Felis_catus
ENSCGRG00001022403	-	70	53.439	ENSFALG00000000679	SARNP	73	55.080	Ficedula_albicollis
ENSCGRG00001022403	-	78	70.732	ENSFDAG00000007766	SARNP	98	72.464	Fukomys_damarensis
ENSCGRG00001022403	-	79	45.238	ENSFHEG00000012192	sarnp	99	45.238	Fundulus_heteroclitus
ENSCGRG00001022403	-	79	46.231	ENSGMOG00000011467	sarnp	99	46.231	Gadus_morhua
ENSCGRG00001022403	-	78	63.415	ENSGALG00000030342	SARNP	98	63.285	Gallus_gallus
ENSCGRG00001022403	-	79	43.333	ENSGAFG00000019183	sarnp	98	46.154	Gambusia_affinis
ENSCGRG00001022403	-	79	45.673	ENSGACG00000011615	sarnp	99	46.190	Gasterosteus_aculeatus
ENSCGRG00001022403	-	78	69.756	ENSGGOG00000013217	SARNP	98	71.498	Gorilla_gorilla
ENSCGRG00001022403	-	72	58.333	ENSGGOG00000041309	-	98	65.152	Gorilla_gorilla
ENSCGRG00001022403	-	79	45.455	ENSHBUG00000008761	sarnp	99	45.455	Haplochromis_burtoni
ENSCGRG00001022403	-	78	70.732	ENSHGLG00000016869	SARNP	98	72.464	Heterocephalus_glaber_female
ENSCGRG00001022403	-	78	70.732	ENSHGLG00100014657	SARNP	98	72.464	Heterocephalus_glaber_male
ENSCGRG00001022403	-	79	42.791	ENSHCOG00000015510	sarnp	99	43.256	Hippocampus_comes
ENSCGRG00001022403	-	80	48.558	ENSIPUG00000012503	Sarnp	100	48.780	Ictalurus_punctatus
ENSCGRG00001022403	-	78	70.732	ENSSTOG00000000283	SARNP	98	72.464	Ictidomys_tridecemlineatus
ENSCGRG00001022403	-	78	68.780	ENSJJAG00000001070	-	98	68.116	Jaculus_jaculus
ENSCGRG00001022403	-	73	64.211	ENSJJAG00000011057	-	90	64.211	Jaculus_jaculus
ENSCGRG00001022403	-	79	45.283	ENSKMAG00000013400	sarnp	99	45.283	Kryptolebias_marmoratus
ENSCGRG00001022403	-	80	44.601	ENSLBEG00000025038	sarnp	100	44.395	Labrus_bergylta
ENSCGRG00001022403	-	79	33.846	ENSLACG00000014810	-	99	36.585	Latimeria_chalumnae
ENSCGRG00001022403	-	75	52.525	ENSLACG00000018719	SARNP	88	53.030	Latimeria_chalumnae
ENSCGRG00001022403	-	80	48.598	ENSLOCG00000003621	sarnp	99	51.402	Lepisosteus_oculatus
ENSCGRG00001022403	-	78	70.244	ENSLAFG00000015053	SARNP	98	71.981	Loxodonta_africana
ENSCGRG00001022403	-	78	69.756	ENSMFAG00000045270	SARNP	98	71.498	Macaca_fascicularis
ENSCGRG00001022403	-	78	71.066	ENSMFAG00000032419	-	95	73.604	Macaca_fascicularis
ENSCGRG00001022403	-	78	68.473	ENSMMUG00000037731	-	98	70.244	Macaca_mulatta
ENSCGRG00001022403	-	78	69.756	ENSMMUG00000006289	-	98	71.498	Macaca_mulatta
ENSCGRG00001022403	-	78	69.756	ENSMNEG00000044633	-	98	71.498	Macaca_nemestrina
ENSCGRG00001022403	-	78	75.275	ENSMNEG00000030688	-	95	75.275	Macaca_nemestrina
ENSCGRG00001022403	-	79	68.137	ENSMNEG00000041520	-	96	70.352	Macaca_nemestrina
ENSCGRG00001022403	-	78	70.466	ENSMLEG00000037790	-	97	70.984	Mandrillus_leucophaeus
ENSCGRG00001022403	-	52	64.964	ENSMLEG00000038545	-	85	67.626	Mandrillus_leucophaeus
ENSCGRG00001022403	-	79	45.070	ENSMAMG00000005942	sarnp	99	45.540	Mastacembelus_armatus
ENSCGRG00001022403	-	79	45.455	ENSMZEG00005023533	sarnp	99	45.455	Maylandia_zebra
ENSCGRG00001022403	-	78	63.415	ENSMGAG00000001807	SARNP	98	63.285	Meleagris_gallopavo
ENSCGRG00001022403	-	78	70.244	ENSMAUG00000005256	-	98	72.464	Mesocricetus_auratus
ENSCGRG00001022403	-	78	70.588	ENSMICG00000010902	-	98	72.330	Microcebus_murinus
ENSCGRG00001022403	-	78	71.707	ENSMOCG00000006502	-	98	73.430	Microtus_ochrogaster
ENSCGRG00001022403	-	79	46.597	ENSMMOG00000013258	sarnp	99	46.316	Mola_mola
ENSCGRG00001022403	-	74	42.500	ENSMALG00000009106	sarnp	86	41.206	Monopterus_albus
ENSCGRG00001022403	-	78	73.659	MGP_CAROLIEiJ_G0015958	-	98	73.430	Mus_caroli
ENSCGRG00001022403	-	78	73.659	ENSMUSG00000078427	Sarnp	98	73.430	Mus_musculus
ENSCGRG00001022403	-	73	70.103	MGP_PahariEiJ_G0031126	-	98	72.680	Mus_pahari
ENSCGRG00001022403	-	78	73.659	MGP_SPRETEiJ_G0016783	-	98	73.430	Mus_spretus
ENSCGRG00001022403	-	78	69.756	ENSMPUG00000000885	SARNP	98	71.498	Mustela_putorius_furo
ENSCGRG00001022403	-	59	61.446	ENSMLUG00000003565	SARNP	98	64.458	Myotis_lucifugus
ENSCGRG00001022403	-	78	69.756	ENSNGAG00000010245	-	98	71.498	Nannospalax_galili
ENSCGRG00001022403	-	66	62.778	ENSNLEG00000017599	-	98	65.193	Nomascus_leucogenys
ENSCGRG00001022403	-	78	65.196	ENSMEUG00000014879	SARNP	98	64.878	Notamacropus_eugenii
ENSCGRG00001022403	-	78	54.412	ENSOPRG00000007733	SARNP	98	56.585	Ochotona_princeps
ENSCGRG00001022403	-	78	70.732	ENSODEG00000004608	-	98	72.464	Octodon_degus
ENSCGRG00001022403	-	72	68.023	ENSODEG00000012047	-	97	69.430	Octodon_degus
ENSCGRG00001022403	-	79	45.933	ENSONIG00000016523	sarnp	99	45.933	Oreochromis_niloticus
ENSCGRG00001022403	-	75	61.386	ENSOANG00000002882	SARNP	99	62.069	Ornithorhynchus_anatinus
ENSCGRG00001022403	-	78	68.447	ENSOCUG00000010117	SARNP	97	71.921	Oryctolagus_cuniculus
ENSCGRG00001022403	-	79	48.325	ENSORLG00000029565	sarnp	88	47.847	Oryzias_latipes
ENSCGRG00001022403	-	79	48.325	ENSORLG00015021649	sarnp	88	47.847	Oryzias_latipes_hsok
ENSCGRG00001022403	-	79	46.890	ENSOMEG00000014699	sarnp	99	46.445	Oryzias_melastigma
ENSCGRG00001022403	-	56	62.025	ENSOGAG00000001693	SARNP	94	65.190	Otolemur_garnettii
ENSCGRG00001022403	-	78	71.220	ENSOARG00000011218	SARNP	98	71.014	Ovis_aries
ENSCGRG00001022403	-	78	69.756	ENSPPAG00000039513	SARNP	98	71.498	Pan_paniscus
ENSCGRG00001022403	-	72	55.208	ENSPPAG00000042587	-	96	61.500	Pan_paniscus
ENSCGRG00001022403	-	78	69.268	ENSPPRG00000020704	SARNP	98	71.014	Panthera_pardus
ENSCGRG00001022403	-	72	55.208	ENSPTRG00000046696	-	96	61.500	Pan_troglodytes
ENSCGRG00001022403	-	78	69.756	ENSPTRG00000029747	SARNP	98	71.498	Pan_troglodytes
ENSCGRG00001022403	-	78	69.268	ENSPANG00000013149	-	98	71.014	Papio_anubis
ENSCGRG00001022403	-	78	70.984	ENSPANG00000006001	-	95	73.575	Papio_anubis
ENSCGRG00001022403	-	80	47.115	ENSPKIG00000002212	sarnp	100	49.065	Paramormyrops_kingsleyae
ENSCGRG00001022403	-	78	58.049	ENSPSIG00000002998	SARNP	99	61.376	Pelodiscus_sinensis
ENSCGRG00001022403	-	78	70.732	ENSPEMG00000000923	-	98	72.947	Peromyscus_maniculatus_bairdii
ENSCGRG00001022403	-	79	37.559	ENSPMAG00000009808	sarnp	95	37.559	Petromyzon_marinus
ENSCGRG00001022403	-	74	66.162	ENSPCIG00000024663	SARNP	98	68.687	Phascolarctos_cinereus
ENSCGRG00001022403	-	79	44.292	ENSPFOG00000013517	sarnp	98	45.933	Poecilia_formosa
ENSCGRG00001022403	-	79	43.578	ENSPLAG00000017096	sarnp	98	46.154	Poecilia_latipinna
ENSCGRG00001022403	-	79	43.119	ENSPMEG00000014306	sarnp	98	46.154	Poecilia_mexicana
ENSCGRG00001022403	-	73	44.693	ENSPREG00000019598	sarnp	82	43.915	Poecilia_reticulata
ENSCGRG00001022403	-	78	69.756	ENSPPYG00000004630	SARNP	98	71.498	Pongo_abelii
ENSCGRG00001022403	-	80	46.890	ENSPNAG00000000975	sarnp	100	47.368	Pygocentrus_nattereri
ENSCGRG00001022403	-	78	71.707	ENSRNOG00000030520	Sarnp	98	73.430	Rattus_norvegicus
ENSCGRG00001022403	-	78	62.019	ENSRBIG00000026928	-	95	64.904	Rhinopithecus_bieti
ENSCGRG00001022403	-	78	66.667	ENSRBIG00000037388	-	94	66.845	Rhinopithecus_bieti
ENSCGRG00001022403	-	79	64.593	ENSRBIG00000019503	-	95	69.697	Rhinopithecus_bieti
ENSCGRG00001022403	-	78	69.756	ENSRBIG00000039295	-	98	71.498	Rhinopithecus_bieti
ENSCGRG00001022403	-	78	62.019	ENSRROG00000044575	-	95	64.904	Rhinopithecus_roxellana
ENSCGRG00001022403	-	78	69.756	ENSRROG00000035177	-	98	71.498	Rhinopithecus_roxellana
ENSCGRG00001022403	-	78	69.756	ENSSBOG00000035337	-	98	71.498	Saimiri_boliviensis_boliviensis
ENSCGRG00001022403	-	78	62.312	ENSSBOG00000022787	-	95	61.340	Saimiri_boliviensis_boliviensis
ENSCGRG00001022403	-	78	67.317	ENSSBOG00000028635	-	96	69.082	Saimiri_boliviensis_boliviensis
ENSCGRG00001022403	-	78	67.805	ENSSHAG00000008865	SARNP	98	69.565	Sarcophilus_harrisii
ENSCGRG00001022403	-	80	45.740	ENSSFOG00015020709	sarnp	100	46.188	Scleropages_formosus
ENSCGRG00001022403	-	79	45.238	ENSSMAG00000018587	sarnp	99	45.238	Scophthalmus_maximus
ENSCGRG00001022403	-	79	46.919	ENSSDUG00000005484	sarnp	99	47.143	Seriola_dumerili
ENSCGRG00001022403	-	79	46.919	ENSSLDG00000003775	sarnp	99	47.143	Seriola_lalandi_dorsalis
ENSCGRG00001022403	-	78	55.122	ENSSARG00000004858	SARNP	98	55.072	Sorex_araneus
ENSCGRG00001022403	-	75	50.785	ENSSPUG00000015135	SARNP	96	49.468	Sphenodon_punctatus
ENSCGRG00001022403	-	78	70.244	ENSSSCG00000000364	SARNP	98	71.981	Sus_scrofa
ENSCGRG00001022403	-	73	53.571	ENSTGUG00000016126	SARNP	98	54.922	Taeniopygia_guttata
ENSCGRG00001022403	-	79	43.192	ENSTRUG00000009497	-	99	45.714	Takifugu_rubripes
ENSCGRG00001022403	-	79	42.273	ENSTNIG00000012432	sarnp	99	42.130	Tetraodon_nigroviridis
ENSCGRG00001022403	-	77	73.438	ENSTTRG00000009735	SARNP	96	76.042	Tursiops_truncatus
ENSCGRG00001022403	-	59	57.576	ENSUAMG00000015093	-	86	60.479	Ursus_americanus
ENSCGRG00001022403	-	73	69.072	ENSVPAG00000009515	SARNP	98	71.649	Vicugna_pacos
ENSCGRG00001022403	-	78	69.268	ENSVVUG00000022779	SARNP	98	71.014	Vulpes_vulpes
ENSCGRG00001022403	-	79	54.327	ENSXETG00000024657	sarnp	99	54.327	Xenopus_tropicalis
ENSCGRG00001022403	-	79	44.286	ENSXMAG00000009356	sarnp	98	46.635	Xiphophorus_maculatus