EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCGRG00001022514 (Gene tree)
Gene ID: -
Gene Symbol: Snd1
Alias: Tudor-SN|p100 co-activator
Full Name: staphylococcal nuclease and tudor domain containing 1
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Plus strand
Length: 432672 bases
Position: chrscaffold_14:30207886-30640557
Accession: 1929266
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001024728	TUDOR	PF00567.24	2.5e-28	1	1
ENSCGRP00001024746	TUDOR	PF00567.24	2.6e-28	1	1
ENSCGRP00001024746	SNase	PF00565.17	1.4e-68	1	5
ENSCGRP00001024746	SNase	PF00565.17	1.4e-68	2	5
ENSCGRP00001024746	SNase	PF00565.17	1.4e-68	3	5
ENSCGRP00001024746	SNase	PF00565.17	1.4e-68	4	5
ENSCGRP00001024746	SNase	PF00565.17	1.4e-68	5	5
ENSCGRP00001024728	SNase	PF00565.17	4.8e-62	1	4
ENSCGRP00001024728	SNase	PF00565.17	4.8e-62	2	4
ENSCGRP00001024728	SNase	PF00565.17	4.8e-62	3	4
ENSCGRP00001024728	SNase	PF00565.17	4.8e-62	4	4
ENSCGRP00001024740	SNase	PF00565.17	1.9e-48	1	3
ENSCGRP00001024740	SNase	PF00565.17	1.9e-48	2	3
ENSCGRP00001024740	SNase	PF00565.17	1.9e-48	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001028974	-	3321	-	ENSCGRP00001024728	887 (aa)	-	-
ENSCGRT00001028986	-	1827	-	ENSCGRP00001024740	608 (aa)	-	-
ENSCGRT00001028992	-	2733	-	ENSCGRP00001024746	910 (aa)	-	-

Gene Model

Click here to download ENSCGRG00001022514's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001022514's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001022514	Snd1	100	97.033	ENSG00000197157	SND1	100	97.033	Homo_sapiens
ENSCGRG00001022514	Snd1	100	83.443	ENSAPOG00000017599	snd1	99	84.205	Acanthochromis_polyacanthus
ENSCGRG00001022514	Snd1	100	96.930	ENSAMEG00000004664	SND1	94	96.930	Ailuropoda_melanoleuca
ENSCGRG00001022514	Snd1	98	81.859	ENSACIG00000003551	snd1	99	81.737	Amphilophus_citrinellus
ENSCGRG00001022514	Snd1	100	83.333	ENSAOCG00000014166	snd1	99	84.093	Amphiprion_ocellaris
ENSCGRG00001022514	Snd1	100	83.333	ENSAPEG00000007067	snd1	99	84.093	Amphiprion_percula
ENSCGRG00001022514	Snd1	98	85.403	ENSATEG00000018475	snd1	88	83.808	Anabas_testudineus
ENSCGRG00001022514	Snd1	100	97.473	ENSANAG00000034463	SND1	100	97.473	Aotus_nancymaae
ENSCGRG00001022514	Snd1	100	83.114	ENSACLG00000022897	snd1	99	83.853	Astatotilapia_calliptera
ENSCGRG00001022514	Snd1	98	85.284	ENSAMXG00000016318	snd1	98	84.410	Astyanax_mexicanus
ENSCGRG00001022514	Snd1	100	97.363	ENSBTAG00000010692	SND1	100	97.363	Bos_taurus
ENSCGRG00001022514	Snd1	98	50.741	WBGene00006626	tsn-1	98	46.872	Caenorhabditis_elegans
ENSCGRG00001022514	Snd1	100	97.033	ENSCJAG00000017668	SND1	100	97.033	Callithrix_jacchus
ENSCGRG00001022514	Snd1	100	97.253	ENSCAFG00000001700	SND1	100	97.253	Canis_familiaris
ENSCGRG00001022514	Snd1	100	97.253	ENSCAFG00020021639	SND1	100	97.253	Canis_lupus_dingo
ENSCGRG00001022514	Snd1	100	97.473	ENSCHIG00000023390	SND1	100	97.473	Capra_hircus
ENSCGRG00001022514	Snd1	93	97.535	ENSTSYG00000004979	SND1	96	97.711	Carlito_syrichta
ENSCGRG00001022514	Snd1	98	84.263	ENSCAPG00000010677	SND1	98	84.263	Cavia_aperea
ENSCGRG00001022514	Snd1	100	97.033	ENSCPOG00000006251	SND1	100	97.033	Cavia_porcellus
ENSCGRG00001022514	Snd1	100	97.363	ENSCCAG00000036847	SND1	100	97.363	Cebus_capucinus
ENSCGRG00001022514	Snd1	100	97.253	ENSCATG00000035214	SND1	100	97.253	Cercocebus_atys
ENSCGRG00001022514	Snd1	100	97.143	ENSCLAG00000011796	SND1	100	97.143	Chinchilla_lanigera
ENSCGRG00001022514	Snd1	100	97.253	ENSCSAG00000010182	SND1	100	97.253	Chlorocebus_sabaeus
ENSCGRG00001022514	Snd1	79	90.196	ENSCHOG00000002218	SND1	86	90.196	Choloepus_hoffmanni
ENSCGRG00001022514	Snd1	100	90.549	ENSCPBG00000018094	SND1	98	91.480	Chrysemys_picta_bellii
ENSCGRG00001022514	Snd1	95	61.670	ENSCING00000000524	-	98	56.748	Ciona_intestinalis
ENSCGRG00001022514	Snd1	97	62.606	ENSCSAVG00000008807	-	99	57.854	Ciona_savignyi
ENSCGRG00001022514	Snd1	100	97.253	ENSCANG00000035119	SND1	100	97.253	Colobus_angolensis_palliatus
ENSCGRG00001022514	Snd1	97	100.000	ENSCGRG00000012277	Snd1	99	100.000	Cricetulus_griseus_crigri
ENSCGRG00001022514	Snd1	98	85.235	ENSCSEG00000008661	snd1	98	83.781	Cynoglossus_semilaevis
ENSCGRG00001022514	Snd1	97	86.633	ENSCVAG00000010316	snd1	100	83.103	Cyprinodon_variegatus
ENSCGRG00001022514	Snd1	98	86.097	ENSDARG00000006766	snd1	97	87.230	Danio_rerio
ENSCGRG00001022514	Snd1	97	94.476	ENSDNOG00000006795	SND1	100	94.476	Dasypus_novemcinctus
ENSCGRG00001022514	Snd1	100	97.802	ENSDORG00000000336	Snd1	100	97.802	Dipodomys_ordii
ENSCGRG00001022514	Snd1	96	53.731	FBgn0035121	Tudor-SN	98	50.811	Drosophila_melanogaster
ENSCGRG00001022514	Snd1	90	100.000	ENSETEG00000000375	SND1	92	100.000	Echinops_telfairi
ENSCGRG00001022514	Snd1	86	65.544	ENSEBUG00000014201	-	84	76.503	Eptatretus_burgeri
ENSCGRG00001022514	Snd1	99	96.921	ENSEASG00005008513	SND1	100	95.680	Equus_asinus_asinus
ENSCGRG00001022514	Snd1	100	97.253	ENSECAG00000011451	SND1	100	97.253	Equus_caballus
ENSCGRG00001022514	Snd1	99	95.953	ENSEEUG00000014737	SND1	99	86.288	Erinaceus_europaeus
ENSCGRG00001022514	Snd1	98	83.110	ENSELUG00000001805	snd1	95	82.832	Esox_lucius
ENSCGRG00001022514	Snd1	100	97.253	ENSFCAG00000008289	SND1	100	97.253	Felis_catus
ENSCGRG00001022514	Snd1	100	97.143	ENSFDAG00000015881	SND1	100	97.143	Fukomys_damarensis
ENSCGRG00001022514	Snd1	97	86.125	ENSFHEG00000004093	snd1	97	84.051	Fundulus_heteroclitus
ENSCGRG00001022514	Snd1	72	73.446	ENSGMOG00000018932	snd1	64	73.446	Gadus_morhua
ENSCGRG00001022514	Snd1	53	94.475	ENSGALG00000052684	-	50	92.513	Gallus_gallus
ENSCGRG00001022514	Snd1	98	85.738	ENSGAFG00000008421	snd1	99	84.555	Gambusia_affinis
ENSCGRG00001022514	Snd1	100	53.905	ENSGACG00000019793	snd1	98	54.365	Gasterosteus_aculeatus
ENSCGRG00001022514	Snd1	100	97.253	ENSGGOG00000009614	SND1	100	97.253	Gorilla_gorilla
ENSCGRG00001022514	Snd1	99	83.150	ENSHBUG00000019135	snd1	99	83.853	Haplochromis_burtoni
ENSCGRG00001022514	Snd1	100	96.813	ENSHGLG00000003618	SND1	100	96.813	Heterocephalus_glaber_female
ENSCGRG00001022514	Snd1	99	96.354	ENSHGLG00100012449	SND1	100	96.354	Heterocephalus_glaber_male
ENSCGRG00001022514	Snd1	98	84.732	ENSHCOG00000005266	snd1	98	83.557	Hippocampus_comes
ENSCGRG00001022514	Snd1	98	85.117	ENSIPUG00000013279	snd1	98	83.315	Ictalurus_punctatus
ENSCGRG00001022514	Snd1	100	97.582	ENSSTOG00000002140	SND1	100	97.582	Ictidomys_tridecemlineatus
ENSCGRG00001022514	Snd1	100	97.802	ENSJJAG00000009561	Snd1	100	97.802	Jaculus_jaculus
ENSCGRG00001022514	Snd1	98	85.570	ENSKMAG00000016997	snd1	98	84.452	Kryptolebias_marmoratus
ENSCGRG00001022514	Snd1	100	84.732	ENSLBEG00000013563	snd1	99	82.981	Labrus_bergylta
ENSCGRG00001022514	Snd1	99	84.675	ENSLOCG00000015537	snd1	98	84.675	Lepisosteus_oculatus
ENSCGRG00001022514	Snd1	100	96.484	ENSLAFG00000009696	SND1	100	96.484	Loxodonta_africana
ENSCGRG00001022514	Snd1	100	97.253	ENSMFAG00000038114	SND1	100	97.253	Macaca_fascicularis
ENSCGRG00001022514	Snd1	100	97.253	ENSMMUG00000015432	SND1	100	97.253	Macaca_mulatta
ENSCGRG00001022514	Snd1	100	97.253	ENSMNEG00000039808	SND1	100	97.288	Macaca_nemestrina
ENSCGRG00001022514	Snd1	100	97.143	ENSMLEG00000029040	SND1	100	97.175	Mandrillus_leucophaeus
ENSCGRG00001022514	Snd1	97	86.464	ENSMAMG00000011739	snd1	98	84.263	Mastacembelus_armatus
ENSCGRG00001022514	Snd1	100	83.114	ENSMZEG00005005681	snd1	99	83.853	Maylandia_zebra
ENSCGRG00001022514	Snd1	100	97.363	ENSMICG00000000097	SND1	100	97.363	Microcebus_murinus
ENSCGRG00001022514	Snd1	100	98.791	ENSMOCG00000005040	Snd1	100	98.791	Microtus_ochrogaster
ENSCGRG00001022514	Snd1	100	83.224	ENSMMOG00000001795	snd1	99	84.093	Mola_mola
ENSCGRG00001022514	Snd1	99	94.426	ENSMODG00000015182	SND1	99	94.426	Monodelphis_domestica
ENSCGRG00001022514	Snd1	98	85.235	ENSMALG00000012071	snd1	98	83.817	Monopterus_albus
ENSCGRG00001022514	Snd1	100	98.352	MGP_CAROLIEiJ_G0028159	Snd1	100	98.352	Mus_caroli
ENSCGRG00001022514	Snd1	100	98.132	ENSMUSG00000001424	Snd1	100	98.132	Mus_musculus
ENSCGRG00001022514	Snd1	100	98.571	MGP_PahariEiJ_G0021917	Snd1	100	98.651	Mus_pahari
ENSCGRG00001022514	Snd1	100	98.352	MGP_SPRETEiJ_G0029159	Snd1	100	98.352	Mus_spretus
ENSCGRG00001022514	Snd1	100	97.253	ENSMPUG00000006545	SND1	100	97.253	Mustela_putorius_furo
ENSCGRG00001022514	Snd1	97	95.866	ENSMLUG00000017130	SND1	99	95.866	Myotis_lucifugus
ENSCGRG00001022514	Snd1	100	98.022	ENSNGAG00000011186	Snd1	100	98.022	Nannospalax_galili
ENSCGRG00001022514	Snd1	100	83.004	ENSNBRG00000006681	snd1	99	83.742	Neolamprologus_brichardi
ENSCGRG00001022514	Snd1	100	97.143	ENSNLEG00000012263	SND1	100	97.288	Nomascus_leucogenys
ENSCGRG00001022514	Snd1	91	100.000	ENSOPRG00000013405	SND1	91	100.000	Ochotona_princeps
ENSCGRG00001022514	Snd1	100	97.143	ENSODEG00000011502	SND1	100	97.143	Octodon_degus
ENSCGRG00001022514	Snd1	100	83.004	ENSONIG00000011481	snd1	96	83.742	Oreochromis_niloticus
ENSCGRG00001022514	Snd1	98	93.468	ENSOANG00000000817	SND1	99	92.865	Ornithorhynchus_anatinus
ENSCGRG00001022514	Snd1	100	96.044	ENSOCUG00000001620	SND1	99	96.210	Oryctolagus_cuniculus
ENSCGRG00001022514	Snd1	95	87.197	ENSORLG00000015201	snd1	98	83.575	Oryzias_latipes
ENSCGRG00001022514	Snd1	95	87.197	ENSORLG00020013991	snd1	98	83.687	Oryzias_latipes_hni
ENSCGRG00001022514	Snd1	95	87.197	ENSORLG00015012436	snd1	98	83.687	Oryzias_latipes_hsok
ENSCGRG00001022514	Snd1	98	85.067	ENSOMEG00000006406	snd1	98	84.116	Oryzias_melastigma
ENSCGRG00001022514	Snd1	100	96.930	ENSOGAG00000013356	SND1	94	96.930	Otolemur_garnettii
ENSCGRG00001022514	Snd1	97	94.802	ENSOARG00000002149	SND1	100	94.802	Ovis_aries
ENSCGRG00001022514	Snd1	100	97.143	ENSPPAG00000042947	SND1	100	97.143	Pan_paniscus
ENSCGRG00001022514	Snd1	100	97.253	ENSPPRG00000004494	SND1	100	97.253	Panthera_pardus
ENSCGRG00001022514	Snd1	100	97.143	ENSPTIG00000014214	SND1	100	97.143	Panthera_tigris_altaica
ENSCGRG00001022514	Snd1	100	97.143	ENSPTRG00000023911	SND1	100	97.143	Pan_troglodytes
ENSCGRG00001022514	Snd1	98	97.980	ENSPANG00000011997	SND1	99	97.285	Papio_anubis
ENSCGRG00001022514	Snd1	96	83.980	ENSPKIG00000023494	snd1	98	81.354	Paramormyrops_kingsleyae
ENSCGRG00001022514	Snd1	94	82.854	ENSPMGG00000003629	snd1	100	82.635	Periophthalmus_magnuspinnatus
ENSCGRG00001022514	Snd1	100	99.011	ENSPEMG00000010240	Snd1	100	99.011	Peromyscus_maniculatus_bairdii
ENSCGRG00001022514	Snd1	94	79.510	ENSPMAG00000007915	-	99	73.446	Petromyzon_marinus
ENSCGRG00001022514	Snd1	99	94.426	ENSPCIG00000011561	SND1	99	94.426	Phascolarctos_cinereus
ENSCGRG00001022514	Snd1	98	85.403	ENSPFOG00000001557	snd1	99	83.982	Poecilia_formosa
ENSCGRG00001022514	Snd1	98	85.570	ENSPLAG00000018459	snd1	96	83.982	Poecilia_latipinna
ENSCGRG00001022514	Snd1	98	85.906	ENSPMEG00000006803	snd1	99	84.427	Poecilia_mexicana
ENSCGRG00001022514	Snd1	98	85.906	ENSPREG00000002189	snd1	99	84.316	Poecilia_reticulata
ENSCGRG00001022514	Snd1	98	98.148	ENSPPYG00000017972	SND1	98	97.226	Pongo_abelii
ENSCGRG00001022514	Snd1	100	85.275	ENSPCAG00000011305	SND1	99	85.284	Procavia_capensis
ENSCGRG00001022514	Snd1	100	97.033	ENSPCOG00000026791	SND1	100	97.062	Propithecus_coquereli
ENSCGRG00001022514	Snd1	100	95.385	ENSPVAG00000013945	SND1	100	95.385	Pteropus_vampyrus
ENSCGRG00001022514	Snd1	100	83.114	ENSPNYG00000000932	snd1	99	83.853	Pundamilia_nyererei
ENSCGRG00001022514	Snd1	98	85.452	ENSPNAG00000001206	snd1	98	84.111	Pygocentrus_nattereri
ENSCGRG00001022514	Snd1	99	97.797	ENSRNOG00000031173	Snd1	99	97.797	Rattus_norvegicus
ENSCGRG00001022514	Snd1	95	97.744	ENSRBIG00000027782	-	93	97.909	Rhinopithecus_bieti
ENSCGRG00001022514	Snd1	100	97.253	ENSRROG00000033020	SND1	100	97.253	Rhinopithecus_roxellana
ENSCGRG00001022514	Snd1	100	97.363	ENSSBOG00000032461	SND1	100	97.363	Saimiri_boliviensis_boliviensis
ENSCGRG00001022514	Snd1	98	91.329	ENSSHAG00000015359	SND1	100	91.329	Sarcophilus_harrisii
ENSCGRG00001022514	Snd1	100	81.828	ENSSFOG00015001103	snd1	98	82.908	Scleropages_formosus
ENSCGRG00001022514	Snd1	98	83.669	ENSSMAG00000001932	snd1	93	83.408	Scophthalmus_maximus
ENSCGRG00001022514	Snd1	100	83.224	ENSSDUG00000002699	snd1	92	84.093	Seriola_dumerili
ENSCGRG00001022514	Snd1	100	75.987	ENSSLDG00000001950	snd1	98	76.752	Seriola_lalandi_dorsalis
ENSCGRG00001022514	Snd1	88	98.113	ENSSARG00000004877	SND1	92	98.113	Sorex_araneus
ENSCGRG00001022514	Snd1	94	85.962	ENSSPUG00000017586	SND1	96	86.087	Sphenodon_punctatus
ENSCGRG00001022514	Snd1	98	84.264	ENSSPAG00000021398	snd1	96	86.213	Stegastes_partitus
ENSCGRG00001022514	Snd1	100	96.923	ENSSSCG00000016590	SND1	100	96.923	Sus_scrofa
ENSCGRG00001022514	Snd1	97	86.429	ENSTRUG00000014067	snd1	98	83.333	Takifugu_rubripes
ENSCGRG00001022514	Snd1	100	84.477	ENSTNIG00000011019	snd1	97	85.473	Tetraodon_nigroviridis
ENSCGRG00001022514	Snd1	96	91.745	ENSTBEG00000003999	SND1	100	91.745	Tupaia_belangeri
ENSCGRG00001022514	Snd1	100	92.637	ENSTTRG00000006059	SND1	100	92.637	Tursiops_truncatus
ENSCGRG00001022514	Snd1	91	87.597	ENSUAMG00000002820	-	86	88.441	Ursus_americanus
ENSCGRG00001022514	Snd1	86	97.148	ENSUAMG00000005604	-	93	97.148	Ursus_americanus
ENSCGRG00001022514	Snd1	100	97.143	ENSUMAG00000005960	SND1	100	97.143	Ursus_maritimus
ENSCGRG00001022514	Snd1	93	86.243	ENSVPAG00000008302	SND1	74	100.000	Vicugna_pacos
ENSCGRG00001022514	Snd1	100	97.033	ENSVVUG00000007226	SND1	100	97.033	Vulpes_vulpes
ENSCGRG00001022514	Snd1	93	90.493	ENSXETG00000023043	snd1	100	83.982	Xenopus_tropicalis
ENSCGRG00001022514	Snd1	91	86.980	ENSXCOG00000013629	snd1	99	80.879	Xiphophorus_couchianus
ENSCGRG00001022514	Snd1	98	85.738	ENSXMAG00000011469	snd1	99	84.538	Xiphophorus_maculatus